CuGenDBv2

Gene ID	HG10020022
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Fra a 1-associated protein
Genome location	Chr04:28046609..28050828
RNA-Seq Expression	HG10020022
Synteny	HG10020022
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136529.1 fra a 1-associated protein [Cucumis sativus]

2.0e-87

85.79

Show/hide

Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRD+  +SDS A D  KFNNS+ PSSSD CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SNKE TEEDVTDQMVNRSFS GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPI-EDHEPVFFSNPKEPDSGHVDLSGLARDV
          SEHRP DFPGLRSDIDAIEQSLFGSMKGFF+AAEEIKNGFFGS RDPPLFNR+SSSS SMRRGIPI EDH+PVFF NPKEPDSGHVDLSGLARDV
Subjt:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPI-EDHEPVFFSNPKEPDSGHVDLSGLARDV

XP_008442953.1 PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo]

2.7e-92

88.66

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Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVW D+ G+ DSSA DGAKF+NS+ PSSSDRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSNKEFTEEDVTDQMVNRSF  GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        SEHRPFDFPGLRSDIDAIEQSLFGSMKGFF+AAEEIKNGFFGS RDPPLFNR+SSS  SMRRGIPIEDH+P FFSNPKEPDSGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

XP_022151462.1 uncharacterized protein LOC111019393 [Momordica charantia]

2.9e-78

80.93

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Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRDE GESD  AGD       S  SS DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDV DQ+VNRSFSSG+
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFF+AAEEIKNGFFG  RDP  F  E SSSPSMRRGIPIEDHE   FS P EPDSGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

XP_023539788.1 uncharacterized protein LOC111800367 [Cucurbita pepo subsp. pepo]

5.6e-74

77.95

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Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG
        MG VWR  +GE DS AGDG   NN S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFSSG
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF AAEEI+NGFFGSFRDPPLFNRE SSSPSMR+                EPDSGHVDLSGLARDV
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

XP_038905970.1 fra a 1-associated protein [Benincasa hispida]

2.3e-96

92.78

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Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRD+ GE DSSA D AK NNS+ PS SDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFS GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        SEHRPFDFPGLRSDIDAIEQSLFGSMKGFF+AAEEIKNGFFGS RDPPLFNRESSSSPSMRRGIPIEDHEP FFSN KEPDSGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGU7 Uncharacterized protein

9.6e-88

85.79

Show/hide

Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRD+  +SDS A D  KFNNS+ PSSSD CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SNKE TEEDVTDQMVNRSFS GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPI-EDHEPVFFSNPKEPDSGHVDLSGLARDV
          SEHRP DFPGLRSDIDAIEQSLFGSMKGFF+AAEEIKNGFFGS RDPPLFNR+SSSS SMRRGIPI EDH+PVFF NPKEPDSGHVDLSGLARDV
Subjt:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPI-EDHEPVFFSNPKEPDSGHVDLSGLARDV

A0A1S3B6X7 uncharacterized protein LOC103486704

1.3e-92

88.66

Show/hide

Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVW D+ G+ DSSA DGAKF+NS+ PSSSDRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSNKEFTEEDVTDQMVNRSF  GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        SEHRPFDFPGLRSDIDAIEQSLFGSMKGFF+AAEEIKNGFFGS RDPPLFNR+SSS  SMRRGIPIEDH+P FFSNPKEPDSGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

A0A6J1DDK9 uncharacterized protein LOC111019393

1.4e-78

80.93

Show/hide

Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRDE GESD  AGD       S  SS DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDV DQ+VNRSFSSG+
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFF+AAEEIKNGFFG  RDP  F  E SSSPSMRRGIPIEDHE   FS P EPDSGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

A0A6J1FHK7 uncharacterized protein LOC111445845

1.0e-73

77.44

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Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG
        MG VWR  +GE DS AGDG   NN S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFSSG
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF AAEEI+NGFFGSFRDPPLF+RE SSSPSMR+                EPDSGHVDLSGLARDV
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

A0A6J1KVN4 uncharacterized protein LOC111498606

7.9e-74

77.44

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Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG
        MG VWR  +GE DS AGDG   NN S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFSSG
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF AAEEI+NGFFGSFRDPP+FNRE SSSPSMR+                EPDSGHVDLSGLARDV
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

SwissProt top hits

e value

%identity

Alignment

W5X2N3 Fra a 1-associated protein

1.6e-52

55.78

Show/hide

Query:  MGWVWRDEN---GESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFS
        MGWVW+D++   G  + SA D       S     DRCSTRKVV++QCKTEEVEPGKF+RKCE+TEE+LRDC+GRP+EV+QSNKE+TE+DVTDQ++  S S
Subjt:  MGWVWRDEN---GESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFS

Query:  SGSSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNR-ESSSSPSMRRGIPIEDHEPV-FFSNPKEPDSGHVDLSGLARDV
         GS+++  F+FPGL+ DID IE +  G +  FF+AAE++KNGFF SF  P +F+   S+S PS RR IPI+    +  F       SG VDLSGLARDV
Subjt:  SGSSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNR-ESSSSPSMRRGIPIEDHEPV-FFSNPKEPDSGHVDLSGLARDV

Arabidopsis top hits

e value

%identity

Alignment

AT2G35900.1 unknown protein

2.7e-42

50.99

Show/hide

Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGW+W D++  S + A    K    S  ++++ CST  VV+SQCKTEEVEPGKFVRKC++TEEILR C G+P EV+QSN E TEEDVTDQMV RS     
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHR-PFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRR-GIPIEDHEPV-----FFSNPKEP-DSGHVDLSGLAR
         E + P +FPGLR D+DAIE+     MK FF AAEE+ +  F    D           PS RR GIPIE+H  V       + P  P  SG +DLSGLA+
Subjt:  SEHR-PFDFPGLRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRR-GIPIEDHEPV-----FFSNPKEP-DSGHVDLSGLAR

Query:  DV
        DV
Subjt:  DV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGATGGGTCTGGAGAGACGAGAACGGCGAATCGGATTCATCCGCGGGAGATGGCGCTAAGTTCAACAATTCCAGCCTTCCGTCCTCCAGCGATCGGTGTTCTACCAG
AAAAGTGGTGAAGTCGCAGTGCAAGACCGAGGAGGTTGAGCCCGGAAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTTAGAGACTGCATTGGAAGGCCAGTCG
AAGTGATACAGTCCAACAAGGAATTTACAGAAGAGGATGTAACGGATCAGATGGTCAATAGGTCATTCTCATCGGGATCGTCCGAACATCGACCATTTGATTTCCCTGGG
CTCCGTAGCGATATTGATGCCATTGAGCAGAGTCTCTTTGGCAGCATGAAGGGGTTCTTTCAAGCCGCTGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTCAGAGATCC
ACCCCTATTCAACAGAGAGTCTTCGTCCTCCCCGTCGATGAGACGAGGAATACCCATCGAAGATCATGAGCCAGTGTTCTTCTCTAATCCGAAAGAGCCCGATTCCGGTC
ACGTTGACCTATCTGGATTGGCCAGGGATGTCTAA

mRNA sequence

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Protein sequence

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MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGSSEHRPFDFPG
LRSDIDAIEQSLFGSMKGFFQAAEEIKNGFFGSFRDPPLFNRESSSSPSMRRGIPIEDHEPVFFSNPKEPDSGHVDLSGLARDV

HG10020022 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome