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HG10019890 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019890
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionferredoxin-thioredoxin reductase, variable chain
Genome locationChr04:26553589..26553972
RNA-Seq ExpressionHG10019890
SyntenyHG10019890
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034101.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa]7.3e-2265.09Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F  + ++ SFS SV SLS VVVNPF+ S RRGRRLFSEV+VRS+  TSSS T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL E
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

XP_004147092.1 ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus]6.1e-2164.15Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F    +K SFS SV SLS +VVNPF+ S RRGRRLFSEV VRS+  TSSS T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL +
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

XP_008445916.1 PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]7.3e-2265.09Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F  + ++ SFS SV SLS VVVNPF+ S RRGRRLFSEV+VRS+  TSSS T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL E
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

XP_023523040.1 ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita pepo subsp. pepo]2.8e-2165.42Show/hide
Query:  SCSSCMFYDNI-LKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLL
        +CS  M   ++ +K S+S SV SLS VV NPF+Y  RRGRR+ SEVTV+S+ R SSS TVVS AAT LS+EET E AATRIGAKV+VKVPLKVY + KL 
Subjt:  SCSSCMFYDNI-LKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLL

Query:  EENLEGM
        E NLEGM
Subjt:  EENLEGM

XP_038893043.1 ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]1.8e-2064.15Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F    +K S+S SV SLS VVVNPF+ S RRGRRLFSEV VRS+  TS S T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL E
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

TrEMBL top hitse value%identityAlignment
A0A0A0KV36 FeThRed_A domain-containing protein3.0e-2164.15Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F    +K SFS SV SLS +VVNPF+ S RRGRRLFSEV VRS+  TSSS T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL +
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain3.5e-2265.09Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F  + ++ SFS SV SLS VVVNPF+ S RRGRRLFSEV+VRS+  TSSS T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL E
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

A0A5D3D039 Sphingoid long-chain bases kinase 13.5e-2265.09Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +F  + ++ SFS SV SLS VVVNPF+ S RRGRRLFSEV+VRS+  TSSS T VS A T LS+EET+E AA RIGA+V+VKVPLKVY + KL E
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

A0A6J1G052 ferredoxin-thioredoxin reductase, variable chain-like1.9e-2069.47Show/hide
Query:  LKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLEENLEGM
        +K S+S SV SLS VV NPF+   RRGRR+ SEVTV+S+ R SSS TVVS AAT LS+EET E AATRIGAKV+VKVPLKVY + KL E NLEGM
Subjt:  LKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLEENLEGM

A0A6J1HQV7 ferredoxin-thioredoxin reductase, variable chain-like2.1e-1963.21Show/hide
Query:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE
        +CS  +     +K S+S SV SLS VV NPF+    RGRR+ SEVTV+S+ R SSS TVVS AAT LS+EET E AATRIGAKV+VKVPLKVY + KL E
Subjt:  SCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNE-AATRIGAKVKVKVPLKVYPIPKLLE

Query:  ENLEGM
         NLEGM
Subjt:  ENLEGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 25.6e-0435.19Show/hide
Query:  LSFSLSVYSLSLVVVNPFDYSTRRGR--------RLFSEVTVRSNFRTSSSGTVVSMA----ATPLSKEETNEAATRIGAKVKVKVPLKVYPIPKLLEEN
        LS   S+ S S  +  P   ST  GR        R   + T+R +    S+ +V + A    +T L  EE  +A  +IGA+V+V VPLKVY + ++ E  
Subjt:  LSFSLSVYSLSLVVVNPFDYSTRRGR--------RLFSEVTVRSNFRTSSSGTVVSMA----ATPLSKEETNEAATRIGAKVKVKVPLKVYPIPKLLEEN

Query:  LEGMGVEG
        +E MG+EG
Subjt:  LEGMGVEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTTGCTCGTCTTGCATGTTCTATGACAACATTCTCAAATTGTCCTTTTCCTTGTCTGTTTATTCTCTATCATTAGTTGTTGTTAATCCTTTCGACTACTCTAC
TAGAAGAGGGAGAAGATTGTTTAGCGAGGTTACAGTTAGATCAAATTTCAGAACTTCGTCTTCAGGTACTGTCGTTTCGATGGCGGCGACACCATTGTCGAAGGAAGAGA
CTAATGAAGCAGCTACTAGAATTGGCGCCAAAGTTAAGGTTAAGGTGCCTTTGAAGGTGTATCCTATACCGAAGTTACTGGAGGAAAATCTTGAGGGGATGGGTGTTGAA
GGACTATGTACAAGTTTGAAAAGGGAAGCATGTATCTGCCAATCTTCCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTTGCTCGTCTTGCATGTTCTATGACAACATTCTCAAATTGTCCTTTTCCTTGTCTGTTTATTCTCTATCATTAGTTGTTGTTAATCCTTTCGACTACTCTAC
TAGAAGAGGGAGAAGATTGTTTAGCGAGGTTACAGTTAGATCAAATTTCAGAACTTCGTCTTCAGGTACTGTCGTTTCGATGGCGGCGACACCATTGTCGAAGGAAGAGA
CTAATGAAGCAGCTACTAGAATTGGCGCCAAAGTTAAGGTTAAGGTGCCTTTGAAGGTGTATCCTATACCGAAGTTACTGGAGGAAAATCTTGAGGGGATGGGTGTTGAA
GGACTATGTACAAGTTTGAAAAGGGAAGCATGTATCTGCCAATCTTCCATATAA
Protein sequenceShow/hide protein sequence
MGSCSSCMFYDNILKLSFSLSVYSLSLVVVNPFDYSTRRGRRLFSEVTVRSNFRTSSSGTVVSMAATPLSKEETNEAATRIGAKVKVKVPLKVYPIPKLLEENLEGMGVE
GLCTSLKREACICQSSI