CuGenDBv2

Gene ID	HG10019782
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NUC173 domain-containing protein
Genome location	Chr04:25424844..25437309
RNA-Seq Expression	HG10019782
Synteny	HG10019782
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0053835.1 RRP12-like protein [Cucumis melo var. makuwa]

9.0e-201

82.54

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFS-------------FQEHAWFASSRFPDL
        +S LERFQFLNTK EFEEP ANADE AQNAEG S TREIDLQRCV+LELASAI+RGADEDLIDLIYKF                  +EHAWFASSRFP+L
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFS-------------FQEHAWFASSRFPDL

Query:  VDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGA
        VDMLIDLQ PVDTSSQRSRFACFHILLV+SLKVSS EESNKAFLMLNEII+ LKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAH+KFVAMILGYLSGA
Subjt:  VDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGA

Query:  SPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRK
        SPHVKSGAISALSVLVY+DADICLSIPDLVPSLLSLLRGKAIEVIKA LGFVKVLVSSLQAKHLQSI SDIL AALPWSSVS+HHFRSKVTVILEILIRK
Subjt:  SPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRK

Query:  CGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSKTD
        CGYAAIE  TP+ YKGFIKPLGEKRHNKTS KD GDANTDVAD STN               ARDKQQDGLDSLPKKSESG+HRKRKWEKPSGFIRSKTD
Subjt:  CGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSKTD

Query:  GAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG
            EDGGR KMRKRAATSNSK+     G GDG RT FSRRG PRKDGKRGI+HG++HQKERFG
Subjt:  GAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG

XP_004136785.1 RRP12-like protein [Cucumis sativus]

1.7e-199

81.4

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        MS LERFQFLNTK EFEE  ANADE AQNAEG S TRE    RCVMLELA+AI+RGADEDLIDLIYKFVKFSFQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
        SRFP+LVDMLIDLQSPVDTSSQRSRF CFHILLVHSLKVSS EESNKAFLMLNEII+ LKSAEE SRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMI+
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL

Query:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL
        GYLSGASPHVKSGAISA+SVL+YEDADICLSIPDLVPS+LSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDIL AALPWSSVS+HHFRSKVTVIL
Subjt:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL

Query:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF
        EILIRKCGYAAIE  TPE YKGFIKP GEKR NKTSSKD GDANTDVAD STNG               RDKQQDGLDSLPKK+ESG+HRKRKWEKPSGF
Subjt:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF

Query:  IRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR
        IRSKTD A  EDG R KMRKRAATS+SK      G GDGRRT FSRRG PRK+GK GI+HG++HQKERFGVRR
Subjt:  IRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR

XP_008443313.1 PREDICTED: RRP12-like protein [Cucumis melo]

2.7e-205

82.88

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        +S LERFQFLNTK EFEEP ANADE AQNAEG S TREIDLQRCV+LELASAI+RGADEDLIDLIYKFVKFSFQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
        SRFP+LVDMLIDLQ PVDTSSQRSRFACFHILLV+SLKVSS EESNKAFLMLNEII+ LKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAH+KFVAMIL
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL

Query:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL
        GYLSGASPHVKSGAISALSVLVY+DADICLSIPDLVPSLLSLLRGKAIEVIKA LGFVKVLVSSLQAKHLQSI SDIL AALPWSSVS+HHFRSKVTVIL
Subjt:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL

Query:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF
        EILIRKCGYAAIE  TP+ YKGFIKPLGEKRHNKTS KD GDANTDVAD STN               ARDKQQDGLDSLPKKSESG+HRKRKWEKPSGF
Subjt:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF

Query:  IRSKTDGAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR
        IRSKTD    EDGGR KMRKRAATSNSK+     G GDG RT FSRRG PRKDGKRGI+HG++HQKERFGVRR
Subjt:  IRSKTDGAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR

XP_022938515.1 RRP12-like protein [Cucurbita moschata]

3.8e-183

76.48

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        +S LERFQFLNTKGEFEEP ANADE AQNAEGNSGTREID QRCVMLELASAIIRGA++DL+DLIYKFVKF+FQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKV--SSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAM
        SRF +LV+MLIDLQSP DTSSQRSRFACFHILLVHSLKV  +S EESNKAFLMLNEIIV LKSAEE +RKAAYD+LHCIS +LKDLS TNSD HKKFVAM
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKV--SSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAM

Query:  ILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTV
        ILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLL+GKAIEVIKAVLGFVKVLVSSLQAK LQSI+SDIL+AALPWSSVS+HHFRSKVTV
Subjt:  ILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTV

Query:  ILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPS
        ILEIL+RKCGYAAIE V+P+KYKGFIK L EKRHNKTSSKDA DANTDVADS +NG               RDKQ DGL++ PKK+ +G +RKRKWEK S
Subjt:  ILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPS

Query:  GFIRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG
        GFI  K D  FTEDG RSKM KRAA S+SK      G GD RR +FSR  APRK  +RG + G KHQKERFG
Subjt:  GFIRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG

XP_038905709.1 RRP12-like protein [Benincasa hispida]

1.4e-209

85.2

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        MS LERFQFLNTKGEFEEPGANADE   NAEGN+GTREIDLQRCVMLELASAII+GADEDLIDLIYKFVKFSFQ                   EHAW AS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
        SRFPDLVDMLIDLQSP +TSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIV LKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL

Query:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL
        GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAK LQSIISDIL A LPWSSVS+HHFRSKVTVIL
Subjt:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL

Query:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF
        EILIRKCGYAAIE V+PEKYK FIKPLGEKRHNKT+SKDAGDAN DVADSSTNG              A DKQQDGLDS  KKSESG+HRKRKWEKPSG 
Subjt:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF

Query:  IRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR
        I SKTD  FTEDGGRSKMRKR ATSN+K      GLGDGRRT FSRRGAPRKDGKRGIEHG+KHQKERFGVRR
Subjt:  IRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL3 NUC173 domain-containing protein

8.2e-200

81.4

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        MS LERFQFLNTK EFEE  ANADE AQNAEG S TRE    RCVMLELA+AI+RGADEDLIDLIYKFVKFSFQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
        SRFP+LVDMLIDLQSPVDTSSQRSRF CFHILLVHSLKVSS EESNKAFLMLNEII+ LKSAEE SRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMI+
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL

Query:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL
        GYLSGASPHVKSGAISA+SVL+YEDADICLSIPDLVPS+LSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDIL AALPWSSVS+HHFRSKVTVIL
Subjt:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL

Query:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF
        EILIRKCGYAAIE  TPE YKGFIKP GEKR NKTSSKD GDANTDVAD STNG               RDKQQDGLDSLPKK+ESG+HRKRKWEKPSGF
Subjt:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF

Query:  IRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR
        IRSKTD A  EDG R KMRKRAATS+SK      G GDGRRT FSRRG PRK+GK GI+HG++HQKERFGVRR
Subjt:  IRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR

A0A1S3B7P4 RRP12-like protein

1.3e-205

82.88

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        +S LERFQFLNTK EFEEP ANADE AQNAEG S TREIDLQRCV+LELASAI+RGADEDLIDLIYKFVKFSFQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
        SRFP+LVDMLIDLQ PVDTSSQRSRFACFHILLV+SLKVSS EESNKAFLMLNEII+ LKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAH+KFVAMIL
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL

Query:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL
        GYLSGASPHVKSGAISALSVLVY+DADICLSIPDLVPSLLSLLRGKAIEVIKA LGFVKVLVSSLQAKHLQSI SDIL AALPWSSVS+HHFRSKVTVIL
Subjt:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL

Query:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF
        EILIRKCGYAAIE  TP+ YKGFIKPLGEKRHNKTS KD GDANTDVAD STN               ARDKQQDGLDSLPKKSESG+HRKRKWEKPSGF
Subjt:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGF

Query:  IRSKTDGAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR
        IRSKTD    EDGGR KMRKRAATSNSK+     G GDG RT FSRRG PRKDGKRGI+HG++HQKERFGVRR
Subjt:  IRSKTDGAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR

A0A5A7UJH3 RRP12-like protein

4.4e-201

82.54

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFS-------------FQEHAWFASSRFPDL
        +S LERFQFLNTK EFEEP ANADE AQNAEG S TREIDLQRCV+LELASAI+RGADEDLIDLIYKF                  +EHAWFASSRFP+L
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFS-------------FQEHAWFASSRFPDL

Query:  VDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGA
        VDMLIDLQ PVDTSSQRSRFACFHILLV+SLKVSS EESNKAFLMLNEII+ LKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAH+KFVAMILGYLSGA
Subjt:  VDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGA

Query:  SPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRK
        SPHVKSGAISALSVLVY+DADICLSIPDLVPSLLSLLRGKAIEVIKA LGFVKVLVSSLQAKHLQSI SDIL AALPWSSVS+HHFRSKVTVILEILIRK
Subjt:  SPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRK

Query:  CGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSKTD
        CGYAAIE  TP+ YKGFIKPLGEKRHNKTS KD GDANTDVAD STN               ARDKQQDGLDSLPKKSESG+HRKRKWEKPSGFIRSKTD
Subjt:  CGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSKTD

Query:  GAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG
            EDGGR KMRKRAATSNSK+     G GDG RT FSRRG PRKDGKRGI+HG++HQKERFG
Subjt:  GAFTEDGGRSKMRKRAATSNSKS-----GLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG

A0A6J1DUR8 RRP12-like protein

2.7e-182

Show/hide

Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        MS LERFQFLNTKGEFEEPG NADE AQNAEG+ GTR++DLQRCVMLELASAII+GADEDLIDLIYKFVK SFQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL
        SRF +L D+LIDLQSPVDTSSQRSRFACFHILLVHSLK+SS EE+N+AFLMLNEIIV LKSAEEGSRK AYD+LHCISCSLKDLSHTNSDAH+KFV M+L
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIL

Query:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL
        GYLSGASPHVKSGAISALSVLVYEDADIC+SIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSS QAKHLQSII DIL+A LPWSSVS+HHFRSKVT+IL
Subjt:  GYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVIL

Query:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTD--VADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPS
        EILIRKCGYAA E VTPEKYK FI+ L EKRH+KTSSKDAGD +TD  VADSS+N               AR KQ DG+DS+PK + SG+HRKRK EK S
Subjt:  EILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTD--VADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPS

Query:  GFIRSKTDG-AFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR
             KTD   FT+DGGRSKMRKRA  S ++      GLGDGR+ NF+R GAPRK G  GI  G+K QKERFGV +
Subjt:  GFIRSKTDG-AFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFGVRR

A0A6J1FK07 RRP12-like protein

1.8e-183

76.48

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Query:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS
        +S LERFQFLNTKGEFEEP ANADE AQNAEGNSGTREID QRCVMLELASAIIRGA++DL+DLIYKFVKF+FQ                   EHAWFAS
Subjt:  MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQ-------------------EHAWFAS

Query:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKV--SSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAM
        SRF +LV+MLIDLQSP DTSSQRSRFACFHILLVHSLKV  +S EESNKAFLMLNEIIV LKSAEE +RKAAYD+LHCIS +LKDLS TNSD HKKFVAM
Subjt:  SRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKV--SSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAM

Query:  ILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTV
        ILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLL+GKAIEVIKAVLGFVKVLVSSLQAK LQSI+SDIL+AALPWSSVS+HHFRSKVTV
Subjt:  ILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTV

Query:  ILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPS
        ILEIL+RKCGYAAIE V+P+KYKGFIK L EKRHNKTSSKDA DANTDVADS +NG               RDKQ DGL++ PKK+ +G +RKRKWEK S
Subjt:  ILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPS

Query:  GFIRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG
        GFI  K D  FTEDG RSKM KRAA S+SK      G GD RR +FSR  APRK  +RG + G KHQKERFG
Subjt:  GFIRSKTDGAFTEDGGRSKMRKRAATSNSK-----SGLGDGRRTNFSRRGAPRKDGKRGIEHGSKHQKERFG

SwissProt top hits

e value

%identity

Alignment

Q12754 Ribosomal RNA-processing protein 12

4.9e-16

24.54

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Query:  MLELASAIIRGADEDLIDLIYKFV-KFSFQEHAWFASSRF-PDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSA
        +  + S  +  AD  +    Y+ + K S  +    A ++F  D+ ++++D  S V TS++ +R      +    +++  ++  +     + E+I+  K  
Subjt:  MLELASAIIRGADEDLIDLIYKFV-KFSFQEHAWFASSRF-PDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSA

Query:  EEGSRKAAYDILHCISCSLKD---------------LSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYE-----DADICLSIPDLVPSLLSL
         E SR+ A+D L C+   + +                +   S +  +F  +I   L G S H+ S +I+  + LV+E     D+ I + I D +   L+ 
Subjt:  EEGSRKAAYDILHCISCSLKD---------------LSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYE-----DADICLSIPDLVPSLLSL

Query:  LRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGD
            + E++K+ +GF KV V  L  + ++  + ++L+  L WS     HF++KV  I+E LIR+ GY  IE   PE+ +  +  +  K  N+   KD  +
Subjt:  LRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGD

Query:  ANTDVADSSTNGSISFVSS--QLVFG
          T V+D +      F+S+  + V+G
Subjt:  ANTDVADSSTNGSISFVSS--QLVFG

Q5JTH9 RRP12-like protein

1.5e-12

22.31

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Query:  DLQRCVMLELASAIIRGADEDLIDLIYKFVK-------FSFQEHAW----------------FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVH
        D  R  +L+L  A+   ADE  I  +Y  ++          Q+ A+                F  S   DL   L+D      + ++R R  C    L+H
Subjt:  DLQRCVMLELASAIIRGADEDLIDLIYKFVK-------FSFQEHAW----------------FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVH

Query:  SLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADI--CLSIP
         ++  S E       ++ E+I+  K    G+RK A+ +L  +  +         +A + ++ +I   L GA   V S +I AL+ L++E   +    ++ 
Subjt:  SLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADI--CLSIP

Query:  DLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGE----
         L+ ++  LL  +  +V+K+ LGF+KV V+ +   HL   +  ++ A    S   + HFR K+  +    IRK G+  ++ + PE+Y   +  + +    
Subjt:  DLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGE----

Query:  -KRHNKTSSKDAGDANTDVADSS-TNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSG
         KRH   S     +   +  +     G    +   L       D +++      ++ +    R R W K  G
Subjt:  -KRHNKTSSKDAGDANTDVADSS-TNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSG

Q5ZKD5 RRP12-like protein

8.1e-11

24.72

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Query:  FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVA
        F  S   +L  +L+D      + ++R R  C    L H +K  S E       ++ E+I+  K    G+RK A+ +L  +  +      T  +A ++F+ 
Subjt:  FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVA

Query:  MILGYLSGASPHVKSGAISALSVLVYEDAD-ICLSIPD-LVPSLLSLLRGKAIEVIKAVLGFVKVLV----SSLQAKHLQSIISDILIAALPWSSVSKHH
        ++   L+G+   + S  + AL+ L +E  D + L++ + L+ ++  LL  +  +V+KA LGF+KV++    ++L AKH+Q+++     A    S   + H
Subjt:  MILGYLSGASPHVKSGAISALSVLVYEDAD-ICLSIPD-LVPSLLSLLRGKAIEVIKAVLGFVKVLV----SSLQAKHLQSIISDILIAALPWSSVSKHH

Query:  FRSKVTVILEILIRKCGYAAIEDVTPEKYKGFI----KPLGEKRHNKTSSKDAGDANTDVADSSTNG
        FR K+  +    IRK G+  ++ + P ++   +    K     R  +   + A +A  + A +   G
Subjt:  FRSKVTVILEILIRKCGYAAIEDVTPEKYKGFI----KPLGEKRHNKTSSKDAGDANTDVADSSTNG

Q6P5B0 RRP12-like protein

6.0e-14

24.39

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Query:  DLQRCVMLELASAIIRGADEDLIDLIYKFVK-------FSFQEHAW----------------FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVH
        D  R  +L+L  A+   +DE  I  +Y  ++          Q+ A+                F  S   DL   L+D      + ++R R  C    L+H
Subjt:  DLQRCVMLELASAIIRGADEDLIDLIYKFVK-------FSFQEHAW----------------FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVH

Query:  SLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADI--CLSIP
         +K  S E       ++ E+I+  K    G+RK+A+ +L  +  +         DA ++++ +I   L GA   V S +I AL+ L++E   +    ++ 
Subjt:  SLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADI--CLSIP

Query:  DLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKY
         L+ ++  LL  +  +V+K+ LGF+KV V  +   HL   +  ++ A    S   + HFR K+  +     RK G+  ++ + P +Y
Subjt:  DLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKY

Q9C0X8 Putative ribosomal RNA-processing protein 12

8.7e-13

27.47

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Query:  FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSL---KDLSHTNSDAHKK
        +A+    ++ + L  +   V +S+++ R A  + L     ++ S E       +L E I+ LK   E +R  A+ +L  I+ S     +  ++  +  +K
Subjt:  FASSRFPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSL---KDLSHTNSDAHKK

Query:  FVAMILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSL---LRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHH
        FV++I   L+G+S H+ S  I A+S +V E   + +S P LV  + +L   +     E+ KA + F+K+ VSS   + ++ ++ +++   L WS   K +
Subjt:  FVAMILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSL---LRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHH

Query:  FRSKVTVILEILIRKCGYAAIEDVTPEKYKGFI
         R KV  + E + RK G A IE   P + K  I
Subjt:  FRSKVTVILEILIRKCGYAAIEDVTPEKYKGFI

Arabidopsis top hits

e value

%identity

Alignment

AT2G34357.1 ARM repeat superfamily protein

5.5e-23

23.32

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Query:  RCVMLELASAIIRGADEDLIDLIYKFVKFSFQEHAWFASSR----------------FPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEE-
        R  + +L  +++ G D   +D I+  +K + Q+       +                  +L ++L+ + +    S++R +  C + LL H+ +   ++E 
Subjt:  RCVMLELASAIIRGADEDLIDLIYKFVKFSFQEHAWFASSR----------------FPDLVDMLIDLQSPVDTSSQRSRFACFHILLVHSLKVSSVEE-

Query:  SNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSH--TNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSL
         +     L E+I+ LK   + +R  AYD+L  I  +  D  +   N   H  F  M++G L+G  P + S A+  ++ L YE +D+  S  +L+PS   L
Subjt:  SNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSH--TNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSLLSL

Query:  LRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAG-
        L+ K  E+ KA LG +KVLV+    + L + +  ++   L W   +K+ F++KV ++LE+LI+KCG  A++ V PE++   +  + + +  K     AG 
Subjt:  LRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAG-

Query:  DANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSK--------------------TDGAFTEDGGR-SKMRK
        D +       T+  +S  +   +F  +  D +    D +  +S          +  +  +RSK                     D   T    R S++RK
Subjt:  DANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSK--------------------TDGAFTEDGGR-SKMRK

Query:  RAATSNSKSGLG-DGRRTNFSRRGAPRKD------------GKRGIEHGSKHQKERFGVRRCNWEHNGNEYEQSRS
        R A S+ ++    +GR        + RK+            G R   + SK  ++R       + + G EY   ++
Subjt:  RAATSNSKSGLG-DGRRTNFSRRGAPRKD------------GKRGIEHGSKHQKERFGVRRCNWEHNGNEYEQSRS

AT4G23540.1 ARM repeat superfamily protein

5.1e-77

40.94

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Query:  TKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSF-------------------QEHAWFASSRFPDLVDMLI
        T+G+  +   + DE+ +N      + +  L+R  +L+LAS+ + GA EDLI+LIY  V+ SF                   QEH WF +S F ++++ML+
Subjt:  TKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSF-------------------QEHAWFASSRFPDLVDMLI

Query:  DLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSD-AHKKFVAMILGYLSGASPHV
          ++P D +S RSRFAC H+L+ H ++ S+ EE+ KAFL+LNE+I+ LK  +E  RKAA D L  +  +LK+ S   SD    K + MI GY+SG SPH+
Subjt:  DLQSPVDTSSQRSRFACFHILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSD-AHKKFVAMILGYLSGASPHV

Query:  KSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYA
        +SGA+SALS LVY+D +ICLS P+L+ S+LSLL  K+IE+IKAVLGFVKVLVS+ QA+ L S++ ++L   LPWSSVS+H+F+SKVT+I+EI++RKCG  
Subjt:  KSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYA

Query:  AIEDVTPEKYKGFIKPLGEKRHNKTSSK-DAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHR-KRKWEK--PSGFIRSKTD
        A++  TP+K+K FI+ + E R  K+  K +  ++ T   D S              G   R+ ++   ++  K+  + + R KR +++  P+  I     
Subjt:  AIEDVTPEKYKGFIKPLGEKRHNKTSSK-DAGDANTDVADSSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHR-KRKWEK--PSGFIRSKTD

Query:  GAFTEDGGRSKMRKRAATSNS-KSG
        G     G RS  ++R A+ N+ KSG
Subjt:  GAFTEDGGRSKMRKRAATSNS-KSG

Sequences

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CDS sequence

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ATGTCATTTCTTGAGAGGTTTCAGTTTCTAAATACTAAGGGTGAGTTTGAGGAGCCAGGAGCCAATGCTGATGAACAAGCTCAGAATGCTGAAGGAAATTCTGGGACAAG
AGAGATTGATCTTCAAAGATGTGTAATGTTGGAGCTAGCTTCAGCTATCATCAGGGGAGCTGATGAAGATCTAATTGATCTAATCTATAAATTTGTTAAGTTCTCTTTCC
AGGAACATGCTTGGTTTGCTTCTTCTAGATTTCCTGACCTGGTAGATATGTTAATTGATCTGCAATCTCCTGTTGATACTTCATCTCAAAGAAGTCGGTTTGCTTGCTTC
CACATTCTTCTGGTTCATTCATTGAAGGTTAGCTCGGTAGAGGAGAGCAACAAGGCTTTTCTTATGCTCAACGAGATCATAGTTGGATTAAAAAGTGCAGAAGAAGGCAG
CAGGAAAGCAGCTTATGACATTCTTCATTGTATCAGTTGCAGCCTAAAAGATTTGTCACATACAAATTCTGATGCACATAAAAAATTTGTGGCCATGATATTGGGCTATC
TATCTGGTGCATCTCCTCACGTAAAGAGTGGAGCAATCTCTGCACTCTCAGTTCTGGTCTATGAAGACGCAGATATATGTCTTTCAATCCCTGATCTTGTGCCTTCCCTC
TTATCTTTGCTACGAGGAAAGGCTATAGAAGTTATAAAAGCAGTGCTAGGGTTTGTGAAAGTTTTAGTGTCTTCCTTGCAAGCTAAGCATCTTCAGAGCATCATTTCTGA
TATTCTTATAGCGGCTCTACCTTGGTCGTCTGTCTCAAAGCATCATTTTAGATCGAAGGTCACAGTGATTTTGGAGATTCTCATACGAAAATGTGGTTATGCTGCAATTG
AGGATGTTACTCCTGAAAAATACAAGGGTTTCATCAAACCTCTTGGGGAGAAACGGCATAACAAGACCAGTTCCAAGGATGCTGGTGATGCTAATACAGATGTTGCAGAT
TCATCTACTAATGGGTCTATATCATTTGTTTCAAGCCAACTTGTTTTCGGTATGTTGGCAAGGGATAAGCAACAGGATGGGCTGGATTCTCTTCCCAAGAAAAGTGAATC
AGGTTATCACAGGAAAAGGAAGTGGGAAAAACCTTCTGGTTTCATCAGGAGCAAAACTGATGGTGCATTCACTGAGGATGGTGGTAGATCTAAGATGAGAAAAAGAGCTG
CGACCTCCAATAGTAAGAGTGGTTTAGGAGACGGTCGCAGAACAAATTTTTCAAGGCGTGGTGCTCCTAGAAAAGATGGAAAGAGAGGGATCGAACATGGAAGCAAGCAT
CAGAAAGAAAGATTTGGAGTTCGAAGATGCAACTGGGAACACAATGGAAACGAATACGAGCAAAGCAGGTCCTTTTCCTACGATTATTTACAAGAAGGAACTTCAATGCC
AACCTCTAAATGTCTTGATGGTGGTAGTGGTGGTGGCGCCGGCAGCAGCGAATTGATCAGCTTAACAGCGTGA

mRNA sequence

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Protein sequence

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MSFLERFQFLNTKGEFEEPGANADEQAQNAEGNSGTREIDLQRCVMLELASAIIRGADEDLIDLIYKFVKFSFQEHAWFASSRFPDLVDMLIDLQSPVDTSSQRSRFACF
HILLVHSLKVSSVEESNKAFLMLNEIIVGLKSAEEGSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMILGYLSGASPHVKSGAISALSVLVYEDADICLSIPDLVPSL
LSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILIAALPWSSVSKHHFRSKVTVILEILIRKCGYAAIEDVTPEKYKGFIKPLGEKRHNKTSSKDAGDANTDVAD
SSTNGSISFVSSQLVFGMLARDKQQDGLDSLPKKSESGYHRKRKWEKPSGFIRSKTDGAFTEDGGRSKMRKRAATSNSKSGLGDGRRTNFSRRGAPRKDGKRGIEHGSKH
QKERFGVRRCNWEHNGNEYEQSRSFSYDYLQEGTSMPTSKCLDGGSGGGAGSSELISLTA

HG10019782 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome