; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019645 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019645
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase H domain-containing protein
Genome locationChr04:24118013..24126501
RNA-Seq ExpressionHG10019645
SyntenyHG10019645
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150130.1 uncharacterized protein LOC111018384 [Momordica charantia]1.4e-10257.54Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKG V GFY+SLKE E Q GC IFDPNATIYKG+HLSKEAEQYLAS GLQSATYSISAANVT+DLFGKLLAC  EQ S+ RG+  EE  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
         A R  QV    EYGFVGANWVS DSPKQEIIWDHGFEA+PASSSC+ S SRGKMAE YS AKR  Q HETV+   + +R   +     +K         
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------
        QH T    F                  G   W  + LP      + +     C +  +TYFLEFDGASKGNPGLAGAGAV+RA DGS             
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------

Query:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
                                            VQGLWK+KN NM +LCKVAKELKDKF SFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
Subjt:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK

XP_022989146.1 uncharacterized protein LOC111486303 [Cucurbita maxima]4.0e-8651.01Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GL+SATYSISAANVT DLFGKLLACP EQ S+TRGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
        KAKRQ  V ENTE GFV A+ VS DSPKQEI  DHG EA+PASSS                                                       
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------
                                                                   YFLEFDGASKGNPGLAGAGAV+RANDG+             
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------

Query:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
                                            VQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANRAI+LRDG+VVEDCK
Subjt:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK

XP_038906127.1 uncharacterized protein LOC120092011 isoform X1 [Benincasa hispida]2.1e-10355.61Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKGDVFGFYRSLKEL+ QAG LIFDPNATIYKG+HLSKEAE YLAS GLQSATYSISAANVTKDLFGKLLACP EQ  A RGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEY------------------------------GFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHE
        K KRQEQV EN EY                              GFVGANWVS DSPKQE I DHGF A+PAS S QPSVSRGKMAE YSEA RSQQAHE
Subjt:  KAKRQEQVLENTEY------------------------------GFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHE

Query:  TVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKG
        TVQ                                                                                     TYFLEFDGASKG
Subjt:  TVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKG

Query:  NPGLAGAGAVIRANDGSA------------------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHI
        NPGLAGAGAV+RANDGS                                                 VQGLWKLKNQNMA LCKVAKELKDKF SFEISHI
Subjt:  NPGLAGAGAVIRANDGSA------------------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHI

Query:  PREQNSDADALANRAIHLRDGVVVEDCK
        PREQNSDAD LANRAIHLRDGVVVEDCK
Subjt:  PREQNSDADALANRAIHLRDGVVVEDCK

XP_038906128.1 uncharacterized protein LOC120092011 isoform X2 [Benincasa hispida]1.4e-9658.01Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKGDVFGFYRSLKEL+ QAG LIFDPNATIYKG+HLSKEAE YLAS GLQSATYSISAANVTKDLFGKLLACP EQ  A RGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEY------------------------------GFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHE
        K KRQEQV EN EY                              GFVGANWVS DSPKQE I DHGF A+PAS S QPSVSRGKMAE YSEA RSQQAHE
Subjt:  KAKRQEQVLENTEY------------------------------GFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHE

Query:  TVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDM-VKAERLFLCSSLGETYFLEFDGASK
        TVQ                  + L LF +L   TD      L+       +        ++ +K  L + ++ + V+ +   +C                
Subjt:  TVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDM-VKAERLFLCSSLGETYFLEFDGASK

Query:  GNPGLAGAGAVIRANDGSAVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
                           VQGLWKLKNQNMA LCKVAKELKDKF SFEISHIPREQNSDAD LANRAIHLRDGVVVEDCK
Subjt:  GNPGLAGAGAVIRANDGSAVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK

XP_038906129.1 uncharacterized protein LOC120092011 isoform X3 [Benincasa hispida]1.8e-9454.73Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKGDVFGFYRSLKEL+ QAG LIFDPNATIYKG+HLSKEAE YLAS GLQSATYSISAANVTKDLFGKLLACP E     R  ++ E P
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAK----RQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNL
        K +       + +  + +GFVGANWVS DSPKQE I DHGF A+PAS S QPSVSRGKMAE YSEA RSQQAHETVQ                       
Subjt:  KAK----RQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNL

Query:  FNLLQHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA--------
                                                                      TYFLEFDGASKGNPGLAGAGAV+RANDGS         
Subjt:  FNLLQHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA--------

Query:  ----------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVED
                                                VQGLWKLKNQNMA LCKVAKELKDKF SFEISHIPREQNSDAD LANRAIHLRDGVVVED
Subjt:  ----------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVED

Query:  CK
        CK
Subjt:  CK

TrEMBL top hitse value%identityAlignment
A0A1S3B7N6 uncharacterized protein LOC103487060 isoform X13.6e-6944.84Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY
        MEGDKDAYYVVQKGDVFGFYRS KEL TQ G   FDPNATIYKG+HLSKEAE+YL S GLQSATYSISAANVTKDLFGK+L C P EQ S TRGKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY

Query:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
        PKA+RQE+VL+NTEY                                                                                     
Subjt:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------
                                                                  TYFLEFDGASKGNPGLAGAGA++RANDGS             
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------

Query:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDC
                                            VQGLWKLKNQNMA+LCKVAKELKDKF SFEISH+PR +NSDADALANRAIHL+DGVVVEDC
Subjt:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDC

A0A1S3B873 uncharacterized protein LOC103487060 isoform X35.2e-7651Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY
        MEGDKDAYYVVQKGDVFGFYRS KEL TQ G   FDPNATIYKG+HLSKEAE+YL S GLQSATYSISAANVTKDLFGK+L C P EQ S TRGKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY

Query:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
        PKA+RQE+VL+NTEY                                                                                     
Subjt:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAVQGLWKLKNQNM
                                                                  TYFLEFDGASKGNPGLAGAGA++RANDGS VQGLWKLKNQNM
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAVQGLWKLKNQNM

Query:  AKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDC
        A+LCKVAKELKDKF SFEISH+PR +NSDADALANRAIHL+DGVVVEDC
Subjt:  AKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDC

A0A6J1D7M4 uncharacterized protein LOC1110183846.5e-10357.54Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKG V GFY+SLKE E Q GC IFDPNATIYKG+HLSKEAEQYLAS GLQSATYSISAANVT+DLFGKLLAC  EQ S+ RG+  EE  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
         A R  QV    EYGFVGANWVS DSPKQEIIWDHGFEA+PASSSC+ S SRGKMAE YS AKR  Q HETV+   + +R   +     +K         
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------
        QH T    F                  G   W  + LP      + +     C +  +TYFLEFDGASKGNPGLAGAGAV+RA DGS             
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------

Query:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
                                            VQGLWK+KN NM +LCKVAKELKDKF SFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
Subjt:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK

A0A6J1EJI9 uncharacterized protein LOC1114350642.1e-8550.75Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GL+SATYSISAANVT DLFGKLLACP EQ S+TRG+MAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
        KAKRQ  V ENTE GFVGA+ VS DS KQEI  DH  EA+PASSS                                                       
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------
                                                                   YFLEFDGASKGNPGLAGAGAV+RANDG+             
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------

Query:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
                                            VQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANRAIHLRDG+VVEDCK
Subjt:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK

A0A6J1JJ82 uncharacterized protein LOC1114863031.9e-8651.01Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GL+SATYSISAANVT DLFGKLLACP EQ S+TRGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL
        KAKRQ  V ENTE GFV A+ VS DSPKQEI  DHG EA+PASSS                                                       
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLL

Query:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------
                                                                   YFLEFDGASKGNPGLAGAGAV+RANDG+             
Subjt:  QHPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA------------

Query:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK
                                            VQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANRAI+LRDG+VVEDCK
Subjt:  ------------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein5.4e-2525.51Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        ++ +KDA++VV+KGDV G Y+ L + + Q G  +FD   ++YKG+ L K+ E+YL+S GL+   YS+ A+++  D+FG L  C  ++ +    K++E+  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQ
                                                               E  SE K      +                              Q
Subjt:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQ

Query:  HPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGS--------------
         P+ + S+D                              LE + K E     S   ET F+EFDGASKGNPGL+GA AV++  DGS              
Subjt:  HPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGS--------------

Query:  ----------------------------------AVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVV
                                           ++G WK+ ++ +AKL K AK L +K  SFEISH+ R  N+DAD  AN A+ L +G V
Subjt:  ----------------------------------AVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-3228.97Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        ME +KDA+Y+V+KGD+ G YRSL E + QAG  +  P  ++YKG+   K AE  L+S G+++A +S++A++V  D FGKL+ CP +              
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQ
                                                     QPS S+G+   K S +KR Q         ++      S P    K+E ++   + 
Subjt:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQ

Query:  HPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA-------------
            T      R P    DS                               C+       +EFDGASKGNPG AGAGAV+RA+D S              
Subjt:  HPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA-------------

Query:  -----------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDG
                                           VQG WK  +  MA+LCK AKEL + F +F+I HI RE+NS+AD  AN AI L DG
Subjt:  -----------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDG

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-3228.97Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        ME +KDA+Y+V+KGD+ G YRSL E + QAG  +  P  ++YKG+   K AE  L+S G+++A +S++A++V  D FGKL+ CP +              
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQ
                                                     QPS S+G+   K S +KR Q         ++      S P    K+E ++   + 
Subjt:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQ

Query:  HPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA-------------
            T      R P    DS                               C+       +EFDGASKGNPG AGAGAV+RA+D S              
Subjt:  HPTDTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSA-------------

Query:  -----------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDG
                                           VQG WK  +  MA+LCK AKEL + F +F+I HI RE+NS+AD  AN AI L DG
Subjt:  -----------------------------------VQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDG

AT5G51080.1 RNase H family protein1.5e-1923.65Show/hide
Query:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK
        +KDA++VV+KGD+ G Y+ L + + Q G  ++DP  ++YKG+ L K+ E+ L++ GL+   Y   A ++ +D+FG L  C             ++ P A 
Subjt:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK

Query:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPT
                                                    S+S  K+AE                                          L+   
Subjt:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPT

Query:  DTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAV---------------
        DTS                                                  ET  +EFDGASKGNPGL+GA AV++  DGS +               
Subjt:  DTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAV---------------

Query:  ---------------------------------QGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVV
                                         +G WK+ ++ ++KL K AK+L DK  SFEISH+ R  NSDAD  AN A  L +G V
Subjt:  ---------------------------------QGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVV

AT5G51080.2 RNase H family protein1.5e-1923.65Show/hide
Query:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK
        +KDA++VV+KGD+ G Y+ L + + Q G  ++DP  ++YKG+ L K+ E+ L++ GL+   Y   A ++ +D+FG L  C             ++ P A 
Subjt:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK

Query:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPT
                                                    S+S  K+AE                                          L+   
Subjt:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPT

Query:  DTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAV---------------
        DTS                                                  ET  +EFDGASKGNPGL+GA AV++  DGS +               
Subjt:  DTSSFDDLRFPFNGRDSRPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAV---------------

Query:  ---------------------------------QGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVV
                                         +G WK+ ++ ++KL K AK+L DK  SFEISH+ R  NSDAD  AN A  L +G V
Subjt:  ---------------------------------QGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGATAAAGATGCCTATTACGTCGTACAGAAAGGGGATGTTTTTGGATTTTACAGGAGTTTGAAGGAGTTGGAGACTCAAGCTGGATGTCTTATATTTGATCC
TAATGCAACGATCTACAAAGGGCACCACTTATCTAAAGAAGCAGAGCAGTACCTTGCATCACGCGGACTTCAGAGTGCCACCTACTCTATAAGTGCTGCCAATGTGACAA
AGGATCTCTTCGGAAAACTACTTGCTTGCCCTGACGAGCAACTGTCTGCTACTAGAGGAAAAATGGCTGAAGAATACCCCAAAGCTAAGAGACAAGAACAAGTCCTTGAG
AATACTGAATATGGGTTTGTAGGTGCCAACTGGGTCTCAGATTCTCCAAAGCAGGAAATTATTTGGGATCATGGCTTTGAAGCCTTACCTGCTTCTTCGAGCTGTCAACC
ATCTGTTTCTAGAGGAAAAATGGCTGAAAAGTACTCTGAGGCTAAGAGATCACAGCAAGCCCATGAGACTGTTCAAAGTCTCTGGGCAGTAACCCGCAACCCATCGTCGT
CACCAAACCTGAGTTCTAAAGTAGAACTCAATCTTTTCAACTTGTTACAACATCCTACTGACACATCGTCTTTTGATGATTTGAGGTTCCCATTCAATGGAAGAGACAGC
AGGCCGAGAATGCTATCTGGGAATCTGGTTTGGGTGAAATCATTTTTACCTATGTTTCTTGAGGATATGGTGAAAGCCGAAAGGCTCTTCTTGTGCAGCTCTTTGGGCGA
GACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGAAATCCTGGGCTAGCAGGTGCTGGAGCTGTTATACGTGCCAACGATGGATCTGCGGTTCAGGGTCTATGGAAGC
TCAAAAACCAAAATATGGCTAAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGGGTCATTTGAGATCAGCCATATCCCTAGGGAACAAAATTCCGATGCCGAT
GCTCTAGCGAACCGTGCTATACATCTCCGAGATGGAGTTGTAGTAGAAGACTGCAAGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGGATAAAGATGCCTATTACGTCGTACAGAAAGGGGATGTTTTTGGATTTTACAGGAGTTTGAAGGAGTTGGAGACTCAAGCTGGATGTCTTATATTTGATCC
TAATGCAACGATCTACAAAGGGCACCACTTATCTAAAGAAGCAGAGCAGTACCTTGCATCACGCGGACTTCAGAGTGCCACCTACTCTATAAGTGCTGCCAATGTGACAA
AGGATCTCTTCGGAAAACTACTTGCTTGCCCTGACGAGCAACTGTCTGCTACTAGAGGAAAAATGGCTGAAGAATACCCCAAAGCTAAGAGACAAGAACAAGTCCTTGAG
AATACTGAATATGGGTTTGTAGGTGCCAACTGGGTCTCAGATTCTCCAAAGCAGGAAATTATTTGGGATCATGGCTTTGAAGCCTTACCTGCTTCTTCGAGCTGTCAACC
ATCTGTTTCTAGAGGAAAAATGGCTGAAAAGTACTCTGAGGCTAAGAGATCACAGCAAGCCCATGAGACTGTTCAAAGTCTCTGGGCAGTAACCCGCAACCCATCGTCGT
CACCAAACCTGAGTTCTAAAGTAGAACTCAATCTTTTCAACTTGTTACAACATCCTACTGACACATCGTCTTTTGATGATTTGAGGTTCCCATTCAATGGAAGAGACAGC
AGGCCGAGAATGCTATCTGGGAATCTGGTTTGGGTGAAATCATTTTTACCTATGTTTCTTGAGGATATGGTGAAAGCCGAAAGGCTCTTCTTGTGCAGCTCTTTGGGCGA
GACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGAAATCCTGGGCTAGCAGGTGCTGGAGCTGTTATACGTGCCAACGATGGATCTGCGGTTCAGGGTCTATGGAAGC
TCAAAAACCAAAATATGGCTAAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGGGTCATTTGAGATCAGCCATATCCCTAGGGAACAAAATTCCGATGCCGAT
GCTCTAGCGAACCGTGCTATACATCTCCGAGATGGAGTTGTAGTAGAAGACTGCAAGCCATAA
Protein sequenceShow/hide protein sequence
MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAKRQEQVLE
NTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSLWAVTRNPSSSPNLSSKVELNLFNLLQHPTDTSSFDDLRFPFNGRDS
RPRMLSGNLVWVKSFLPMFLEDMVKAERLFLCSSLGETYFLEFDGASKGNPGLAGAGAVIRANDGSAVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDAD
ALANRAIHLRDGVVVEDCKP