; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019758 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019758
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCRM domain-containing protein
Genome locationChr04:25189172..25193013
RNA-Seq ExpressionHG10019758
SyntenyHG10019758
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580934.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-16576.48Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQP  RP+LGVPD+ FS+I NFPL NIS+PL GFRNLS+GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR REK+KRKAANKKD
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+FSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+ILD+P DN+ NS KHQ ++++DSHSAALCLASDV N+R P+FSD++SL+IG+ FADSCFSTSE++FESD LDD + GRIE SFSQTG E+SSTT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKH
        MN  SA QN+ EFHNQEL  H
Subjt:  MNAGSAFQNECEFHNQELRKH

KAG7017679.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-16576.48Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQP  RP+LGVPD+ FS+I NFPL NIS+PL GFRNLS+GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR REK+KRKAANKKD
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+FSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+ILD+P DN+ NS KHQ ++++DSHSAALCLASDV N+R P+FSD++SL+IG+ FADSCFSTSE++FESD LDD + GRIE SFSQTG E+SSTT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKH
        MN  SA QN+ EFHNQEL  H
Subjt:  MNAGSAFQNECEFHNQELRKH

XP_008443348.1 PREDICTED: CRM-domain containing factor CFM3, chloroplastic/mitochondrial [Cucumis melo]3.0e-16576.54Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQ S RPIL +PDT+FSQI NFP  NISKPL GFRNLSHGSVNLVV+QGKPKFETH VDPPKKEKWKTKKKLKMQRMR K+KRKAANK+D
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+F NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGPIVKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+IL++P DN+ NS KHQ   ++DSHSAALCL SDV NQR PDFSD++SLDIGD F D+CFSTSESDFESDKLD+SDDGRIEVS SQT EE+ STT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKHS
        MN  SAFQN+CEFH QEL  HS
Subjt:  MNAGSAFQNECEFHNQELRKHS

XP_022935659.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata]4.6e-16676.96Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQP  RP+LGVPD+ FS+I NFPL NISKPL GFRNLS+GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR REK+KRKAANKKD
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+FSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+ILD+P DN+ NS KHQ ++++DSHSAALCLASDV N+R P+FSD++SL+IG+ FADSCFSTSES+FESD LDD + GRIE SFSQTG E+SSTT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKH
        MN  SA QN+ EFHNQEL  H
Subjt:  MNAGSAFQNECEFHNQELRKH

XP_038903000.1 CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida]7.4e-17280.38Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQPS RPILGV DTIFSQINNF LPNISKPL GFRNLSHGSVNLV+SQGKPKFETHEVDPPKK+KWKTK+KLKMQR REK+KRKA NKKD
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+ILDIP +N   SHKHQ NKLDDSHSAALCLAS+VTNQR PDF D++SL+ GDGF DSCFSTSESDFESDKLDDSDDGRIE+SFSQTG E+SS+T
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQEL
        M+  SAFQN+ E H QEL
Subjt:  MNAGSAFQNECEFHNQEL

TrEMBL top hitse value%identityAlignment
A0A0A0LF61 CRM domain-containing protein2.2e-15071.33Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        A LLFRSSSLNQ S RPIL +PDT+FSQI  FP  NISKPL GFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMR K+KRKAANK+D
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLR                      ARIKEALLIERL+RYEVP+VQGP+VKPH+LT EERFY+KKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+IL++P DN+ NS K+Q   ++DSHSAALCLASDV NQR PDFSD++SLDIGDGFAD+CFSTSESDFESDKLD+S +GR+EVS SQT EE+SSTT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKHS
        MN  SAF N+CEFH QEL  HS
Subjt:  MNAGSAFQNECEFHNQELRKHS

A0A1S3B7C2 CRM-domain containing factor CFM3, chloroplastic/mitochondrial1.5e-16576.54Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQ S RPIL +PDT+FSQI NFP  NISKPL GFRNLSHGSVNLVV+QGKPKFETH VDPPKKEKWKTKKKLKMQRMR K+KRKAANK+D
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+F NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGPIVKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+IL++P DN+ NS KHQ   ++DSHSAALCL SDV NQR PDFSD++SLDIGD F D+CFSTSESDFESDKLD+SDDGRIEVS SQT EE+ STT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKHS
        MN  SAFQN+CEFH QEL  HS
Subjt:  MNAGSAFQNECEFHNQELRKHS

A0A5A7UFD6 CRM-domain containing factor CFM31.5e-16576.54Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQ S RPIL +PDT+FSQI NFP  NISKPL GFRNLSHGSVNLVV+QGKPKFETH VDPPKKEKWKTKKKLKMQRMR K+KRKAANK+D
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+F NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGPIVKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+IL++P DN+ NS KHQ   ++DSHSAALCL SDV NQR PDFSD++SLDIGD F D+CFSTSESDFESDKLD+SDDGRIEVS SQT EE+ STT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKHS
        MN  SAFQN+CEFH QEL  HS
Subjt:  MNAGSAFQNECEFHNQELRKHS

A0A6J1F621 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.2e-16676.96Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRSSSLNQP  RP+LGVPD+ FS+I NFPL NISKPL GFRNLS+GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR REK+KRKAANKKD
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+FSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT
        DRNPL+ILD+P DN+ NS KHQ ++++DSHSAALCLASDV N+R P+FSD++SL+IG+ FADSCFSTSES+FESD LDD + GRIE SFSQTG E+SSTT
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTT

Query:  MNAGSAFQNECEFHNQELRKH
        MN  SA QN+ EFHNQEL  H
Subjt:  MNAGSAFQNECEFHNQELRKH

A0A6J1J3F1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.8e-14475.75Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD
        ASLLFRS SL QP  RP+LGVPD+ FS I N PL NISKP  GFRNLS+GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQRMREK+KRKAANKKD
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKD

Query:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------
        PRQLRVKGKKKQ+FSNAEERIKHKLEKARIKEALLIERLKRYEVP+VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FG               
Subjt:  PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG---------------

Query:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
                                    +QIIGDDTIIFYRGKEYVQP VMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Subjt:  ----------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN

Query:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFST
        DRNPL+ILD+P DN+ NS KHQ ++++DSHSA+LCLASDV N+R P+FSD++SL+IG+  ADSCFST
Subjt:  DRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFST

SwissProt top hitse value%identityAlignment
Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.4e-1633.2Show/hide
Query:  NISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKK-KRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEAL
        ++++P+W    L   S +       P  ET + D  K E   ++      +++ KK K K A  +  +  R K KK+     +EE+I +KL KAR KE  
Subjt:  NISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKK-KRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEAL

Query:  LIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGVQIIG-------------------------------------------D
        L+E +K+ E          P  LT EE FY  KMG K  NYVP+GRRGI+   I+                                             
Subjt:  LIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGVQIIG-------------------------------------------D

Query:  DTIIFYRGKEYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELEL
        +TII YRGK YVQP  E+MSP  TL +K+AL+KSK   +L +VR++I   E+EL+L
Subjt:  DTIIFYRGKEYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELEL

Q9LT57 CRM-domain containing factor CFM9, mitochondrial2.0e-1531.58Show/hide
Query:  TKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVP
        T +   M+   E + RK +  K  R++R   K K++    EER+ + L++A+ K ALL+++LK+Y++P +  P+  P   T+E+    KK+G K  NYVP
Subjt:  TKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVP

Query:  IGRRGIFG---------------VQIIGDD----------------------------TIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRR
        +G RG+FG               VQ+  D+                            TII +RG+ Y QP+ + P++TL+K++AL K+++EQ+LES + 
Subjt:  IGRRGIFG---------------VQIIGDD----------------------------TIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRR

Query:  FIAIAEKEL
         I   E++L
Subjt:  FIAIAEKEL

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.1e-8854.45Show/hide
Query:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSH--GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANK
        AS   RSS     S R +L +    +     F LP  ++P+   RN SH  G+VNLV+S+GKPKFET E+DPPKK KW TKK+LK++R +E+++R AAN+
Subjt:  ASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSH--GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANK

Query:  KDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG-------------
        KDPR+L VKGKKK +F NAEERIK+KLEKA+IKEALLIERLKRYEV +VQGP V+PH +T EERFY+KKMGQKRSNYVPIGRRG+FG             
Subjt:  KDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG-------------

Query:  ------------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGD
                                      V IIGDDTIIFYRGK YVQP+VMSPIDTLSKKRA EKSKYEQSLESVR FIAIAEKELELYYRHVALY D
Subjt:  ------------------------------VQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGD

Query:  PNDRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSE
        PN+RNPL+ILD   D+ + S +H  N+            SD  +  + +  D +  ++ +G + S  +  E
Subjt:  PNDRNPLAILDIPYDNMNNSHKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSE

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.7e-1733.2Show/hide
Query:  NISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKK-KRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEAL
        ++++P+W    L   S +       P  ET + D  K E   ++      +++ KK K K A  +  +  R K KK+     +EE+I +KL KAR KE  
Subjt:  NISKPLWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKK-KRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEAL

Query:  LIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGVQIIG-------------------------------------------D
        L+E +K+ E          P  LT EE FY  KMG K  NYVP+GRRGI+   I+                                             
Subjt:  LIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGVQIIG-------------------------------------------D

Query:  DTIIFYRGKEYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELEL
        +TII YRGK YVQP  E+MSP  TL +K+AL+KSK   +L +VR++I   E+EL+L
Subjt:  DTIIFYRGKEYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELEL

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein4.2e-1635.06Show/hide
Query:  PKFETHEVDPPKKEKWKTKKKLKMQRMREKK-KRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTA
        P  ET + D  K E   ++      +++ KK K K A  +  +  R K KK+     +EE+I +KL KAR KE  L+E +K+ E          P  LT 
Subjt:  PKFETHEVDPPKKEKWKTKKKLKMQRMREKK-KRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTA

Query:  EERFYMKKMGQKRSNYVPIGRRGIFGVQIIG-------------------------------------------DDTIIFYRGKEYVQP--EVMSPIDTL
        EE FY  KMG K  NYVP+GRRGI+   I+                                             +TII YRGK YVQP  E+MSP  TL
Subjt:  EERFYMKKMGQKRSNYVPIGRRGIFGVQIIG-------------------------------------------DDTIIFYRGKEYVQP--EVMSPIDTL

Query:  SKKRALEKSKYEQSLESVRRFIAIAEKELEL
         +K+AL+KSK   +L +VR++I   E+EL+L
Subjt:  SKKRALEKSKYEQSLESVRRFIAIAEKELEL

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.4e-1631.58Show/hide
Query:  TKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVP
        T +   M+   E + RK +  K  R++R   K K++    EER+ + L++A+ K ALL+++LK+Y++P +  P+  P   T+E+    KK+G K  NYVP
Subjt:  TKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVP

Query:  IGRRGIFG---------------VQIIGDD----------------------------TIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRR
        +G RG+FG               VQ+  D+                            TII +RG+ Y QP+ + P++TL+K++AL K+++EQ+LES + 
Subjt:  IGRRGIFG---------------VQIIGDD----------------------------TIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRR

Query:  FIAIAEKEL
         I   E++L
Subjt:  FIAIAEKEL

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein7.2e-3236.26Show/hide
Query:  LWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLK
        L+  R LS+ ++ L       +F  + V         T+K+ K +R +  +K K     + R  R+K KKK    N E RI++KLEKA+ KE  LIE+L+
Subjt:  LWGFRNLSHGSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLK

Query:  RYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG--------------------------------------------VQIIGDDTIIF
        +Y+VP+       P +LT EE+ Y+K+ G+KR N+V +GRRG+FG                                            + +  ++TI+ 
Subjt:  RYEVPRVQGPIVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG--------------------------------------------VQIIGDDTIIF

Query:  YRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND
        YRGK YV+PEVMSP+DTLSK +ALEK +YEQSLE    FI   EKELE Y+++VA +    D
Subjt:  YRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAACCGACTGCTGAAATGCTGATTGGTTTGGGGTTCTTCTCTGCAAGTCTCAGCGCCGCCGCCGATTGTCAGCACTGCAATTCTCAGCGTCGATTCTCT
CTCCCTGCACTGCCAGCTTCTCTGCTTTTCAGATCTTCATCACTGAACCAACCGTCTGTCAGACCTATTCTTGGGGTTCCTGACACTATTTTCTCTCAAATCAAC
AACTTTCCTCTACCGAACATCTCAAAACCTCTGTGGGGATTTAGAAATCTAAGCCATGGTTCTGTGAATCTTGTTGTATCCCAAGGGAAACCGAAGTTTGAAACA
CATGAAGTCGATCCTCCAAAAAAAGAGAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGAAGAAAAGAAAAGCGGCAAATAAGAAAGAC
CCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAACAGAGATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTGGAAAAAGCCAGGATTAAGGAGGCATTGCTG
ATTGAGAGATTAAAGCGGTATGAAGTTCCTAGAGTTCAGGGTCCTATAGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAA
AAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAATTTTTGGAGTACAGATAATTGGTGATGATACTATTATCTTCTATCGAGGAAAGGAATATGTGCAACCA
GAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCGCTAGAGAAGTCCAAGTACGAGCAATCCCTCGAGTCTGTACGCCGCTTCATTGCCATTGCTGAA
AAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCAAATGATAGGAATCCGTTGGCCATTTTAGACATTCCATATGACAACATGAATAACTCA
CACAAACATCAAGGTAATAAATTGGATGATTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTACGAACCAGAGAAAACCCGATTTCTCGGACAACAAGTCA
TTAGATATTGGAGATGGATTTGCAGATTCCTGCTTTTCTACTAGTGAATCAGATTTTGAAAGTGACAAATTAGATGACTCTGATGATGGGAGGATAGAAGTTAGT
TTTTCCCAGACAGGAGAGGAGTTGTCCTCAACCACAATGAACGCTGGTTCAGCTTTCCAGAATGAATGTGAATTTCATAACCAAGAACTACGGAAACACTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAACCGACTGCTGAAATGCTGATTGGTTTGGGGTTCTTCTCTGCAAGTCTCAGCGCCGCCGCCGATTGTCAGCACTGCAATTCTCAGCGTCGATTCTCT
CTCCCTGCACTGCCAGCTTCTCTGCTTTTCAGATCTTCATCACTGAACCAACCGTCTGTCAGACCTATTCTTGGGGTTCCTGACACTATTTTCTCTCAAATCAAC
AACTTTCCTCTACCGAACATCTCAAAACCTCTGTGGGGATTTAGAAATCTAAGCCATGGTTCTGTGAATCTTGTTGTATCCCAAGGGAAACCGAAGTTTGAAACA
CATGAAGTCGATCCTCCAAAAAAAGAGAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGAAGAAAAGAAAAGCGGCAAATAAGAAAGAC
CCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAACAGAGATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTGGAAAAAGCCAGGATTAAGGAGGCATTGCTG
ATTGAGAGATTAAAGCGGTATGAAGTTCCTAGAGTTCAGGGTCCTATAGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAA
AAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAATTTTTGGAGTACAGATAATTGGTGATGATACTATTATCTTCTATCGAGGAAAGGAATATGTGCAACCA
GAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCGCTAGAGAAGTCCAAGTACGAGCAATCCCTCGAGTCTGTACGCCGCTTCATTGCCATTGCTGAA
AAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCAAATGATAGGAATCCGTTGGCCATTTTAGACATTCCATATGACAACATGAATAACTCA
CACAAACATCAAGGTAATAAATTGGATGATTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTACGAACCAGAGAAAACCCGATTTCTCGGACAACAAGTCA
TTAGATATTGGAGATGGATTTGCAGATTCCTGCTTTTCTACTAGTGAATCAGATTTTGAAAGTGACAAATTAGATGACTCTGATGATGGGAGGATAGAAGTTAGT
TTTTCCCAGACAGGAGAGGAGTTGTCCTCAACCACAATGAACGCTGGTTCAGCTTTCCAGAATGAATGTGAATTTCATAACCAAGAACTACGGAAACACTCGTAA
Protein sequenceShow/hide protein sequence
MFEPTAEMLIGLGFFSASLSAAADCQHCNSQRRFSLPALPASLLFRSSSLNQPSVRPILGVPDTIFSQINNFPLPNISKPLWGFRNLSHGSVNLVVSQGKPKFET
HEVDPPKKEKWKTKKKLKMQRMREKKKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMGQ
KRSNYVPIGRRGIFGVQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLAILDIPYDNMNNS
HKHQGNKLDDSHSAALCLASDVTNQRKPDFSDNKSLDIGDGFADSCFSTSESDFESDKLDDSDDGRIEVSFSQTGEELSSTTMNAGSAFQNECEFHNQELRKHS