CuGenDBv2

Gene ID	HG10020028
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ubiquitin carboxyl-terminal hydrolase
Genome location	Chr04:28088171..28097345
RNA-Seq Expression	HG10020028
Synteny	HG10020028
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0016579 - protein deubiquitination (biological process) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0043795.1 ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis melo var. makuwa]

3.1e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFE+TSNYG RLFR E+ SQ VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

KAE8651117.1 hypothetical protein Csa_001014 [Cucumis sativus]

6.9e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFEATSNYG RLFR E+  Q VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

XP_004136526.3 ubiquitin carboxyl-terminal hydrolase 8 [Cucumis sativus]

6.9e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFEATSNYG RLFR E+  Q VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

XP_008442944.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis melo]

3.1e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFE+TSNYG RLFR E+ SQ VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

XP_038903820.1 ubiquitin carboxyl-terminal hydrolase 8-like [Benincasa hispida]

6.7e-94

81.36

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MDD+F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND EKVYFVPFRWWQETQND DQ VGVLYSVSS+EDADSGILLELRKEKVH EYNGAEEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG AMWLQALKRHNDFEATSNYG R FR E+T QDVFPLQIRILVS  TNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLDDSLVQRVKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGU4 Ubiquitin carboxyl-terminal hydrolase

3.3e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFEATSNYG RLFR E+  Q VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

A0A1S3B6W7 Ubiquitin carboxyl-terminal hydrolase

1.5e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFE+TSNYG RLFR E+ SQ VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

A0A5A7TQX4 Ubiquitin carboxyl-terminal hydrolase

1.5e-91

79.09

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MD++F NDDEFWDID GSRSRPPQRPRLLDDFDYDDND+EKVYFVPFRWW ETQND DQ VGVLYSVSSEED DSGILLELRKEKVHTEY G EEGFSGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG +MWLQALKRHNDFE+TSNYG RLFR E+ SQ VFPLQIRILVSWETNLLTVKINRK                    FHIWDFSGQTNKLFTNN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
        SNNFLD SLVQ VKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

A0A6J1EYY5 Ubiquitin carboxyl-terminal hydrolase

8.8e-84

73.18

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MDD+F NDD+FWD+D GSRSRPPQRPRLLDD+DYDDND EKVYFVPFRW QETQND DQ VGVLYSVSS+EDADSGILLELRK++V T+Y+G EE  SGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG A+WLQALKRH+D + TSNY  RLFR EET QDVFPLQIRILVSWETNLL VKINRK                    FHIWDFSGQTN+LF NN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
         NNFLDDS VQRVKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

A0A6J1L2W6 Ubiquitin carboxyl-terminal hydrolase

1.1e-83

72.73

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Query:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR
        MDD+F NDD+FWD+D GSRSRPPQRPRLLDD+DYDDND EKVYFVPFRW QETQND DQ VGVLYSVSS+ED DSGILLELRK++V+T+Y+G EE  SGR
Subjt:  MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGR

Query:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN
        EYALIG A+WLQALKRH+D + TSNY  RLFR EET QDVFPLQIRILVSWETNLL VKINRK                    FHIWDFSGQTN+LF NN
Subjt:  EYALIGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNN

Query:  SNNFLDDSLVQRVKEASISV
         NNFLDDS VQRVKE  + +
Subjt:  SNNFLDDSLVQRVKEASISV

SwissProt top hits

e value

%identity

Alignment

Q9C585 Ubiquitin carboxyl-terminal hydrolase 8

9.9e-16

32.51

Show/hide

Query:  PPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQ----NDGDQAVGVLYSVSSEED-----------ADSGILLELRKEKVHTEYNG--AEEGFSGREYAL
        P    + +D F    N  ++VYFVP RWW++ Q    ++  +   +LY+ S                +S IL +LR+E    + NG   E   SGR++AL
Subjt:  PPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQ----NDGDQAVGVLYSVSSEED-----------ADSGILLELRKEKVHTEYNG--AEEGFSGREYAL

Query:  IGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQ-DVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNNSNN
        +   MWLQALK ++D + T   GV+ F      + DV+P+Q+R+ V  ETN L VKI +K                      IWD SGQT   F ++ +N
Subjt:  IGGAMWLQALKRHNDFEATSNYGVRLFRTEETSQ-DVFPLQIRILVSWETNLLTVKINRK--------------------FHIWDFSGQTNKLFTNNSNN

Query:  FLD
          D
Subjt:  FLD

Arabidopsis top hits

e value

%identity

Alignment

AT5G22030.1 ubiquitin-specific protease 8

6.4e-10

27.05

Show/hide

Query:  PPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQ----NDGDQAVGVLYSVSSEED-----------ADSGILLELRKEKVHTEYNG--AEEGFSGREYAL
        P    + +D F    N  ++VYFVP RWW++ Q    ++  +   +LY+ S                +S IL +LR+E    + NG   E   SGR++AL
Subjt:  PPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQ----NDGDQAVGVLYSVSSEED-----------ADSGILLELRKEKVHTEYNG--AEEGFSGREYAL

Query:  IGGAMWLQALK--RHND-------FEAT--------------------SNYGVRLFRTEETSQ-DVFPLQIRILVSWETNLLTVKINRKF----------
        +   MWLQALK  R ND       F A+                    +  GV+ F      + DV+P+Q+R+ V  ETN L       F          
Subjt:  IGGAMWLQALK--RHND-------FEAT--------------------SNYGVRLFRTEETSQ-DVFPLQIRILVSWETNLLTVKINRKF----------

Query:  ----------------------HIWDFSGQTNKLFTNNSNNFLD
                               IWD SGQT   F ++ +N  D
Subjt:  ----------------------HIWDFSGQTNKLFTNNSNNFLD

AT5G22030.2 ubiquitin-specific protease 8

6.4e-10

27.05

Show/hide

Query:  PPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQ----NDGDQAVGVLYSVSSEED-----------ADSGILLELRKEKVHTEYNG--AEEGFSGREYAL
        P    + +D F    N  ++VYFVP RWW++ Q    ++  +   +LY+ S                +S IL +LR+E    + NG   E   SGR++AL
Subjt:  PPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQ----NDGDQAVGVLYSVSSEED-----------ADSGILLELRKEKVHTEYNG--AEEGFSGREYAL

Query:  IGGAMWLQALK--RHND-------FEAT--------------------SNYGVRLFRTEETSQ-DVFPLQIRILVSWETNLLTVKINRKF----------
        +   MWLQALK  R ND       F A+                    +  GV+ F      + DV+P+Q+R+ V  ETN L       F          
Subjt:  IGGAMWLQALK--RHND-------FEAT--------------------SNYGVRLFRTEETSQ-DVFPLQIRILVSWETNLLTVKINRKF----------

Query:  ----------------------HIWDFSGQTNKLFTNNSNNFLD
                               IWD SGQT   F ++ +N  D
Subjt:  ----------------------HIWDFSGQTNKLFTNNSNNFLD

Sequences

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CDS sequence

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ATGGACGATATCTTCTCCAATGACGATGAGTTTTGGGACATCGATGGCGGTTCCCGCTCCCGACCCCCCCAGCGCCCCCGCCTGCTTGATGACTTTGATTATGACGATAA
TGATTCCGAGAAGGTTTACTTTGTTCCCTTCAGGTGGTGGCAGGAAACTCAAAATGATGGTGATCAAGCAGTAGGTGTTTTATATAGTGTGTCATCAGAGGAGGATGCTG
ATTCAGGAATTCTGTTGGAGCTCAGGAAAGAAAAAGTCCACACAGAATATAATGGTGCAGAAGAGGGGTTTTCCGGTCGTGAATACGCCCTGATTGGAGGAGCCATGTGG
TTGCAGGCCCTAAAGCGGCATAATGACTTTGAAGCAACATCGAATTATGGTGTCCGGCTTTTCAGAACTGAAGAGACATCGCAGGATGTTTTTCCTTTGCAAATTAGGAT
CTTGGTATCATGGGAGACAAATTTGTTAACTGTGAAGATAAACCGAAAGTTTCACATTTGGGACTTCTCAGGCCAAACAAATAAACTTTTCACAAATAACTCGAACAATT
TTCTTGATGATTCTCTTGTTCAACGAGTCAAAGAGGCAAGTATATCTGTATCTGAGCAATAG

mRNA sequence

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Protein sequence

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MDDIFSNDDEFWDIDGGSRSRPPQRPRLLDDFDYDDNDSEKVYFVPFRWWQETQNDGDQAVGVLYSVSSEEDADSGILLELRKEKVHTEYNGAEEGFSGREYALIGGAMW
LQALKRHNDFEATSNYGVRLFRTEETSQDVFPLQIRILVSWETNLLTVKINRKFHIWDFSGQTNKLFTNNSNNFLDDSLVQRVKEASISVSEQ

HG10020028 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome