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HG10019801 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019801
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Rev like
Genome locationChr04:25601688..25602195
RNA-Seq ExpressionHG10019801
SyntenyHG10019801
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053852.1 hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]1.2e-2885.06Show/hide
Query:  FFLLFLALSFLLSSS---AVPTTRILKSTFD-HPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
        FFLLFLA SFLLSSS   AVPTTRILKSTF+ HPS Q  V +DVRDLEI DGDSFERLFEGRLILENNDYPGTGANNHHDPKSPA+P
Subjt:  FFLLFLALSFLLSSS---AVPTTRILKSTFD-HPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP

KAG6580910.1 hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2475Show/hide
Query:  KFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
        +  LLFL  S LLSS AVPTTRI KSTFD PSAQDFVFQDVRDLE N GD F     GR +LENNDYPGTGANNHHDP +PAKP
Subjt:  KFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP

KAG6596972.1 hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2372.41Show/hide
Query:  LKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSF----ERLFEGRLILENNDYPGTGANNHHDPKSPA
        L F LLFLA +FL+SS+AVPTTR+L+S FD PSAQ  VFQD RDLEI+  DS     ERL EGR++LENNDYPGTGANNHHDPKSPA
Subjt:  LKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSF----ERLFEGRLILENNDYPGTGANNHHDPKSPA

KAG7017658.1 hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]8.3e-2576.19Show/hide
Query:  KFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
        +  LLFL  S LLSS AVPTTRI KSTFD PSAQDFVFQDVRDLE N GD F     GRL+LENNDYPGTGANNHHDP +PAKP
Subjt:  KFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP

KGN59481.1 hypothetical protein Csa_001422 [Cucumis sativus]1.3e-3087.21Show/hide
Query:  FFLLFLALSFLLSSS---AVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
        FFLLFLA SFLLSS+   AVPTTRILKSTFDHPS Q  V QDVRD+EI DGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
Subjt:  FFLLFLALSFLLSSS---AVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP

TrEMBL top hitse value%identityAlignment
A0A0A0LHJ0 Uncharacterized protein6.4e-3187.21Show/hide
Query:  FFLLFLALSFLLSSS---AVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
        FFLLFLA SFLLSS+   AVPTTRILKSTFDHPS Q  V QDVRD+EI DGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
Subjt:  FFLLFLALSFLLSSS---AVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP

A0A5A7UDI6 Uncharacterized protein6.0e-2985.06Show/hide
Query:  FFLLFLALSFLLSSS---AVPTTRILKSTFD-HPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP
        FFLLFLA SFLLSSS   AVPTTRILKSTF+ HPS Q  V +DVRDLEI DGDSFERLFEGRLILENNDYPGTGANNHHDPKSPA+P
Subjt:  FFLLFLALSFLLSSS---AVPTTRILKSTFD-HPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP

A0A5B6ZB32 Uncharacterized protein (Fragment)4.2e-1453.57Show/hide
Query:  LKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAK
        L+  +LFL   F+LSS+AVPT+R LKS    P+AQD   Q V D+  +     ER  EGR+ +E+NDYPGTGANNHHDPK+P +
Subjt:  LKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAK

A0A5J4ZL62 Uncharacterized protein1.2e-1660Show/hide
Query:  LKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLF-EGRLILENNDYPGTGANNHHDPKSPAK
        L+  +LFL LSF+LS++AVPT+R LKS  + P+AQDF+ Q V D++  DG+  ER F EGR+ LE+NDYPGTGANNHHDPK+P +
Subjt:  LKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLF-EGRLILENNDYPGTGANNHHDPKSPAK

A0A6A6KJS2 Uncharacterized protein1.4e-1456.18Show/hide
Query:  SLKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSA-QDFVFQDVRDLEINDG---DSFERLFEGRLILENNDYPGTGANNHHDPKSPAK
        S++  LLFL  SF+LSS AVP+TR LKST ++PS+ QDF+ QD  DL + +    D  E    GR+ LEN DYPGTGANNHHDPK+P +
Subjt:  SLKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSA-QDFVFQDVRDLEINDG---DSFERLFEGRLILENNDYPGTGANNHHDPKSPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCCTCAAGTTCTTCCTTCTCTTTCTGGCTCTCTCCTTTCTTCTTTCTTCTTCTGCTGTTCCCACCACAAGAATCCTCAAATCAACTTTTGATCACCCATCTGC
CCAAGATTTCGTTTTTCAGGATGTGAGAGATTTGGAGATAAATGATGGAGATTCATTCGAAAGATTGTTCGAAGGAAGATTGATTTTGGAGAATAATGATTATCCTGGAA
CAGGGGCAAACAATCACCATGATCCAAAATCTCCTGCAAAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCCTCAAGTTCTTCCTTCTCTTTCTGGCTCTCTCCTTTCTTCTTTCTTCTTCTGCTGTTCCCACCACAAGAATCCTCAAATCAACTTTTGATCACCCATCTGC
CCAAGATTTCGTTTTTCAGGATGTGAGAGATTTGGAGATAAATGATGGAGATTCATTCGAAAGATTGTTCGAAGGAAGATTGATTTTGGAGAATAATGATTATCCTGGAA
CAGGGGCAAACAATCACCATGATCCAAAATCTCCTGCAAAACCATAA
Protein sequenceShow/hide protein sequence
MGSLKFFLLFLALSFLLSSSAVPTTRILKSTFDHPSAQDFVFQDVRDLEINDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPAKP