; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019995 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019995
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein
Genome locationChr04:27709057..27711992
RNA-Seq ExpressionHG10019995
SyntenyHG10019995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043777.1 F-box protein [Cucumis melo var. makuwa]1.9e-7054.11Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV
        MDLPDDV+LEI  R  L++A                                DGFLLQS  SK     LSFVSP  +N+ PPL+LSL+FLPG + QI+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS
         PNGLLLCE++H I H K+  YTI KLST+QWKGLPIP+ RYFT NIA+Y+L SNPLHFKILRLS DKIPSKRPLP  YTICE+FDS +WRWK LDD+  
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS

Query:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL
          C  +  V S    VFA+G AHWK  D  SI+AFDFYSETWSKI +P+   NDK          W+ +LVEYEG    + +  KPT  T+L
Subjt:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL

TYK25356.1 F-box protein [Cucumis melo var. makuwa]1.9e-7054.11Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV
        MDLPDDV+LEI  R  L++A                                DGFLLQS  SK     LSFVSP  +N+ PPL+LSL+FLPG + QI+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS
         PNGLLLCE++H I H K+  YTI KLST+QWKGLPIP+ RYFT NIA+Y+L SNPLHFKILRLS DKIPSKRPLP  YTICE+FDS +WRWK LDD+  
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS

Query:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL
          C  +  V S    VFA+G AHWK  D  SI+AFDFYSETWSKI +P+   NDK          W+ +LVEYEG    + +  KPT  T+L
Subjt:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL

XP_004136723.1 F-box protein At5g49610 [Cucumis sativus]1.4e-7658.21Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQSNS-FPPLDLSLSFLPGRDVQIQAV
        MD P+DVVLEI SR  L++A K++ LSKF++  SY+SYYK L+A+NQ     DGFLLQS   K     +SFVSP  +S   PL+LSLSFLPG + +I+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQSNS-FPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDD-MK
         PNGLLLCES+H I H K+  YTI KL T+QWKGLPIP+ RYFTKNIA+++L SNPLHFKILRLS DKIPSKRPLP SYTI E+FDS++WRWKLLDD + 
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDD-MK

Query:  SCSGS---VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDM----KNNDKIT---------WNTQLVEYEG
           G+   V S+   VFA G AHWK     +I+AFDFYS+TWSKI +P+     +NN ++          W T+LVEYEG
Subjt:  SCSGS---VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDM----KNNDKIT---------WNTQLVEYEG

XP_008443600.1 PREDICTED: F-box protein At5g49610-like [Cucumis melo]1.8e-8459.25Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV
        MDLPDDV+LEI  R  L++A K++ LSKF++K SYS  YK L+++N  +P LDGFLLQS  SK     LSFVSP  +N+ PPL+LSL+FLPG + QI+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS
         PNGLLLCE++H I H K+  YTI KLST+QWKGLPIP+ RYFT NIA+Y+L SNPLHFKILRLS DKIPSKRPLP  YTICE+FDS +WRWK LDD+  
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS

Query:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL
          C  +  V S    VFA+G AHWK  D  SI+AFDFYSETWSKI +P+   NDK          W+ +LVEYEG    + +  KPT  T+L
Subjt:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL

XP_022983376.1 F-box protein At5g49610-like [Cucurbita maxima]2.2e-6649.47Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQS-----SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQA
        M+LPDDV++EI SR+P     K+RALSK H++ +Y+SY+K L A +Q  P L GFLLQS     +G +  LSF +PQ NS PPL+LSLSFLPG+  Q+ A
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQS-----SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQA

Query:  VTPNGLLLCESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDM--
        V PNGL+L ++RH   Y+++ YTICKL TKQW+ +PIP+ R+FT NIA+Y+  S+PLHF+I+RL  D   SKR  P  YT+CE+FDS +WRWK L+D+  
Subjt:  VTPNGLLLCESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDM--

Query:  KSCSGSVVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDK---------ITWNTQLVEYEGFNRDIGKGCKP
         +    V     AV   G AHWK  D  SI AFDF SETWS I  P+    ++          +W+T+LVEY+G    I + C+P
Subjt:  KSCSGSVVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDK---------ITWNTQLVEYEGFNRDIGKGCKP

TrEMBL top hitse value%identityAlignment
A0A0A0LBP1 FBA_3 domain-containing protein6.7e-7758.21Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQSNS-FPPLDLSLSFLPGRDVQIQAV
        MD P+DVVLEI SR  L++A K++ LSKF++  SY+SYYK L+A+NQ     DGFLLQS   K     +SFVSP  +S   PL+LSLSFLPG + +I+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQSNS-FPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDD-MK
         PNGLLLCES+H I H K+  YTI KL T+QWKGLPIP+ RYFTKNIA+++L SNPLHFKILRLS DKIPSKRPLP SYTI E+FDS++WRWKLLDD + 
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDD-MK

Query:  SCSGS---VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDM----KNNDKIT---------WNTQLVEYEG
           G+   V S+   VFA G AHWK     +I+AFDFYS+TWSKI +P+     +NN ++          W T+LVEYEG
Subjt:  SCSGS---VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDM----KNNDKIT---------WNTQLVEYEG

A0A1S3B7Y4 F-box protein At5g49610-like8.8e-8559.25Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV
        MDLPDDV+LEI  R  L++A K++ LSKF++K SYS  YK L+++N  +P LDGFLLQS  SK     LSFVSP  +N+ PPL+LSL+FLPG + QI+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS
         PNGLLLCE++H I H K+  YTI KLST+QWKGLPIP+ RYFT NIA+Y+L SNPLHFKILRLS DKIPSKRPLP  YTICE+FDS +WRWK LDD+  
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS

Query:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL
          C  +  V S    VFA+G AHWK  D  SI+AFDFYSETWSKI +P+   NDK          W+ +LVEYEG    + +  KPT  T+L
Subjt:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL

A0A5A7TPP2 F-box protein9.4e-7154.11Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV
        MDLPDDV+LEI  R  L++A                                DGFLLQS  SK     LSFVSP  +N+ PPL+LSL+FLPG + QI+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS
         PNGLLLCE++H I H K+  YTI KLST+QWKGLPIP+ RYFT NIA+Y+L SNPLHFKILRLS DKIPSKRPLP  YTICE+FDS +WRWK LDD+  
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS

Query:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL
          C  +  V S    VFA+G AHWK  D  SI+AFDFYSETWSKI +P+   NDK          W+ +LVEYEG    + +  KPT  T+L
Subjt:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL

A0A5D3DNY0 F-box protein9.4e-7154.11Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV
        MDLPDDV+LEI  R  L++A                                DGFLLQS  SK     LSFVSP  +N+ PPL+LSL+FLPG + QI+AV
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRR---LSFVSPQ-SNSFPPLDLSLSFLPGRDVQIQAV

Query:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS
         PNGLLLCE++H I H K+  YTI KLST+QWKGLPIP+ RYFT NIA+Y+L SNPLHFKILRLS DKIPSKRPLP  YTICE+FDS +WRWK LDD+  
Subjt:  TPNGLLLCESRHPI-HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKS

Query:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL
          C  +  V S    VFA+G AHWK  D  SI+AFDFYSETWSKI +P+   NDK          W+ +LVEYEG    + +  KPT  T+L
Subjt:  --CSGS--VVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKIT--------WNTQLVEYEGFNRDIGKGCKPTFGTDL

A0A6J1J214 F-box protein At5g49610-like1.1e-6649.47Show/hide
Query:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQS-----SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQA
        M+LPDDV++EI SR+P     K+RALSK H++ +Y+SY+K L A +Q  P L GFLLQS     +G +  LSF +PQ NS PPL+LSLSFLPG+  Q+ A
Subjt:  MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQS-----SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQA

Query:  VTPNGLLLCESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDM--
        V PNGL+L ++RH   Y+++ YTICKL TKQW+ +PIP+ R+FT NIA+Y+  S+PLHF+I+RL  D   SKR  P  YT+CE+FDS +WRWK L+D+  
Subjt:  VTPNGLLLCESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDM--

Query:  KSCSGSVVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDK---------ITWNTQLVEYEGFNRDIGKGCKP
         +    V     AV   G AHWK  D  SI AFDF SETWS I  P+    ++          +W+T+LVEY+G    I + C+P
Subjt:  KSCSGSVVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDK---------ITWNTQLVEYEGFNRDIGKGCKP

SwissProt top hitse value%identityAlignment
Q6NLE0 F-box protein At5g417201.3e-0831.9Show/hide
Query:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYY--KDLVAQNQLRPFLDGFLLQSSGSKRRLSFVSPQSNSFPPLDLSLSFLPGR-DVQIQAV-TPNGL
        DV+LEI S  P  +  K R LSK  +K SY   +  + L   N    ++  F  + +   R  S      +      ++L+FLP   +V I+A  T +G+
Subjt:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYY--KDLVAQNQLRPFLDGFLLQSSGSKRRLSFVSPQSNSFPPLDLSLSFLPGR-DVQIQAV-TPNGL

Query:  LLCESRHPIHYKQR----FYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLS
        LLC     + +K R     Y +CK +TKQ++ +P P+ R+ T    + ++SSNP  +KI+R+S
Subjt:  LLCESRHPIHYKQR----FYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLS

Arabidopsis top hitse value%identityAlignment
AT1G64290.1 F-box protein-related7.5e-2029.55Show/hide
Query:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRP-FLDGFLLQS---SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAV-TPNG
        D++ E  S +P  K  K R L+K  +K SY S++ +L   N LR   + G+ +Q     G + R SFV  +S+      +S+ FLP   ++I+A    +G
Subjt:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRP-FLDGFLLQS---SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAV-TPNG

Query:  LLLCESRHPIHYKQ--RFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKR----PLPHSYTICELFDSRTWRWKLLDDMK
        +LLC     + Y +  R Y + K +TKQ++ +P P ++ +  ++ + ++  NP  +KI RLS  +          L H   +CE+FDS ++ WK L++++
Subjt:  LLLCESRHPIHYKQ--RFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKR----PLPHSYTICELFDSRTWRWKLLDDMK

Query:  SCSGSVVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKITWNTQLVEYEG
              +  S  +   G  HW +    ++  F   +ETWS    P   N+D     + LV YEG
Subjt:  SCSGSVVSHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKITWNTQLVEYEG

AT1G64295.1 F-box associated ubiquitination effector family protein5.9e-1728.4Show/hide
Query:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQ--SSGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAV-TPNGLL
        D + E+ S +   +  KLR ++K  +K SY S++ +L         + G+ L+    G K   SF   +        +S+ FLP  +V+I+A    +G+L
Subjt:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQ--SSGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAV-TPNGLL

Query:  LC-ESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKSCSGSVV
        LC     PI      Y +CK +TKQ++ +P P++R   K++ + +    P  +KI RLS  K P       ++  CE+FDS ++ WK L +++      +
Subjt:  LC-ESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKSCSGSVV

Query:  SHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKITWNTQLVEYEG
          S  V A G  HW+  +  ++      +ETWS +  P+      +    +LV YEG
Subjt:  SHSPAVFAFGSAHWKMGDGVSIYAFDFYSETWSKIDVPDMKNNDKITWNTQLVEYEG

AT2G05360.1 BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT1G64295.1)8.6e-0829.41Show/hide
Query:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRP-FLDGFLLQS--SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAV-TPNGL
        D++ E+ S +P  K  K R L+K  +K SY S++ +L   N  R  ++ G+ L+S   G     SFV  +        +S+ FLP  + +I+A    +G+
Subjt:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRP-FLDGFLLQS--SGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAV-TPNGL

Query:  LLCESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHF
        LLC +   +  +   Y +CK +TKQ+  +P P++    K++ I +    P  F
Subjt:  LLCESRHPIHYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHF

AT5G41720.1 BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1)9.2e-1031.9Show/hide
Query:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYY--KDLVAQNQLRPFLDGFLLQSSGSKRRLSFVSPQSNSFPPLDLSLSFLPGR-DVQIQAV-TPNGL
        DV+LEI S  P  +  K R LSK  +K SY   +  + L   N    ++  F  + +   R  S      +      ++L+FLP   +V I+A  T +G+
Subjt:  DVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYY--KDLVAQNQLRPFLDGFLLQSSGSKRRLSFVSPQSNSFPPLDLSLSFLPGR-DVQIQAV-TPNGL

Query:  LLCESRHPIHYKQR----FYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLS
        LLC     + +K R     Y +CK +TKQ++ +P P+ R+ T    + ++SSNP  +KI+R+S
Subjt:  LLCESRHPIHYKQR----FYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTCCCGACGACGTCGTATTGGAGATTTCGAGCCGAGTTCCCCTCGATAAAGCTGAAAAACTACGAGCTCTCTCAAAATTTCACGACAAATTTAGTTATTCCTC
CTATTACAAAGACTTAGTTGCCCAAAATCAGCTCCGACCCTTCTTAGACGGTTTCCTCCTCCAAAGCTCTGGATCCAAACGTCGTTTATCCTTTGTTTCTCCACAATCCA
ATTCTTTCCCGCCGTTGGATTTGTCATTGAGCTTCCTCCCGGGTCGTGACGTTCAAATCCAAGCCGTTACTCCCAACGGTCTTCTTTTATGTGAATCCCGACATCCAATC
CATTACAAACAACGTTTTTACACAATTTGTAAACTTTCTACAAAGCAATGGAAAGGCCTTCCCATTCCAAGGATTCGTTACTTCACAAAAAACATTGCCATATACATTTT
AAGTTCCAACCCTCTCCACTTCAAAATCCTTCGTTTATCCCACGACAAAATCCCCTCGAAACGCCCTTTGCCGCATTCATACACCATATGCGAGCTCTTCGATTCTAGAA
CTTGGCGGTGGAAGCTACTCGATGACATGAAGAGTTGTTCGGGCTCCGTAGTATCTCATTCTCCCGCTGTTTTTGCTTTTGGATCGGCTCATTGGAAAATGGGAGATGGA
GTTTCTATCTATGCTTTCGATTTTTACTCAGAAACTTGGTCTAAAATTGATGTGCCAGACATGAAAAACAATGATAAAATTACATGGAATACTCAACTTGTAGAATATGA
GGGTTTCAATCGAGATATAGGGAAAGGTTGTAAACCTACCTTTGGCACAGATTTGGCCAAACACCTCCGCCTCGACAACGGTTCGCATCCTCACAGAATCCGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTCCCGACGACGTCGTATTGGAGATTTCGAGCCGAGTTCCCCTCGATAAAGCTGAAAAACTACGAGCTCTCTCAAAATTTCACGACAAATTTAGTTATTCCTC
CTATTACAAAGACTTAGTTGCCCAAAATCAGCTCCGACCCTTCTTAGACGGTTTCCTCCTCCAAAGCTCTGGATCCAAACGTCGTTTATCCTTTGTTTCTCCACAATCCA
ATTCTTTCCCGCCGTTGGATTTGTCATTGAGCTTCCTCCCGGGTCGTGACGTTCAAATCCAAGCCGTTACTCCCAACGGTCTTCTTTTATGTGAATCCCGACATCCAATC
CATTACAAACAACGTTTTTACACAATTTGTAAACTTTCTACAAAGCAATGGAAAGGCCTTCCCATTCCAAGGATTCGTTACTTCACAAAAAACATTGCCATATACATTTT
AAGTTCCAACCCTCTCCACTTCAAAATCCTTCGTTTATCCCACGACAAAATCCCCTCGAAACGCCCTTTGCCGCATTCATACACCATATGCGAGCTCTTCGATTCTAGAA
CTTGGCGGTGGAAGCTACTCGATGACATGAAGAGTTGTTCGGGCTCCGTAGTATCTCATTCTCCCGCTGTTTTTGCTTTTGGATCGGCTCATTGGAAAATGGGAGATGGA
GTTTCTATCTATGCTTTCGATTTTTACTCAGAAACTTGGTCTAAAATTGATGTGCCAGACATGAAAAACAATGATAAAATTACATGGAATACTCAACTTGTAGAATATGA
GGGTTTCAATCGAGATATAGGGAAAGGTTGTAAACCTACCTTTGGCACAGATTTGGCCAAACACCTCCGCCTCGACAACGGTTCGCATCCTCACAGAATCCGTTTCTGA
Protein sequenceShow/hide protein sequence
MDLPDDVVLEISSRVPLDKAEKLRALSKFHDKFSYSSYYKDLVAQNQLRPFLDGFLLQSSGSKRRLSFVSPQSNSFPPLDLSLSFLPGRDVQIQAVTPNGLLLCESRHPI
HYKQRFYTICKLSTKQWKGLPIPRIRYFTKNIAIYILSSNPLHFKILRLSHDKIPSKRPLPHSYTICELFDSRTWRWKLLDDMKSCSGSVVSHSPAVFAFGSAHWKMGDG
VSIYAFDFYSETWSKIDVPDMKNNDKITWNTQLVEYEGFNRDIGKGCKPTFGTDLAKHLRLDNGSHPHRIRF