; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019864 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019864
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationChr04:26292902..26295680
RNA-Seq ExpressionHG10019864
SyntenyHG10019864
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003617 - Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044805 - Mediator of RNA polymerase II transcription subunit 26a/b-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136624.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus]5.8e-23996.47Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDF  DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD+WV+ATAAVQGAEVTPDSKNKSAAVKEEDD+ EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNPTRCNQQTTREVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+WANGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_008443218.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo]1.1e-24096.91Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWK+MVDVWV+ATAAVQGAEVTPDSK+KSAAVKEEDD+ EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNPTRCNQQTTREVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRHW NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_023539160.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucurbita pepo subsp. pepo]7.4e-21085.84Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        M+AKS SLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   DGETGFKSD AGDG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD LQATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HL R LI EWKEMVD+WVKATAAV G+EVTPDSK+  A+ +EEDD+  E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK  +N RK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TSNG+QNP RC QQTTREVNV+AK+NK+QMKEQVVKPNKP SN NSGL RPQK S+ QKDNHEK QRK++KPTIPKR+ QD FKCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG+NRHW NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_038904902.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida]4.7e-24196.9Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD WVKATAAVQGAEVTPDSKNKSA+VKEED++EEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TSNGNQNP R NQQT  EVNVLAKEN TQMKEQVVKPN+PSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQ N+KCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNR+WANGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_038904903.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida]2.2e-23896.46Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD WVKATAAVQ  EVTPDSKNKSA+VKEED++EEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TSNGNQNP R NQQT  EVNVLAKEN TQMKEQVVKPN+PSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQ N+KCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNR+WANGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

TrEMBL top hitse value%identityAlignment
A0A0A0LBK9 TFIIS N-terminal domain-containing protein2.8e-23996.47Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDF  DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD+WV+ATAAVQGAEVTPDSKNKSAAVKEEDD+ EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNPTRCNQQTTREVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+WANGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A1S3B7K4 probable mediator of RNA polymerase II transcription subunit 26b5.1e-24196.91Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWK+MVDVWV+ATAAVQGAEVTPDSK+KSAAVKEEDD+ EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNPTRCNQQTTREVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRHW NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A5A7UDQ2 Putative mediator of RNA polymerase II transcription subunit 26b5.1e-24196.91Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWK+MVDVWV+ATAAVQGAEVTPDSK+KSAAVKEEDD+ EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNPTRCNQQTTREVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRHW NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A6J1FCK1 probable mediator of RNA polymerase II transcription subunit 26b3.0e-20985.62Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   DGETGFKSD AGDG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD LQATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HL R LI EWKEMVD+WVKATAAV G+EVTPDSK+   + +EEDD+  E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TS+G+QNP RC QQTTREVNV+AK+NK+QMKEQVVKPNKP SN NSG  R QK ST QKDNHEK QRK++KPTIPKR+ QD FKCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG+NRHW NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A6J1I7W1 probable mediator of RNA polymerase II transcription subunit 26b6.7e-20985.15Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   D ETGFKSD AGDG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD LQATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HL R LI EWKEMVD+WVKATAAV G+EVTPDSK+  A+ +EEDD+  E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLA------KENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVK
        TSNG+QNP RC QQTTREVNV+A      K+NK+QMKEQVVKPNKP SN NSGL RPQK ST QKDNHEK QRK++KPTIPKR+ QD FKCSDEVAVQVK
Subjt:  TSNGNQNPTRCNQQTTREVNVLA------KENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVK

Query:  LEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        LEATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG+NRHW NGRR
Subjt:  LEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a9.4e-6741.65Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG
         L  EWK +VD W+     + G E TP+S N S         +EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V++++  +  S+ 
Subjt:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG

Query:  NQNPTRCNQQTTREVNVLAK---ENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEA
         + P     + T + NV+ +   + +T+ +E  V+P K S+       R  K S EQ  +    QRK    T  KR     QQD  K  D      K E 
Subjt:  NQNPTRCNQQTTREVNVLAK---ENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEA

Query:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH
         KRKLQESY Q ENAK+QRTIQV+E   +PKQ    + P LK     R+
Subjt:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c9.2e-2227.39Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD      V  A  G ++             G   E      +E
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE

Query:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRH
            ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  + S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R 
Subjt:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRH

Query:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        LA+ L+ +WKE VD WVK     Q  ++ P S      +  ++D   ++ L +    +   F   P                 P+N        +N+   
Subjt:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK
        +   + P     Q  RE                 KP++PS +                           + TIP+          D+   +V  +  +++
Subjt:  SNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK

Query:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW
        LQ++Y+QAENAKKQRTIQVM++HD+PK   G   P  + GG +   RHW
Subjt:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW

Q14241 Elongin-A5.1e-0433.72Show/hide
Query:  LFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFE
        L + L++L  + ++VD L  T +GK VN LRKH  + +   AR L+ +WK++V V   A    Q  E +   K    A+++E++ E
Subjt:  LFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFE

Q8CB77 Elongin-A3.9e-0432.56Show/hide
Query:  LFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFE
        L + L++L ++ ++VD L  T +GK VN  RKH  +++ + AR L+ +WK++V V   + A  Q  E     K    A++ E++ E
Subjt:  LFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFE

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b3.8e-9249.14Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N E+E +SVL +SLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHL

Query:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS
        A+ LI EWKE+VD WV  T  + GAE TP+S N S         +EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +   +R + R+  
Subjt:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS

Query:  NGNQNPTRCNQQTTREVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS
        N  +                 K   TQM+ Q    +  KPSS T+  G  RP K STEQ+  +E     K +KP I ++             QQ+  K  
Subjt:  NGNQNPTRCNQQTTREVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS

Query:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        D      K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   +    + G  NR+WANGR+
Subjt:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein3.6e-5345.19Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQ
         L  EWK +VD W+     + G E TP+S N S         +EEE  PSPP D    +  +P   ELSQ
Subjt:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQ

AT3G10820.2 Transcription elongation factor (TFIIS) family protein6.7e-6841.65Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG
         L  EWK +VD W+     + G E TP+S N S         +EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V++++  +  S+ 
Subjt:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG

Query:  NQNPTRCNQQTTREVNVLAK---ENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEA
         + P     + T + NV+ +   + +T+ +E  V+P K S+       R  K S EQ  +    QRK    T  KR     QQD  K  D      K E 
Subjt:  NQNPTRCNQQTTREVNVLAK---ENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEA

Query:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH
         KRKLQESY Q ENAK+QRTIQV+E   +PKQ    + P LK     R+
Subjt:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH

AT3G48060.1 BAH domain ;TFIIS helical bundle-like domain8.9e-0437.1Show/hide
Query:  DSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKA
        D  L   LR L+ + ++++ LQ   IGK+VN LR H +  I   AR L+  WK+ V+  + A
Subjt:  DSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKA

AT5G05140.1 Transcription elongation factor (TFIIS) family protein2.7e-9349.14Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N E+E +SVL +SLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHL

Query:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS
        A+ LI EWKE+VD WV  T  + GAE TP+S N S         +EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +   +R + R+  
Subjt:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS

Query:  NGNQNPTRCNQQTTREVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS
        N  +                 K   TQM+ Q    +  KPSS T+  G  RP K STEQ+  +E     K +KP I ++             QQ+  K  
Subjt:  NGNQNPTRCNQQTTREVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS

Query:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        D      K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   +    + G  NR+WANGR+
Subjt:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

AT5G09850.1 Transcription elongation factor (TFIIS) family protein6.5e-2327.39Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD      V  A  G ++             G   E      +E
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE

Query:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRH
            ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  + S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R 
Subjt:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRH

Query:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        LA+ L+ +WKE VD WVK     Q  ++ P S      +  ++D   ++ L +    +   F   P                 P+N        +N+   
Subjt:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK
        +   + P     Q  RE                 KP++PS +                           + TIP+          D+   +V  +  +++
Subjt:  SNGNQNPTRCNQQTTREVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK

Query:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW
        LQ++Y+QAENAKKQRTIQVM++HD+PK   G   P  + GG +   RHW
Subjt:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAAGTCTGGGTCGCTGGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGCATAATCGATTACGCAATCTTGGTGGCGGCTTCCGATTG
TCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCGGAGCAGTTGTTTTCTTGCCGATTGACTCGTTGTTTGGGTTGCGACCGAGTGGAGCTGGCGGTGGCCGGAGACA
TCGACGGCGACGACGGTGAAACTGGTTTCAAAAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGTAAGGTTTATAGCAGTAGAGATGAT
ATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTAACTGATGAAATTGAACAAGAATCTCAGATTGTTGGGGAGGTTCTGAGGAT
CAAAGAGATTCTTAATAATTTTGAAGAAGAGTCTGATTCAGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTTTCAGTTGATACTCTGCAGGCAACTGAGA
TTGGCAAAGCTGTTAATGGCCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGAAATGGTGGACGTGTGGGTAAAAGCT
ACAGCTGCTGTTCAAGGTGCCGAAGTCACACCAGATTCCAAAAACAAGTCTGCTGCAGTGAAAGAAGAAGATGATTTTGAAGAAGAAGAAGGGCTTCCCTCTCCTCCTTT
AGATGAAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGA
ATCGCAATAATGTGAGAAAAACATCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTCAATGTGCTTGCTAAGGAAAATAAGACTCAAATG
AAGGAACAAGTTGTGAAACCAAATAAGCCATCCTCAAATACAAATTCTGGGCTTTTGAGGCCACAGAAGCTAAGCACCGAGCAGAAGGACAATCACGAGAAGTTCCAGCG
CAAATTGGATAAACCTACAATCCCGAAGAGGAATCAGCAAGATAACTTCAAGTGCTCCGATGAGGTTGCAGTTCAAGTGAAACTAGAAGCCACAAAGAGGAAACTCCAAG
AGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTTATGGAATTACACGATCTTCCCAAGCAGGGACTCGGCCACAGAAATCCACACCTAAAATCT
GGAGGCTACAACCGGCATTGGGCAAATGGGCGGCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAAGTCTGGGTCGCTGGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGCATAATCGATTACGCAATCTTGGTGGCGGCTTCCGATTG
TCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCGGAGCAGTTGTTTTCTTGCCGATTGACTCGTTGTTTGGGTTGCGACCGAGTGGAGCTGGCGGTGGCCGGAGACA
TCGACGGCGACGACGGTGAAACTGGTTTCAAAAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGTAAGGTTTATAGCAGTAGAGATGAT
ATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTAACTGATGAAATTGAACAAGAATCTCAGATTGTTGGGGAGGTTCTGAGGAT
CAAAGAGATTCTTAATAATTTTGAAGAAGAGTCTGATTCAGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTTTCAGTTGATACTCTGCAGGCAACTGAGA
TTGGCAAAGCTGTTAATGGCCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGAAATGGTGGACGTGTGGGTAAAAGCT
ACAGCTGCTGTTCAAGGTGCCGAAGTCACACCAGATTCCAAAAACAAGTCTGCTGCAGTGAAAGAAGAAGATGATTTTGAAGAAGAAGAAGGGCTTCCCTCTCCTCCTTT
AGATGAAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGA
ATCGCAATAATGTGAGAAAAACATCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTCAATGTGCTTGCTAAGGAAAATAAGACTCAAATG
AAGGAACAAGTTGTGAAACCAAATAAGCCATCCTCAAATACAAATTCTGGGCTTTTGAGGCCACAGAAGCTAAGCACCGAGCAGAAGGACAATCACGAGAAGTTCCAGCG
CAAATTGGATAAACCTACAATCCCGAAGAGGAATCAGCAAGATAACTTCAAGTGCTCCGATGAGGTTGCAGTTCAAGTGAAACTAGAAGCCACAAAGAGGAAACTCCAAG
AGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTTATGGAATTACACGATCTTCCCAAGCAGGGACTCGGCCACAGAAATCCACACCTAAAATCT
GGAGGCTACAACCGGCATTGGGCAAATGGGCGGCGTTAG
Protein sequenceShow/hide protein sequence
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDD
IGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKA
TAAVQGAEVTPDSKNKSAAVKEEDDFEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTTREVNVLAKENKTQM
KEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKS
GGYNRHWANGRR