; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019593 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019593
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCytochrome c oxidase subunit 5C
Genome locationChr04:23569417..23569602
RNA-Seq ExpressionHG10019593
SyntenyHG10019593
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA20754.1 Cytochrome c oxidase subunit Vc [Macleaya cordata]8.0e-1979.63Show/hide
Query:  YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        YKGPSIIKEIMYG  LGL+AGGLWKMHHWNNQRRTKEFY+LL++GDI+VV++++
Subjt:  YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

XP_022935291.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata]3.9e-2183.61Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        MVG V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

XP_022983411.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima]6.6e-2183.61Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        MVG+V  YKGPS IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

XP_023528587.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo]2.3e-2183.61Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        MVG+V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

XP_038906018.1 putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida]1.8e-2388.52Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        MVG VA YKGPSIIKEI+YG G+GLMAGGLWKMHHWN QR+TKEFYELLDRGDITVVIQED
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

TrEMBL top hitse value%identityAlignment
A0A200RDF8 Cytochrome c oxidase subunit Vc3.9e-1979.63Show/hide
Query:  YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        YKGPSIIKEIMYG  LGL+AGGLWKMHHWNNQRRTKEFY+LL++GDI+VV++++
Subjt:  YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

A0A2C9U871 Cytochrome c oxidase subunit 5C5.6e-1871.67Show/hide
Query:  VGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        V HV  YKGPSI+KEI+YG  LGL AGGLWKM+HWNNQRR KEFY+LL+RG+I+VV++E+
Subjt:  VGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

A0A6J1F554 putative cytochrome c oxidase subunit 5C-41.9e-2183.61Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        MVG V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

A0A6J1IZ83 putative cytochrome c oxidase subunit 5C-43.2e-2183.61Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        MVG+V  YKGPS IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDRGDITVV+ ED
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

A0A7J7MRD1 Uncharacterized protein4.3e-1875Show/hide
Query:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        A YKG S+IKEI YG  LGL AGGLWKMHHWNNQRRTKEFY+LL++GDI+VV+++D
Subjt:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

SwissProt top hitse value%identityAlignment
O22912 Probable cytochrome c oxidase subunit 5C-14.6e-1759.38Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE+  G  LGL AGGLWKMHHWN QR+T+ FY+LL+RG+I+VV  E+
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

P19173 Cytochrome c oxidase subunit 5C6.4e-1963.93Show/hide
Query:  GHVAN--YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        GHVA+  YKGPS++KE++ G  LGL+AGG WKMHHWN+QRRTKEFY++L++G I+VV  E+
Subjt:  GHVAN--YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

Q8VY39 Cytochrome c oxidase subunit 5C-23.5e-1760.66Show/hide
Query:  GHVAN--YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        G VA+   KGPS++KE++ GT LGL AGGLWKMHHWN QR+T+ FY+LL++G+I+VV+ E+
Subjt:  GHVAN--YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

Q9FLK2 Probable cytochrome c oxidase subunit 5C-36.0e-1759.38Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

Q9FNE0 Putative cytochrome c oxidase subunit 5C-41.3e-1967.86Show/hide
Query:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        A YKGPS++KEI+YG  LG   GGLWKMHHWNNQRRTKEFY+LL++G+I+VV++++
Subjt:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein3.3e-1859.38Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE+  G  LGL AGGLWKMHHWN QR+T+ FY+LL+RG+I+VV  E+
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

AT5G40382.1 Cytochrome c oxidase subunit Vc family protein9.1e-2167.86Show/hide
Query:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        A YKGPS++KEI+YG  LG   GGLWKMHHWNNQRRTKEFY+LL++G+I+VV++++
Subjt:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein4.2e-1859.38Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein4.2e-1859.38Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein4.2e-1859.38Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+RG+I VV+ E+
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCCATGTTGCAAATTACAAGGGACCAAGCATAATAAAGGAGATAATGTATGGAACGGGGCTTGGCCTAATGGCTGGTGGCCTTTGGAAAATGCACCATTGGAA
TAATCAAAGGAGAACCAAAGAGTTCTATGAGTTGCTTGATCGAGGTGATATCACTGTTGTGATTCAAGAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGCCATGTTGCAAATTACAAGGGACCAAGCATAATAAAGGAGATAATGTATGGAACGGGGCTTGGCCTAATGGCTGGTGGCCTTTGGAAAATGCACCATTGGAA
TAATCAAAGGAGAACCAAAGAGTTCTATGAGTTGCTTGATCGAGGTGATATCACTGTTGTGATTCAAGAAGACTGA
Protein sequenceShow/hide protein sequence
MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDRGDITVVIQED