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HG10019604 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019604
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionADP-ribosylation factor
Genome locationChr04:23683388..23683974
RNA-Seq ExpressionHG10019604
SyntenyHG10019604
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651256.1 hypothetical protein Csa_002144 [Cucumis sativus]2.2e-1657.73Show/hide
Query:  AATVAVGLMVGVAAVDWPM--------------------------------------DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        A   AVGLMVGVAAVDWPM                                      DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  AATVAVGLMVGVAAVDWPM--------------------------------------DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

OAP15945.1 hypothetical protein AXX17_AT1G53510 [Arabidopsis thaliana]2.1e-1497.62Show/hide
Query:  PMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        P+DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  PMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

OVA20730.1 Small GTPase superfamily [Macleaya cordata]2.7e-1484.31Show/hide
Query:  VGVAAVDWP-MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        +G+  + W  MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  VGVAAVDWP-MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

THF98357.1 hypothetical protein TEA_027383 [Camellia sinensis var. sinensis]4.6e-1476.79Show/hide
Query:  VAVGLMVGVAAVDWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        + + L+   A +D  +DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  VAVGLMVGVAAVDWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

XP_020524686.1 ADP-ribosylation factor 2-like, partial [Amborella trichopoda]2.1e-1495.35Show/hide
Query:  WPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        W  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  WPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

TrEMBL top hitse value%identityAlignment
A0A0E0N3Z4 Uncharacterized protein5.9e-1593.18Show/hide
Query:  DWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        +W  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

A0A151U4P9 ADP-ribosylation factor 22.9e-14100Show/hide
Query:  MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

A0A178WEN8 Uncharacterized protein1.0e-1497.62Show/hide
Query:  PMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        P+DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  PMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

A0A200RDE8 Small GTPase superfamily1.3e-1484.31Show/hide
Query:  VGVAAVDWP-MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        +G+  + W  MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  VGVAAVDWP-MDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

A0A4S4D7L4 Uncharacterized protein2.2e-1476.79Show/hide
Query:  VAVGLMVGVAAVDWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        + + L+   A +D  +DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  VAVGLMVGVAAVDWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

SwissProt top hitse value%identityAlignment
O48649 ADP-ribosylation factor 13.0e-16100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

P36397 ADP-ribosylation factor 13.0e-16100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

P51821 ADP-ribosylation factor 13.0e-16100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

P51824 ADP-ribosylation factor 13.0e-16100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

Q06396 ADP-ribosylation factor 13.0e-16100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

Arabidopsis top hitse value%identityAlignment
AT1G10630.1 ADP-ribosylation factor A1F2.1e-17100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

AT1G23490.1 ADP-ribosylation factor 12.1e-17100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

AT1G70490.1 Ras-related small GTP-binding family protein2.1e-17100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

AT1G70490.2 Ras-related small GTP-binding family protein2.1e-17100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW

AT1G70490.3 Ras-related small GTP-binding family protein2.1e-17100Show/hide
Query:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
        DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW
Subjt:  DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTGCAGCTACTGTAGCAGTGGGATTAATGGTTGGAGTAGCAGCAGTGGACTGGCCAATGGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCTAACAAGCA
AGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAGCTTGGTCTTCACTCTCTTCGTCAACGCCACTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCTGCAGCTACTGTAGCAGTGGGATTAATGGTTGGAGTAGCAGCAGTGGACTGGCCAATGGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCTAACAAGCA
AGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAGCTTGGTCTTCACTCTCTTCGTCAACGCCACTGGTAA
Protein sequenceShow/hide protein sequence
MVAAATVAVGLMVGVAAVDWPMDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW