; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019819 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019819
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr04:25783934..25786768
RNA-Seq ExpressionHG10019819
SyntenyHG10019819
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022983729.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita maxima]1.2e-11793.27Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF RMPERNVVSWNTVITALM+ RRVDEAQELFNQMPERDVISWTAMVAGL+KNGRIDDARL+FDKM +RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNMRLDEAFELFE++PERD+PSWN MITG IQNGKLERAVDLFYKMPNKNVV+WTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

XP_023527853.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita pepo subsp. pepo]1.2e-11793.27Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF RMPERNVVSWNTVITALM+ RRVDEAQELFNQMPERDVISWTAMVAGL+KNGRIDDARL+FDKM +RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNMRLDEAFELFE++PERD+PSWN MITG IQNGKLERAVDLFYKMPNKNVV+WTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

XP_038906177.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X1 [Benincasa hispida]5.7e-12397.31Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF+RMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKM KRNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNMRLDEAFELFEQMPERD+PSWNTMITG IQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

XP_038906178.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X2 [Benincasa hispida]5.7e-12397.31Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF+RMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKM KRNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNMRLDEAFELFEQMPERD+PSWNTMITG IQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

XP_038906180.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X3 [Benincasa hispida]5.7e-12397.31Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF+RMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKM KRNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNMRLDEAFELFEQMPERD+PSWNTMITG IQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

TrEMBL top hitse value%identityAlignment
A0A0A0LCG2 Uncharacterized protein1.7e-11289.24Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNV+SWNTMIEGYARKGW++QA DLF++MPERNVVSWNTVITA MQ RRVDEAQELFN+MPERDVISWT MVAGLSKNGRIDDARLLFDKM  RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWN MI GYAQNMRLDEAF+LFEQMPER+L SWNTMITG IQNGKLERAVD FYKM NKNVVTWTA+ISGHVQDG+SEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACS LA LCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

A0A6J1DWF0 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X11.4e-11489.69Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNV+SWNTMIEGY R+GWV+QAFDLF+RMPERNVVSWNT+ITALMQCRRVDEA ELF+QMPERDVISWTAMVAGLSKNGRID+ARL+FD+M  RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNM+LDEA ELFE+MPERDLPSWNTMI G IQNGKLERAVDLF+KMPNKNVV+WTAMISGHVQDGQSEEALKIFSEMQ A NVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

A0A6J1DZR6 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X21.4e-11489.69Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNV+SWNTMIEGY R+GWV+QAFDLF+RMPERNVVSWNT+ITALMQCRRVDEA ELF+QMPERDVISWTAMVAGLSKNGRID+ARL+FD+M  RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNM+LDEA ELFE+MPERDLPSWNTMI G IQNGKLERAVDLF+KMPNKNVV+WTAMISGHVQDGQSEEALKIFSEMQ A NVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

A0A6J1F4K7 pentatricopeptide repeat-containing protein At2g35030, mitochondrial3.0e-11792.83Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF RMPERNVVSWNTVITALM+ RRVDEAQELFNQMPERDVISWTAMVAGL+KNGRIDDARL+FDKM +RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQN RLDEAFELFE++PERD+PSWN MITG IQNGKLERAVDLFYKMPNKNVV+WTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

A0A6J1J8B4 pentatricopeptide repeat-containing protein At2g35030, mitochondrial6.0e-11893.27Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MPVKNVVSWNTMIEGYARKGWV+QAFDLF RMPERNVVSWNTVITALM+ RRVDEAQELFNQMPERDVISWTAMVAGL+KNGRIDDARL+FDKM +RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNA+ITGYAQNMRLDEAFELFE++PERD+PSWN MITG IQNGKLERAVDLFYKMPNKNVV+WTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VSVLGACSNLAGLCEGQQIHQII
Subjt:  VSVLGACSNLAGLCEGQQIHQII

SwissProt top hitse value%identityAlignment
O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial3.2e-8462.78Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +NVVSWNTMI+GYA+ G +++A +LFD MPERN+VSWN+++ AL+Q  R+DEA  LF +MP RDV+SWTAMV GL+KNG++D+AR LFD M +RN++
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNAMITGYAQN R+DEA +LF+ MPERD  SWNTMITG I+N ++ +A  LF +MP KNV++WT MI+G+V++ ++EEAL +FS+M    +VKPN GT+
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VS+L ACS+LAGL EGQQIHQ+I
Subjt:  VSVLGACSNLAGLCEGQQIHQII

P0C7R0 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial1.1e-4742.55Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +N+V+ N M+ GY +   +N+A+ LF  MP +NVVSW  ++TAL    R ++A ELF++MPER+V+SW  +V GL +NG ++ A+ +FD M  R+VV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQA-ANNVKPNEGT
        SWNAMI GY +N  ++EA  LF  M E+++ +W +M+ G  + G +  A  LF +MP +N+V+WTAMISG   +    EAL +F EM+   + V PN  T
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQA-ANNVKPNEGT

Query:  FVSVLGACSNLAGLCE--GQQIH-QIIRNQEKKVE
         +S+  AC  L       G+Q+H Q+I N  + V+
Subjt:  FVSVLGACSNLAGLCE--GQQIH-QIIRNQEKKVE

Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial3.6e-5138.52Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +NVVSW  +++GY   G V+ A  LF +MPE+N VSW  ++   +Q  R+D+A +L+  +P++D I+ T+M+ GL K GR+D+AR +FD+M +R+V+
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANN--------
        +W  M+TGY QN R+D+A ++F+ MPE+   SW +M+ G +QNG++E A +LF  MP K V+   AMISG  Q G+  +A ++F  M+  N+        
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANN--------

Query:  ----------------------VKPNEGTFVSVLGACSNLAGLCEGQQIH-QIIRNQ
                              V+P   T +S+L  C++LA L  G+Q+H Q++R Q
Subjt:  ----------------------VKPNEGTFVSVLGACSNLAGLCEGQQIH-QIIRNQ

Q9FXB9 Pentatricopeptide repeat-containing protein At1g56690, mitochondrial3.6e-5140.64Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +NVVSW  M++GY ++G V +A  LF RMPERN VSW  +   L+   R+D+A++L++ MP +DV++ T M+ GL + GR+D+ARL+FD+MR+RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVV-------------------------------TWTAMIS
        +W  MITGY QN R+D A +LFE MPE+   SW +M+ G   +G++E A + F  MP K V+                               TW  MI 
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVV-------------------------------TWTAMIS

Query:  GHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIH
         + + G   EAL +F++MQ    V+P+  + +S+L  C+ LA L  G+Q+H
Subjt:  GHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIH

Q9SY02 Pentatricopeptide repeat-containing protein At4g027503.4e-5446.51Show/hide
Query:  VVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVVSWNAM
        +VSWN ++ G+ +K  + +A   FD M  R+VVSWNT+IT   Q  ++DEA++LF++ P +DV +WTAMV+G  +N  +++AR LFDKM +RN VSWNAM
Subjt:  VVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVVSWNAM

Query:  ITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLG
        + GY Q  R++ A ELF+ MP R++ +WNTMITG  Q GK+  A +LF KMP ++ V+W AMI+G+ Q G S EAL++F +M+     + N  +F S L 
Subjt:  ITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLG

Query:  ACSNLAGLCEGQQIH
         C+++  L  G+Q+H
Subjt:  ACSNLAGLCEGQQIH

Arabidopsis top hitse value%identityAlignment
AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein2.5e-5238.52Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +NVVSW  +++GY   G V+ A  LF +MPE+N VSW  ++   +Q  R+D+A +L+  +P++D I+ T+M+ GL K GR+D+AR +FD+M +R+V+
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANN--------
        +W  M+TGY QN R+D+A ++F+ MPE+   SW +M+ G +QNG++E A +LF  MP K V+   AMISG  Q G+  +A ++F  M+  N+        
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANN--------

Query:  ----------------------VKPNEGTFVSVLGACSNLAGLCEGQQIH-QIIRNQ
                              V+P   T +S+L  C++LA L  G+Q+H Q++R Q
Subjt:  ----------------------VKPNEGTFVSVLGACSNLAGLCEGQQIH-QIIRNQ

AT1G32415.1 pentatricopeptide (PPR) repeat-containing protein7.6e-4942.55Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +N+V+ N M+ GY +   +N+A+ LF  MP +NVVSW  ++TAL    R ++A ELF++MPER+V+SW  +V GL +NG ++ A+ +FD M  R+VV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQA-ANNVKPNEGT
        SWNAMI GY +N  ++EA  LF  M E+++ +W +M+ G  + G +  A  LF +MP +N+V+WTAMISG   +    EAL +F EM+   + V PN  T
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQA-ANNVKPNEGT

Query:  FVSVLGACSNLAGLCE--GQQIH-QIIRNQEKKVE
         +S+  AC  L       G+Q+H Q+I N  + V+
Subjt:  FVSVLGACSNLAGLCE--GQQIH-QIIRNQEKKVE

AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein2.5e-5240.64Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +NVVSW  M++GY ++G V +A  LF RMPERN VSW  +   L+   R+D+A++L++ MP +DV++ T M+ GL + GR+D+ARL+FD+MR+RNVV
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVV-------------------------------TWTAMIS
        +W  MITGY QN R+D A +LFE MPE+   SW +M+ G   +G++E A + F  MP K V+                               TW  MI 
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVV-------------------------------TWTAMIS

Query:  GHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIH
         + + G   EAL +F++MQ    V+P+  + +S+L  C+ LA L  G+Q+H
Subjt:  GHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIH

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein2.3e-8562.78Show/hide
Query:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV
        MP +NVVSWNTMI+GYA+ G +++A +LFD MPERN+VSWN+++ AL+Q  R+DEA  LF +MP RDV+SWTAMV GL+KNG++D+AR LFD M +RN++
Subjt:  MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVV

Query:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF
        SWNAMITGYAQN R+DEA +LF+ MPERD  SWNTMITG I+N ++ +A  LF +MP KNV++WT MI+G+V++ ++EEAL +FS+M    +VKPN GT+
Subjt:  SWNAMITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTF

Query:  VSVLGACSNLAGLCEGQQIHQII
        VS+L ACS+LAGL EGQQIHQ+I
Subjt:  VSVLGACSNLAGLCEGQQIHQII

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-5546.51Show/hide
Query:  VVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVVSWNAM
        +VSWN ++ G+ +K  + +A   FD M  R+VVSWNT+IT   Q  ++DEA++LF++ P +DV +WTAMV+G  +N  +++AR LFDKM +RN VSWNAM
Subjt:  VVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVVSWNAM

Query:  ITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLG
        + GY Q  R++ A ELF+ MP R++ +WNTMITG  Q GK+  A +LF KMP ++ V+W AMI+G+ Q G S EAL++F +M+     + N  +F S L 
Subjt:  ITGYAQNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLG

Query:  ACSNLAGLCEGQQIH
         C+++  L  G+Q+H
Subjt:  ACSNLAGLCEGQQIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGTTAAGAATGTTGTGTCGTGGAACACTATGATTGAAGGGTATGCGCGAAAGGGTTGGGTCAATCAGGCTTTTGATTTGTTTGATAGAATGCCTGAGAGGAATGT
TGTTTCTTGGAATACTGTTATTACGGCATTGATGCAATGTAGGAGGGTAGATGAAGCTCAGGAGCTCTTTAATCAGATGCCGGAGAGAGATGTGATTTCTTGGACGGCAA
TGGTGGCTGGTTTGTCGAAAAATGGGAGAATTGATGACGCCCGATTACTGTTTGATAAAATGCGGAAGCGGAATGTGGTTTCCTGGAATGCAATGATTACTGGGTATGCT
CAGAATATGCGGCTTGATGAGGCATTTGAACTGTTTGAGCAAATGCCAGAGAGGGATTTGCCTTCATGGAACACTATGATTACAGGGCTCATTCAAAACGGTAAACTAGA
AAGGGCAGTGGATTTATTCTATAAAATGCCCAACAAAAATGTTGTCACTTGGACGGCAATGATTTCTGGACATGTTCAAGATGGGCAAAGTGAAGAAGCATTGAAGATCT
TTTCAGAAATGCAAGCAGCAAACAATGTAAAACCAAATGAAGGAACTTTTGTCAGTGTGTTGGGTGCTTGTAGTAACTTAGCTGGTCTTTGTGAGGGACAACAAATTCAC
CAGATAATAAGAAATCAAGAGAAAAAAGTGGAGAAATGTCAAACAAACATAAAATTTGCTTCTGGAGATGGAAAATCTTGTTTGGTAGTCCAAGGCTCCAAGCTCTCTTC
AATGAGTCTGCTCAAATTTCCTGTTATTAATATCCACTCCATCTCTCTTGCCAGCCATATTCACAGGCAAATGGAAAACAGGGAAGCAAACTTGTACGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGTTAAGAATGTTGTGTCGTGGAACACTATGATTGAAGGGTATGCGCGAAAGGGTTGGGTCAATCAGGCTTTTGATTTGTTTGATAGAATGCCTGAGAGGAATGT
TGTTTCTTGGAATACTGTTATTACGGCATTGATGCAATGTAGGAGGGTAGATGAAGCTCAGGAGCTCTTTAATCAGATGCCGGAGAGAGATGTGATTTCTTGGACGGCAA
TGGTGGCTGGTTTGTCGAAAAATGGGAGAATTGATGACGCCCGATTACTGTTTGATAAAATGCGGAAGCGGAATGTGGTTTCCTGGAATGCAATGATTACTGGGTATGCT
CAGAATATGCGGCTTGATGAGGCATTTGAACTGTTTGAGCAAATGCCAGAGAGGGATTTGCCTTCATGGAACACTATGATTACAGGGCTCATTCAAAACGGTAAACTAGA
AAGGGCAGTGGATTTATTCTATAAAATGCCCAACAAAAATGTTGTCACTTGGACGGCAATGATTTCTGGACATGTTCAAGATGGGCAAAGTGAAGAAGCATTGAAGATCT
TTTCAGAAATGCAAGCAGCAAACAATGTAAAACCAAATGAAGGAACTTTTGTCAGTGTGTTGGGTGCTTGTAGTAACTTAGCTGGTCTTTGTGAGGGACAACAAATTCAC
CAGATAATAAGAAATCAAGAGAAAAAAGTGGAGAAATGTCAAACAAACATAAAATTTGCTTCTGGAGATGGAAAATCTTGTTTGGTAGTCCAAGGCTCCAAGCTCTCTTC
AATGAGTCTGCTCAAATTTCCTGTTATTAATATCCACTCCATCTCTCTTGCCAGCCATATTCACAGGCAAATGGAAAACAGGGAAGCAAACTTGTACGGATGA
Protein sequenceShow/hide protein sequence
MPVKNVVSWNTMIEGYARKGWVNQAFDLFDRMPERNVVSWNTVITALMQCRRVDEAQELFNQMPERDVISWTAMVAGLSKNGRIDDARLLFDKMRKRNVVSWNAMITGYA
QNMRLDEAFELFEQMPERDLPSWNTMITGLIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIH
QIIRNQEKKVEKCQTNIKFASGDGKSCLVVQGSKLSSMSLLKFPVINIHSISLASHIHRQMENREANLYG