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HG10019692 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019692
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionpolyvinylalcohol dehydrogenase-like
Genome locationChr04:24460421..24460696
RNA-Seq ExpressionHG10019692
SyntenyHG10019692
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053748.1 polyvinylalcohol dehydrogenase-like [Cucumis melo var. makuwa]8.3e-3686.67Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GELL+VGIYGPAVVI VKRSTGKLVW  R+DYK RSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

KGN59583.1 hypothetical protein Csa_002525 [Cucumis sativus]4.4e-3788.89Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GEL++VGIYGPAVVI VKRSTGKLVW TRLDYKNRSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

XP_008443424.1 PREDICTED: polyvinylalcohol dehydrogenase-like [Cucumis melo]8.3e-3686.67Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GELL+VGIYGPAVVI VKRSTGKLVW  R+DYK RSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

XP_022159165.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025591 [Momordica charantia]2.0e-3483.33Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   + A+NG L+WKKNLQKLTGF+NTGFILNVNSTVSRSTPTV GELLLVGIYGPA V+AVKRSTG LVWSTRLDY NRSFI+MSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

XP_031738007.1 uncharacterized protein LOC101211277 [Cucumis sativus]4.4e-3788.89Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GEL++VGIYGPAVVI VKRSTGKLVW TRLDYKNRSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

TrEMBL top hitse value%identityAlignment
A0A0A0LCT6 Uncharacterized protein2.1e-3788.89Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GEL++VGIYGPAVVI VKRSTGKLVW TRLDYKNRSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

A0A1S3B7I7 polyvinylalcohol dehydrogenase-like4.0e-3686.67Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GELL+VGIYGPAVVI VKRSTGKLVW  R+DYK RSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

A0A2N9HSE8 Uncharacterized protein8.3e-3482.22Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        G+   ++AS+G+LIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTV G LL++GIYGP VVIAVKRSTGKLVWSTRLD   RSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

A0A5A7UF76 Polyvinylalcohol dehydrogenase-like4.0e-3686.67Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   +RASNGAL+WKKNLQKLTGFNNTGFILNVNSTVSRSTPTV GELL+VGIYGPAVVI VKRSTGKLVW  R+DYK RSFITMSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

A0A6J1DXW9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110255919.9e-3583.33Show/hide
Query:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY
        GF   + A+NG L+WKKNLQKLTGF+NTGFILNVNSTVSRSTPTV GELLLVGIYGPA V+AVKRSTG LVWSTRLDY NRSFI+MSGTY
Subjt:  GFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTGTACGCCGATTAGAGCTTCCAATGGAGCTCTTATTTGGAAGAAGAATCTGCAAAAACTGACGGGGTTCAACAATACCGGATTCATTCTAAATGTTAACTC
CACGGTGTCCAGATCGACTCCCACGGTGGTCGGAGAATTGCTCCTCGTCGGAATATATGGACCTGCCGTCGTCATCGCTGTTAAAAGATCAACGGGGAAGCTTGTGTGGT
CAACGAGGCTGGATTATAAAAATAGAAGTTTCATCACCATGTCTGGCACATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTGTACGCCGATTAGAGCTTCCAATGGAGCTCTTATTTGGAAGAAGAATCTGCAAAAACTGACGGGGTTCAACAATACCGGATTCATTCTAAATGTTAACTC
CACGGTGTCCAGATCGACTCCCACGGTGGTCGGAGAATTGCTCCTCGTCGGAATATATGGACCTGCCGTCGTCATCGCTGTTAAAAGATCAACGGGGAAGCTTGTGTGGT
CAACGAGGCTGGATTATAAAAATAGAAGTTTCATCACCATGTCTGGCACATACTAA
Protein sequenceShow/hide protein sequence
MGFCTPIRASNGALIWKKNLQKLTGFNNTGFILNVNSTVSRSTPTVVGELLLVGIYGPAVVIAVKRSTGKLVWSTRLDYKNRSFITMSGTY