CuGenDBv2

Gene ID	HG10019774
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L23
Genome location	Chr04:25357767..25358147
RNA-Seq Expression	HG10019774
Synteny	HG10019774
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domains	IPR000218 - Ribosomal protein L14P IPR036853 - Ribosomal protein L14 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF2294890.1 hypothetical protein GH714_026853 [Hevea brasiliensis]

4.9e-47

76.98

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K V+P VIV+QRKPW+RKDGV+ YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

KAG7011290.1 60S ribosomal protein L23 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-47

78.57

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

KDO43340.1 hypothetical protein CISIN_1g032476mg [Citrus sinensis]

2.2e-47

77.78

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K V+P VIV+QRKPW+RKDGVF YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

XP_024188999.1 60S ribosomal protein L23 [Rosa chinensis]

8.4e-47

72.86

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA MV CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

XP_028085853.1 60S ribosomal protein L23 isoform X2 [Camellia sinensis]

3.8e-47

77.78

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K V+P VIV+QRKPW+RKDGVF YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

TrEMBL top hits

e value

%identity

Alignment

A0A067DP37 Uncharacterized protein

1.1e-47

77.78

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K V+P VIV+QRKPW+RKDGVF YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

A0A2P6R5J4 Putative ribosomal protein L14P

4.1e-47

72.86

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA MV CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

A0A6A6L0M2 Uncharacterized protein

2.4e-47

76.98

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K V+P VIV+QRKPW+RKDGV+ YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

A0A6J1HWG1 60S ribosomal protein L23

2.0e-46

72.14

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

A0A6J5TFT6 Uncharacterized protein

6.3e-48

78.57

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+ 
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  NAIASPIGKECADLWPRIASAANAIV
        +AI  PIGKECADLWPRIASAANAIV
Subjt:  NAIASPIGKECADLWPRIASAANAIV

SwissProt top hits

e value

%identity

Alignment

P49690 60S ribosomal protein L23

9.4e-49

71.43

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  G++ NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

P62829 60S ribosomal protein L23

1.4e-39

60.43

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS+  KFR+SLGLPV  ++ CA NTGAKNLYII+V+ IK RLNRLP A VG MVM TVKKGKP+++K V P V+++QRK ++RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAI
        N              AI  P+ KECADLWPRIAS A +I
Subjt:  N--------------AIASPIGKECADLWPRIASAANAI

Q07760 60S ribosomal protein L23

1.6e-48

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS  NKFRMSLGLPVA  + CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K V+P V+V+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

Q3T057 60S ribosomal protein L23

1.4e-39

60.43

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS+  KFR+SLGLPV  ++ CA NTGAKNLYII+V+ IK RLNRLP A VG MVM TVKKGKP+++K V P V+++QRK ++RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAI
        N              AI  P+ KECADLWPRIAS A +I
Subjt:  N--------------AIASPIGKECADLWPRIASAANAI

Q9XEK8 60S ribosomal protein L23

2.8e-45

67.14

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  GS+ NKFRMSLGLPV  +V CA NTGAKNLY+I+   ++ RLNRLP A VG MVM TVKKGKPD++K V+P VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

Arabidopsis top hits

e value

%identity

Alignment

AT1G04480.1 Ribosomal protein L14p/L23e family protein

6.7e-50

71.43

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  G++ NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

AT2G33370.1 Ribosomal protein L14p/L23e family protein

6.7e-50

71.43

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  G++ NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

AT3G04400.1 Ribosomal protein L14p/L23e family protein

6.7e-50

71.43

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Query:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD
        MSKRG  G++ NKFRMSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+D
Subjt:  MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKD

Query:  N--------------AIASPIGKECADLWPRIASAANAIV
        N              AI  PIGKECADLWPRIASAANAIV
Subjt:  N--------------AIASPIGKECADLWPRIASAANAIV

AT3G04400.2 Ribosomal protein L14p/L23e family protein

5.5e-44

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Query:  MSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKDN--------------
        MSLGLPVA  V CA NTGAKNLYII+V+ IK RLNRLP ACVG MVM TVKKGKPD++K VLP VIV+QRKPW+RKDGVF YF+DN              
Subjt:  MSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKDN--------------

Query:  AIASPIGKECADLWPRIASAANAIV
        AI  PIGKECADLWPRIASAANAIV
Subjt:  AIASPIGKECADLWPRIASAANAIV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCAAAGCGAGGGCACGAAGGATCTACATGTAACAAGTTTAGGATGTCACTAGGTCTACCAGTGGCGGTGATGGTATATTGTGCCCAGAACACTGGAGCCAAGAACTT
GTACATCATCACAGTGCAGGATATCAAGGAGCGTTTGAACAGATTGCCATTGGCCTGTGTTGGATACATGGTAATGAAAACTGTAAAAAAGGGAAAGCCCGATATGAAGA
AAAATGTCCTCCCTAATGTCATTGTCAAGCAACGCAAGCCATGGCAGCGAAAGGATGGGGTTTTCACGTACTTTAAAGATAATGCAATTGCTAGTCCTATTGGAAAGGAG
TGTGCAGATTTGTGGCCTAGGATAGCAAGTGCAGCCAATGCTATTGTTTAG

mRNA sequence

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Protein sequence

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MSKRGHEGSTCNKFRMSLGLPVAVMVYCAQNTGAKNLYIITVQDIKERLNRLPLACVGYMVMKTVKKGKPDMKKNVLPNVIVKQRKPWQRKDGVFTYFKDNAIASPIGKE
CADLWPRIASAANAIV

HG10019774 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome