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HG10019627 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019627
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipoxygenase
Genome locationChr04:23947965..23948237
RNA-Seq ExpressionHG10019627
SyntenyHG10019627
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0046394 - carboxylic acid biosynthetic process (biological process)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041369.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]3.4e-1853.33Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        MP+E+F  +P++FID P + +L+ FPS AQAST+A  M +LS HS DE+YIG +IEPAW ED TI   F++F+  L +LE  ID  NE S
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

TYK21643.1 lipoxygenase 2 [Cucumis melo var. makuwa]5.9e-1856.98Show/hide
Query:  SENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE
        +E++H LP++FID P NELL+VFPS  QA+ +   M LLS HS DE+YIG E+EPAW  +  I   F+RF+ANLK LE QID NN+
Subjt:  SENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE

XP_004142237.1 lipoxygenase 2, chloroplastic [Cucumis sativus]3.1e-1957.95Show/hide
Query:  SENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        +E++H LP++FID P NELL+VFPS  QAS +   M LLS HS DE+YIGDEIEPAW  + +I   F+RF+A+LK LE QID NN+ +
Subjt:  SENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

XP_016903673.1 PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]3.4e-1853.33Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        MP+E+F  +P++FID P + +L+ FPS AQAST+A  M +LS HS DE+YIG +IEPAW ED TI   F++F+  L +LE  ID  NE S
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

XP_038902235.1 lipoxygenase 2, chloroplastic-like [Benincasa hispida]1.8e-1957.78Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        M +E+FH LP++FID+P NELL+VFPS AQA+T+   M LLS HS DE+YIGDEIEPAW  + +I   F+RF A+L  LE QID +N+ +
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

TrEMBL top hitse value%identityAlignment
A0A1S4DXQ4 linoleate 13S-lipoxygenase 2-1, chloroplastic-like6.3e-1852.22Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        MP+E+F  +P++FI+ P + +L+ FPS AQAST+A  M +LS HS DE+YIG +IEPAW ED TI   F++F+  L +LE  ID  NE S
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

A0A1S4E618 linoleate 13S-lipoxygenase 2-1, chloroplastic-like1.7e-1853.33Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        MP+E+F  +P++FID P + +L+ FPS AQAST+A  M +LS HS DE+YIG +IEPAW ED TI   F++F+  L +LE  ID  NE S
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

A0A5A7TDJ5 Lipoxygenase6.3e-1852.22Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        MP+E+F  +P++FI+ P + +L+ FPS AQAST+A  M +LS HS DE+YIG +IEPAW ED TI   F++F+  L +LE  ID  NE S
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

A0A5A7TJ25 Lipoxygenase1.7e-1853.33Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        MP+E+F  +P++FID P + +L+ FPS AQAST+A  M +LS HS DE+YIG +IEPAW ED TI   F++F+  L +LE  ID  NE S
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

A0A5D3DDP9 Lipoxygenase2.8e-1856.98Show/hide
Query:  SENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE
        +E++H LP++FID P NELL+VFPS  QA+ +   M LLS HS DE+YIG E+EPAW  +  I   F+RF+ANLK LE QID NN+
Subjt:  SENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE

SwissProt top hitse value%identityAlignment
O24370 Linoleate 13S-lipoxygenase 2-1, chloroplastic2.2e-1246.15Show/hide
Query:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS
        F+++P   LL+ FPS  QA+ +  ++ +LSNHS DE+YIG++IEP W ED  I   F+ F   LK LE  ID  N  S
Subjt:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS

P38418 Lipoxygenase 2, chloroplastic7.2e-1141.56Show/hide
Query:  KDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN
        K+F + P   LLK +PS  QA+ + + + LLS HS DE+YIG++ E +W  +  I   F+RF+  L+ LE  ID  N
Subjt:  KDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN

P38419 Lipoxygenase 7, chloroplastic8.8e-0938.16Show/hide
Query:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE
        F+D P+  L + FPS  QA+ +  V+ +LS+HS DE+Y+G E    W  D  ++  +  F A LK +E  ID  N+
Subjt:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE

P93184 Lipoxygenase 2.1, chloroplastic2.5e-1136.78Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN
        MP+E      +DF++ P   LL  FPS  Q++ +  ++ LLS HS DE+Y+G   EPAW +D  I   F+ F+ + +++ +Q+D  N
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN

R9WS04 Lipoxygenase 2, chloroplastic4.7e-1038.67Show/hide
Query:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN
        F+++P + LL  FP+  QA+ +  ++ +LS+HS DE+YIG  +E +W  +  I++ F+ F   LK+L+D ID  N
Subjt:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 35.0e-0736.36Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPA-WYEDNTIRNPFQRFRANLKRLEDQIDHNN
        +P E+  P    FI  P        PS AQ S    V+  LS HS DE+YIG+  +P+ W  D  I   F  F A + R+E +I+  N
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPA-WYEDNTIRNPFQRFRANLKRLEDQIDHNN

AT1G55020.1 lipoxygenase 11.0e-0428.41Show/hide
Query:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE
        MP EN  P  ++    P+   LK   +  Q      ++ +LS HS DE Y+G      W  +      F++F   +K +E  ID  N+
Subjt:  MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein4.7e-0529.49Show/hide
Query:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGD--EIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE
        F+  P    L   P+  QA+ +  V   LS HS DE+Y+ +  E++  W++D  +   F +F   L ++E  I+  N+
Subjt:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGD--EIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNE

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein5.0e-0736.84Show/hide
Query:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPA-WYEDNTIRNPFQRFRANLKRLEDQIDHNN
        FI+ P        PS  Q +    V+  LS HS DE+YIG+  +P+ W  D  I + F  F A + R+E +ID  N
Subjt:  FIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPA-WYEDNTIRNPFQRFRANLKRLEDQIDHNN

AT3G45140.1 lipoxygenase 25.1e-1241.56Show/hide
Query:  KDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN
        K+F + P   LLK +PS  QA+ + + + LLS HS DE+YIG++ E +W  +  I   F+RF+  L+ LE  ID  N
Subjt:  KDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCAGAGAACTTTCATCCACTTCCAAAAGACTTTATAGACCAACCGAACAATGAGTTGCTTAAAGTTTTCCCTTCAGCTGCCCAGGCTTCTACAATGGCAATGGT
TATGGCATTGTTGTCGAATCATTCTCGAGATGAGCAGTACATTGGAGACGAGATAGAGCCAGCCTGGTATGAGGATAACACCATAAGAAACCCCTTTCAAAGGTTTAGAG
CAAACCTGAAGCGTCTAGAAGACCAAATTGACCATAATAATGAGAAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTCAGAGAACTTTCATCCACTTCCAAAAGACTTTATAGACCAACCGAACAATGAGTTGCTTAAAGTTTTCCCTTCAGCTGCCCAGGCTTCTACAATGGCAATGGT
TATGGCATTGTTGTCGAATCATTCTCGAGATGAGCAGTACATTGGAGACGAGATAGAGCCAGCCTGGTATGAGGATAACACCATAAGAAACCCCTTTCAAAGGTTTAGAG
CAAACCTGAAGCGTCTAGAAGACCAAATTGACCATAATAATGAGAAGAGTTGA
Protein sequenceShow/hide protein sequence
MPSENFHPLPKDFIDQPNNELLKVFPSAAQASTMAMVMALLSNHSRDEQYIGDEIEPAWYEDNTIRNPFQRFRANLKRLEDQIDHNNEKS