; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019646 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019646
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHMA domain-containing protein
Genome locationChr04:24128731..24131013
RNA-Seq ExpressionHG10019646
SyntenyHG10019646
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581006.1 hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sororia]2.9e-7284.95Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASIS FPALHS+ R A   PSPI RPSF+LPSS++FT+ +AASFRHSAV+GRSR RGLKQ R VEEDAS+PE GVEGEA SPSPS+ PAVTVPVS SDI
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

XP_008443474.1 PREDICTED: uncharacterized protein LOC103487059 isoform X1 [Cucumis melo]5.0e-7287.63Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASISTFPALH    L FP  SP+ R SFSLPSSTNFTL +AASFRHS VQGRS PR LKQ RAVEEDASVPELGVE EA SPSPSD PAVTVPVSPSD+
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

XP_022983877.1 uncharacterized protein LOC111482359 [Cucurbita maxima]8.6e-7283.87Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASIS FPALHS+ R A   PSPI RPSF+LPSS++F ++AAA FRHSA +GRSRPRGLKQ R VEEDAS+PE G EGEAPSPSPS+ PAVTVPVS SDI
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASV LTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSFEDKEEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

XP_023526965.1 uncharacterized protein LOC111790332 [Cucurbita pepo subsp. pepo]2.0e-7384.95Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASIS FPALHSI R A   PSPI RP F+LPSS++FT+ +AASFRHSAV+GRSRPRGLKQ R VEEDAS+PE GVEGE PSPSPS+ PAVTVPVS SDI
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVF+
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

XP_038903053.1 uncharacterized protein LOC120089747 [Benincasa hispida]2.3e-8091.98Show/hide
Query:  MASI-STFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSD
        MASI STFPALHSI RLAFP PSPI RPSFSLPSSTNFTLAAA+SF HS V GRSR RGLKQP+AVEEDAS+PE GVEGE PSPSPSDSPAVTVPVSPSD
Subjt:  MASI-STFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSD

Query:  ILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        ILTMFFQAEGTLNESAIP+VTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEE FV
Subjt:  ILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

TrEMBL top hitse value%identityAlignment
A0A0A0LC88 HMA domain-containing protein1.3e-7086.02Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASISTFPALH  F  + PIPS     SFSLPS TNFTL +AASFRHS +QGRS PR LKQ RAVEEDASVPELGVE EA SPSPSD PAVTVPVSPSD+
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESAIPSVT ALEQTEGI+GLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A1S3B868 uncharacterized protein LOC103487059 isoform X12.4e-7287.63Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASISTFPALH    L FP  SP+ R SFSLPSSTNFTL +AASFRHS VQGRS PR LKQ RAVEEDASVPELGVE EA SPSPSD PAVTVPVSPSD+
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A5D3D1F9 Heavy-metal-associated domain-containing protein2.4e-7287.63Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASISTFPALH    L FP  SP+ R SFSLPSSTNFTL +AASFRHS VQGRS PR LKQ RAVEEDASVPELGVE EA SPSPSD PAVTVPVSPSD+
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A6J1F3X5 uncharacterized protein LOC1114419469.2e-7284.41Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASIS FPALHS+ R A   PSPI RPSF+LPSS++FT+ +AASF HSAV+GRSR RGLKQ R VEEDAS+PE GVEGEA SPSPS+ PAVTVPVS SDI
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A6J1J0J2 uncharacterized protein LOC1114823594.1e-7283.87Show/hide
Query:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI
        MASIS FPALHS+ R A   PSPI RPSF+LPSS++F ++AAA FRHSA +GRSRPRGLKQ R VEEDAS+PE G EGEAPSPSPS+ PAVTVPVS SDI
Subjt:  MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        LTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASV LTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSFEDKEEVFV
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14910.1 Heavy metal transport/detoxification superfamily protein7.6e-3450.26Show/hide
Query:  MASISTFPALHSIFRLAFP-IPSPILRPSFSLPSSTNFTLAAAASFRHSAVQG--RSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSP
        MASI+     HS  R   P + S  L P   L  + NF   A  + R+ +  G  +    GL++  ++ E       G EG A +        V+VPVSP
Subjt:  MASISTFPALHSIFRLAFP-IPSPILRPSFSLPSSTNFTLAAAASFRHSAVQG--RSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSP

Query:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        SD+LTMFFQA+GTLNE+AIP+VT AL+  +G++ LKVQV EG+A V L KQTT+Q+TGVAS+L+ETIQGAGFKLQTLNLSFED +EV V
Subjt:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCTCCACCTTCCCCGCCCTTCACTCCATTTTTCGCCTTGCATTTCCGATTCCATCCCCGATTCTCCGGCCTTCCTTCTCTCTTCCCTCCTCCACTAACTT
CACTCTCGCCGCCGCCGCCTCCTTCAGGCATTCGGCGGTTCAGGGCCGGAGCCGGCCACGCGGTCTGAAACAACCCAGGGCAGTTGAAGAGGATGCCTCTGTTCCCGAAC
TAGGAGTTGAAGGCGAAGCGCCGTCGCCTTCTCCGTCTGACTCGCCGGCAGTCACCGTGCCCGTCTCCCCCTCTGATATTCTCACCATGTTCTTCCAGGCGGAGGGGACG
CTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACAGAGGGTATCACCGGGTTGAAAGTTCAAGTCGTTGAGGGCATTGCATCAGTTGCGCTTACAAA
ACAAACAACAATACAATCTACAGGAGTGGCCTCGAGTTTGATCGAGACCATTCAAGGCGCTGGTTTTAAGTTACAAACATTGAATTTGAGTTTTGAGGATAAGGAAGAAG
TTTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATCTCCACCTTCCCCGCCCTTCACTCCATTTTTCGCCTTGCATTTCCGATTCCATCCCCGATTCTCCGGCCTTCCTTCTCTCTTCCCTCCTCCACTAACTT
CACTCTCGCCGCCGCCGCCTCCTTCAGGCATTCGGCGGTTCAGGGCCGGAGCCGGCCACGCGGTCTGAAACAACCCAGGGCAGTTGAAGAGGATGCCTCTGTTCCCGAAC
TAGGAGTTGAAGGCGAAGCGCCGTCGCCTTCTCCGTCTGACTCGCCGGCAGTCACCGTGCCCGTCTCCCCCTCTGATATTCTCACCATGTTCTTCCAGGCGGAGGGGACG
CTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACAGAGGGTATCACCGGGTTGAAAGTTCAAGTCGTTGAGGGCATTGCATCAGTTGCGCTTACAAA
ACAAACAACAATACAATCTACAGGAGTGGCCTCGAGTTTGATCGAGACCATTCAAGGCGCTGGTTTTAAGTTACAAACATTGAATTTGAGTTTTGAGGATAAGGAAGAAG
TTTTTGTTTAG
Protein sequenceShow/hide protein sequence
MASISTFPALHSIFRLAFPIPSPILRPSFSLPSSTNFTLAAAASFRHSAVQGRSRPRGLKQPRAVEEDASVPELGVEGEAPSPSPSDSPAVTVPVSPSDILTMFFQAEGT
LNESAIPSVTEALEQTEGITGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV