; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019602 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019602
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPeptide deformylase
Genome locationChr04:23663085..23670220
RNA-Seq ExpressionHG10019602
SyntenyHG10019602
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0018206 - peptidyl-methionine modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042586 - peptide deformylase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR023635 - Peptide deformylase
IPR036821 - Peptide deformylase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152139.1 peptide deformylase 1B, chloroplastic [Momordica charantia]2.6e-13289.74Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLHLSL HA LP   RRLALPAVFRRL+ F ST +FFSHSSK RPPSTLVYAQAKRGFSAKEDD A S DLEFEAPLKIVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV+EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRV+RYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRT-RKVAAGFG
        MVNLSGLPARVFQHEFDHLQGILFFDRMTDEV+DTIR QLQALEKKYE++TGLPSPERIENFRT +KVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRT-RKVAAGFG

XP_022928203.1 peptide deformylase 1B, chloroplastic [Cucurbita moschata]1.4e-13389.45Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLHLSLPHA LPT+SRR ALPAV RRL+ F STG+  S+SSKFRPP+TLVYAQAKRGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTVLFNEGCLSFP IYADV+RPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEV+DTIRPQLQALEKKYED+TGLPSPERIEN RTR KVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS

XP_022989167.1 peptide deformylase 1B, chloroplastic [Cucurbita maxima]6.1e-13489.09Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLH+SLPHA LPT+SRR ALPAV RRL+ F STG+  S+SSKFRPP+TLVYAQAKRGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKT+LFNEGCLSFPRIYADV+RPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEV+DTIRPQLQALEKKYED+TGLPSPERIEN RTR KVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS

XP_023530509.1 peptide deformylase 1B, chloroplastic [Cucurbita pepo subsp. pepo]8.8e-13389.09Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLHLSLPHA LPT+SRR ALP V RRL+ F STG+  S+SSKFRPP+TLVYAQAKRGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTVLFNEGCLSFPRIYADV+RPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEV+DTIRPQLQALEKKYED+TGL SPERIEN RTR KVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS

XP_038904020.1 peptide deformylase 1B, chloroplastic [Benincasa hispida]2.6e-14093.8Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M Y TRLHLSL HA LPTVSRRL+LPAVFRRL+ FP TGKFFSH SKFRPPST+VYAQAKRGFSAKEDDVA SVDLEFEAPLKIVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFP IYADVERPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS
        M NLSGLPARVFQHEFDHLQGILFFDRMTDEV+DTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS

TrEMBL top hitse value%identityAlignment
A0A0A0LG66 Peptide deformylase3.1e-13189.42Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+YATRLH+SLPHA LPTVS  L+ PAVFRRL+ F ST K FSHSSKF+ PSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPD ILRAKNKRI 
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFN VGERGEGEEIVLVNP+VYRYSKKTVLFNEGCLSFP IYADVERPES+KIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS
        MVNLSGL ARVFQHEFDHLQG LFFDRMTDEV++TIRPQLQALEKKYED+TGLPSPERIENFR RKV AGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS

A0A1S3B8C2 Peptide deformylase1.7e-12988.69Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y TRLH+SLP A LPTVS  L+ P VFRRL+ F ST    SHSSKFR PSTLVYAQAKRGF AKEDDVASSVDLEFEAPLKIVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTV FNEGCLSFP IYADVERPES+KIDARDI GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS
        MVNLSGL ARVFQHEFDHLQGILFFDRMTDEV++TIRPQLQALEKKYED+TGLPSPERIENFR RKVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS

A0A6J1DF55 Peptide deformylase1.2e-13289.74Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLHLSL HA LP   RRLALPAVFRRL+ F ST +FFSHSSK RPPSTLVYAQAKRGFSAKEDD A S DLEFEAPLKIVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV+EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRV+RYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRT-RKVAAGFG
        MVNLSGLPARVFQHEFDHLQGILFFDRMTDEV+DTIR QLQALEKKYE++TGLPSPERIENFRT +KVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRT-RKVAAGFG

A0A6J1EN89 Peptide deformylase6.6e-13489.45Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLHLSLPHA LPT+SRR ALPAV RRL+ F STG+  S+SSKFRPP+TLVYAQAKRGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTVLFNEGCLSFP IYADV+RPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEV+DTIRPQLQALEKKYED+TGLPSPERIEN RTR KVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS

A0A6J1JF23 Peptide deformylase3.0e-13489.09Show/hide
Query:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID
        M+Y  RLH+SLPHA LPT+SRR ALPAV RRL+ F STG+  S+SSKFRPP+TLVYAQAKRGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRID
Subjt:  MSYATRLHLSLPHA-LPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRID

Query:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKT+LFNEGCLSFPRIYADV+RPESVKIDARDI+GTRF
Subjt:  SFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEV+DTIRPQLQALEKKYED+TGLPSPERIEN RTR KVAAGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTR-KVAAGFGKS

SwissProt top hitse value%identityAlignment
Q5VNN5 Peptide deformylase 1B, chloroplastic3.1e-8062.29Show/hide
Query:  SKFRPPSTLVYAQAKRGFS--------AKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLM
        S+    + L  A+A+RGF         A+++D A++ DL+FE PLK+V+YPD ILRA+NKRI++FDDNL+ L  EMFDVMYKTDGIGLSAPQVGVNVQLM
Subjt:  SKFRPPSTLVYAQAKRGFS--------AKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLM

Query:  VFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIR
        VFNP G +GEGEEIVLVNP VY+ SK+ +++ EGCLSFP IYA+V RP++VKIDA+D+ G +  V LSGL ARVFQHEFDHLQGILFFDRM+ +V++++R
Subjt:  VFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIR

Query:  PQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK
          L+ LEKKYE+ TGL SPE IEN++ RK    F +
Subjt:  PQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK

Q7NIF5 Peptide deformylase 22.4e-3243.75Show/hide
Query:  PLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYA
        PL I    D +LR  +K+I   +D ++KL  +M   MY  DGIGL+APQVGVN +++V +   E      +VL+NP + ++S    +  EGCLS P IYA
Subjt:  PLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYA

Query:  DVERPESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQL
        DV RPE V    RD+NG    +  +GL AR  QHE DHL G+LF DR+ +++   + PQL
Subjt:  DVERPESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQL

Q7UHZ5 Peptide deformylase6.3e-3341.14Show/hide
Query:  PLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYA
        PL I+ +P   LR  ++ I   D  LK +  EM D+MY+ DG+GL+A QV + +++ V NP G+R EGE  V++NP + R  K      EGCLS P +Y 
Subjt:  PLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYA

Query:  DVERPESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPS
         V+RP++V++   D+ G      L G  ARV QHE DHL GI+FFDR+ +E +  +   L+  +  YE K G  S
Subjt:  DVERPESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPS

Q9FUZ2 Peptide deformylase 1B, chloroplastic/mitochondrial8.7e-9165.64Show/hide
Query:  RLALPAVFRRLTS-------FPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF
        R+ LP + RR T+         ST  F S  ++  P ++ V A+ KR  S K+D VAS+ D++FE PLKIVEYPD ILRAKNKRID FD+NLK LV  MF
Subjt:  RLALPAVFRRLTS-------FPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF

Query:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH
        DVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVKIDARDI G RF ++LS LPAR+FQH
Subjt:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH

Query:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK
        E+DHL+G+LFFDRMTD+V+D+IR +L+ALEKKYE+KTGLPSPER+E  + RK   GFGK
Subjt:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK

Q9FV54 Peptide deformylase 1B, chloroplastic2.2e-9466.54Show/hide
Query:  PTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKE--DDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF
        P +SR  +   +   L  + S    F  +S  +PP   VYAQA+R  S+K   D++A+  DL F  PLKIVEYPD ILRAKNKRID+FD NLKKLV EMF
Subjt:  PTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKE--DDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF

Query:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH
        D+MYKTDGIGLSAPQVG+NVQLMVFN  GERGEGEEIVLVNPRV RYS++ + + EGCLSFP I+ DV+RPESVK+DA+DINGTRF ++LS LPARVFQH
Subjt:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH

Query:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS
        EFDHLQG+LFFD+MTDEV+DTIR +L ALEKKYED+TGLP+PE I   + +K A GFGKS
Subjt:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS

Arabidopsis top hitse value%identityAlignment
AT1G15390.1 peptide deformylase 1A1.7e-2029.75Show/hide
Query:  LPHALPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFD---DNLKK
        LP +     R +  P       S P +    +      P S+      K G+     +    VDL      +IV   D +L  K + +D  +   + ++K
Subjt:  LPHALPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFD---DNLKK

Query:  LVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARD
        ++ +M  VM    G+GL+APQ+GV ++++V                   ER   + +V+VNP +   S K  LF EGCLS     A VER   V +   D
Subjt:  LVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARD

Query:  INGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTI
          G R  VN SG  AR+ QHE DHL G L+ D+M      T+
Subjt:  INGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTI

AT2G26990.1 proteasome family protein2.0e-1370.69Show/hide
Query:  MMDSYRVMHTYITSAVTHNYSEQCI-NFLDIVSGSASQSFCLLQEFYQTTLKALEEQR
        MM++Y  M TYI SAVT NYSE+CI N +D VSGSASQ+  LLQEFYQTTLKALEE +
Subjt:  MMDSYRVMHTYITSAVTHNYSEQCI-NFLDIVSGSASQSFCLLQEFYQTTLKALEEQR

AT5G14660.1 peptide deformylase 1B6.2e-9265.64Show/hide
Query:  RLALPAVFRRLTS-------FPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF
        R+ LP + RR T+         ST  F S  ++  P ++ V A+ KR  S K+D VAS+ D++FE PLKIVEYPD ILRAKNKRID FD+NLK LV  MF
Subjt:  RLALPAVFRRLTS-------FPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF

Query:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH
        DVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVKIDARDI G RF ++LS LPAR+FQH
Subjt:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH

Query:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK
        E+DHL+G+LFFDRMTD+V+D+IR +L+ALEKKYE+KTGLPSPER+E  + RK   GFGK
Subjt:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK

AT5G14660.2 peptide deformylase 1B6.2e-9265.64Show/hide
Query:  RLALPAVFRRLTS-------FPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF
        R+ LP + RR T+         ST  F S  ++  P ++ V A+ KR  S K+D VAS+ D++FE PLKIVEYPD ILRAKNKRID FD+NLK LV  MF
Subjt:  RLALPAVFRRLTS-------FPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMF

Query:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH
        DVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVKIDARDI G RF ++LS LPAR+FQH
Subjt:  DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDINGTRFMVNLSGLPARVFQH

Query:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK
        E+DHL+G+LFFDRMTD+V+D+IR +L+ALEKKYE+KTGLPSPER+E  + RK   GFGK
Subjt:  EFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATTCATATCGTGTGATGCATACATACATAACATCAGCAGTGACCCATAATTATAGTGAACAATGTATAAACTTCTTGGATATTGTGTCTGGATCAGCAAGTCA
GAGCTTCTGTCTGTTGCAAGAGTTTTATCAAACCACTTTGAAAGCCCTTGAAGAGCAAAGAATGAGGAACAACACAAGTCCTATCAAAGAGAAGACGGTACAAATGATCA
AAAGAAAGGAAGTCAACTTCTGGAGAGTGATAGAAAAACAATCATGTGATGCTTTCATTGGGAATTACATTCAAGATCCAGAACTCAAGGATTACTCAAACTTCTTATCA
AGCCTTACACAAGAATTCGAATTCTATTTATATATCGAAGGCGACAGCTTTAGGTCTGCTTCTCACCGGTCCACCGTCCGCGGCCGTTCTGGCCAATTTCTCGCCGCCAT
GTCTTACGCTACTCGATTACACCTTTCTCTCCCACACGCTCTTCCTACTGTATCCCGCCGGTTGGCGCTTCCCGCCGTTTTCCGGCGGCTGACCAGTTTTCCCTCAACCG
GAAAGTTCTTCTCCCATTCGAGTAAGTTCAGGCCTCCGTCGACTCTAGTTTACGCGCAGGCCAAGCGAGGTTTCTCTGCCAAAGAAGACGATGTAGCTTCGTCTGTTGAT
CTTGAATTTGAGGCACCGCTCAAAATTGTGGAATATCCGGACTCAATACTTAGAGCAAAGAATAAGCGTATCGATTCCTTTGATGATAATCTGAAGAAGTTGGTGTACGA
AATGTTTGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTAATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGTG
AGGAAATTGTTCTTGTGAACCCTAGAGTTTACAGATATTCCAAGAAAACTGTACTCTTTAATGAAGGTTGCTTATCGTTCCCGAGGATATATGCTGATGTAGAGAGACCA
GAATCAGTTAAGATCGATGCACGAGACATCAATGGTACAAGGTTCATGGTCAACTTATCAGGTCTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCATTTGCAGGGAAT
TTTGTTCTTTGATAGAATGACGGATGAAGTAGTTGATACCATTCGCCCTCAGCTGCAGGCCTTAGAAAAGAAGTACGAAGATAAAACTGGATTACCAAGTCCTGAAAGAA
TAGAGAACTTCAGAACAAGGAAGGTTGCTGCTGGTTTCGGAAAATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGATTCATATCGTGTGATGCATACATACATAACATCAGCAGTGACCCATAATTATAGTGAACAATGTATAAACTTCTTGGATATTGTGTCTGGATCAGCAAGTCA
GAGCTTCTGTCTGTTGCAAGAGTTTTATCAAACCACTTTGAAAGCCCTTGAAGAGCAAAGAATGAGGAACAACACAAGTCCTATCAAAGAGAAGACGGTACAAATGATCA
AAAGAAAGGAAGTCAACTTCTGGAGAGTGATAGAAAAACAATCATGTGATGCTTTCATTGGGAATTACATTCAAGATCCAGAACTCAAGGATTACTCAAACTTCTTATCA
AGCCTTACACAAGAATTCGAATTCTATTTATATATCGAAGGCGACAGCTTTAGGTCTGCTTCTCACCGGTCCACCGTCCGCGGCCGTTCTGGCCAATTTCTCGCCGCCAT
GTCTTACGCTACTCGATTACACCTTTCTCTCCCACACGCTCTTCCTACTGTATCCCGCCGGTTGGCGCTTCCCGCCGTTTTCCGGCGGCTGACCAGTTTTCCCTCAACCG
GAAAGTTCTTCTCCCATTCGAGTAAGTTCAGGCCTCCGTCGACTCTAGTTTACGCGCAGGCCAAGCGAGGTTTCTCTGCCAAAGAAGACGATGTAGCTTCGTCTGTTGAT
CTTGAATTTGAGGCACCGCTCAAAATTGTGGAATATCCGGACTCAATACTTAGAGCAAAGAATAAGCGTATCGATTCCTTTGATGATAATCTGAAGAAGTTGGTGTACGA
AATGTTTGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTAATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGTG
AGGAAATTGTTCTTGTGAACCCTAGAGTTTACAGATATTCCAAGAAAACTGTACTCTTTAATGAAGGTTGCTTATCGTTCCCGAGGATATATGCTGATGTAGAGAGACCA
GAATCAGTTAAGATCGATGCACGAGACATCAATGGTACAAGGTTCATGGTCAACTTATCAGGTCTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCATTTGCAGGGAAT
TTTGTTCTTTGATAGAATGACGGATGAAGTAGTTGATACCATTCGCCCTCAGCTGCAGGCCTTAGAAAAGAAGTACGAAGATAAAACTGGATTACCAAGTCCTGAAAGAA
TAGAGAACTTCAGAACAAGGAAGGTTGCTGCTGGTTTCGGAAAATCATGA
Protein sequenceShow/hide protein sequence
MMDSYRVMHTYITSAVTHNYSEQCINFLDIVSGSASQSFCLLQEFYQTTLKALEEQRMRNNTSPIKEKTVQMIKRKEVNFWRVIEKQSCDAFIGNYIQDPELKDYSNFLS
SLTQEFEFYLYIEGDSFRSASHRSTVRGRSGQFLAAMSYATRLHLSLPHALPTVSRRLALPAVFRRLTSFPSTGKFFSHSSKFRPPSTLVYAQAKRGFSAKEDDVASSVD
LEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPRIYADVERP
ESVKIDARDINGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVVDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS