; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019963 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019963
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description11 kDa late embryogenesis abundant protein-like
Genome locationChr04:27368583..27370831
RNA-Seq ExpressionHG10019963
SyntenyHG10019963
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25405.1 18 kDa seed maturation protein [Cucumis melo var. makuwa]9.3e-3185.11Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTG
        MQSGRNAAE+ KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP EK+M RE+K+ R+QEA+LDKQQAR EHAAE+QAG+GPGTR GLGTGTG
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTG

XP_022940345.1 11 kDa late embryogenesis abundant protein-like [Cucurbita moschata]2.5e-3180.37Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGL--GTGTGTGTH
        MQSG+NAAES KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP+EKDMA ERKE R+  AELDKQQARAEHA E+QA S  G   GL  GTGTGTGT 
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGL--GTGTGTGTH

Query:  TYDPTVG
         YDPTVG
Subjt:  TYDPTVG

XP_022971427.1 11 kDa late embryogenesis abundant protein-like [Cucurbita maxima]7.9e-3080Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY
        MQSG+NAAES KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP+EKDMA ERKE R+  AELDKQQARAEHAAE+QA S  G   GL   TGTGT  Y
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY

Query:  DPTVG
        DPTVG
Subjt:  DPTVG

XP_031737964.1 11 kDa late embryogenesis abundant protein-like [Cucumis sativus]4.8e-3585.71Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY
        MQSGRNAAE+ KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP EKDMARERK+ R+QEAELDKQQAR EHAAE+Q G+GPGTR    TG GTGTHTY
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY

Query:  DPTVG
        DPTVG
Subjt:  DPTVG

XP_038905932.1 11 kDa late embryogenesis abundant protein-like [Benincasa hispida]3.2e-3989.81Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGL--GTGTGTGTH
        MQSGRNAAE+AKESAANVGASAKAGMEK KA+AQEKVDKMRAHDPIEKDMARERKE R+QEAELDKQQARAEHAA++Q G+GPGTRVGL  GTGTGTGTH
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGL--GTGTGTGTH

Query:  TYDPTVGR
        TYDPTVGR
Subjt:  TYDPTVGR

TrEMBL top hitse value%identityAlignment
A0A0A0LBV1 Uncharacterized protein2.3e-3585.71Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY
        MQSGRNAAE+ KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP EKDMARERK+ R+QEAELDKQQAR EHAAE+Q G+GPGTR    TG GTGTHTY
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY

Query:  DPTVG
        DPTVG
Subjt:  DPTVG

A0A5D3DPJ3 18 kDa seed maturation protein4.5e-3185.11Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTG
        MQSGRNAAE+ KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP EK+M RE+K+ R+QEA+LDKQQAR EHAAE+QAG+GPGTR GLGTGTG
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTG

A0A6J1DVT9 11 kDa late embryogenesis abundant protein-like2.3e-2776.19Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY
        MQSGRNAAESAKESAANVGA+A+AGM+KTKATAQEKVDKMRAHDP+EKDMA  RKE R+ EAE++KQQARA HAAE+QAG+  GT  GL TGTGTG    
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY

Query:  DPTVG
         PT G
Subjt:  DPTVG

A0A6J1FQA5 11 kDa late embryogenesis abundant protein-like1.2e-3180.37Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGL--GTGTGTGTH
        MQSG+NAAES KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP+EKDMA ERKE R+  AELDKQQARAEHA E+QA S  G   GL  GTGTGTGT 
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGL--GTGTGTGTH

Query:  TYDPTVG
         YDPTVG
Subjt:  TYDPTVG

A0A6J1I1X4 11 kDa late embryogenesis abundant protein-like3.8e-3080Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY
        MQSG+NAAES KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP+EKDMA ERKE R+  AELDKQQARAEHAAE+QA S  G   GL   TGTGT  Y
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY

Query:  DPTVG
        DPTVG
Subjt:  DPTVG

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1134.2e-1052.81Show/hide
Query:  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTYD
        +S  +  ASAKAGMEK KA+ QEKVD+M+  DP EK+MARERKE R ++AEL KQ+AR  +A     G G     G+G GTG  T  Y+
Subjt:  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTYD

P46515 11 kDa late embryogenesis abundant protein1.5e-2061.17Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY
        MQSG+NAA SAKE+AANV ASAKAGMEKTKA+ QEK +KM AHDP++K+MARE+KE R  EAE +KQ A+  +AA+KQ            TG GTGTH+Y
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTY

Query:  DPT
          T
Subjt:  DPT

Q00747 Protein LE255.0e-1149Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTG-TGTHT
        MQ+G++AA           ++AKAGMEKTKA  QEK ++M   DP++K+MA E+KE RV  AE+ K+ A+A+HAAEKQ  +  GT     TG G TG HT
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTG-TGTHT

Q01417 18 kDa seed maturation protein6.5e-1955.66Show/hide
Query:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLG---TGTGTGT
        MQ G+ A ES KE+A N+GASAKAGMEKTKAT QEK ++M A DP++K++A ++KE ++ +AELDKQ AR  + A KQ+ +  G  +G G   TGTGTGT
Subjt:  MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLG---TGTGTGT

Query:  HTYDPT
         TY  T
Subjt:  HTYDPT

Q9FG31 Late embryogenesis abundant protein 461.1e-1348.48Show/hide
Query:  ESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGT---------GTGTH
        +S KE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP++K MA + KE ++ +AE+ K++ R  +AA K+A +G GT +GLGT T         GTGTH
Subjt:  ESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGT---------GTGTH

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-57.6e-1548.48Show/hide
Query:  ESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGT---------GTGTH
        +S KE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP++K MA + KE ++ +AE+ K++ R  +AA K+A +G GT +GLGT T         GTGTH
Subjt:  ESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGT---------GTGTH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGGGAAGGAACGCGGCGGAGTCGGCGAAGGAATCGGCCGCAAATGTGGGGGCCTCTGCCAAAGCTGGCATGGAAAAGACCAAAGCCACTGCTCAAGAAAAGGT
GGACAAAATGCGGGCCCACGATCCAATTGAGAAAGACATGGCGAGAGAAAGGAAAGAGGGGAGGGTTCAGGAGGCTGAGCTGGACAAGCAGCAGGCGCGTGCAGAACACG
CAGCAGAGAAGCAGGCCGGTTCAGGACCCGGGACCCGTGTCGGGTTGGGAACCGGGACTGGAACTGGAACCCACACCTATGACCCGACCGTGGGTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGGGAAGGAACGCGGCGGAGTCGGCGAAGGAATCGGCCGCAAATGTGGGGGCCTCTGCCAAAGCTGGCATGGAAAAGACCAAAGCCACTGCTCAAGAAAAGGT
GGACAAAATGCGGGCCCACGATCCAATTGAGAAAGACATGGCGAGAGAAAGGAAAGAGGGGAGGGTTCAGGAGGCTGAGCTGGACAAGCAGCAGGCGCGTGCAGAACACG
CAGCAGAGAAGCAGGCCGGTTCAGGACCCGGGACCCGTGTCGGGTTGGGAACCGGGACTGGAACTGGAACCCACACCTATGACCCGACCGTGGGTAGATAA
Protein sequenceShow/hide protein sequence
MQSGRNAAESAKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPIEKDMARERKEGRVQEAELDKQQARAEHAAEKQAGSGPGTRVGLGTGTGTGTHTYDPTVGR