; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020031 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020031
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionML domain-containing protein
Genome locationChr04:28131679..28134461
RNA-Seq ExpressionHG10020031
SyntenyHG10020031
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59365.2 hypothetical protein Csa_002562 [Cucumis sativus]1.1e-7075Show/hide
Query:  LEKEHFHGTHFSDEAHFPNSSLVVFCSTVLLRHSSPTLRMEFFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKM
        L+KEHFHGTHFSDEA FP SSL+ F +                    ++  F+++  +ETAKYDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKM
Subjt:  LEKEHFHGTHFSDEAHFPNSSLVVFCSTVLLRHSSPTLRMEFFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKM

Query:  VVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS
        VVDISYFGWHIYSDSHDICVETSCPY  GDFALPPLRTPLAFFLPGSYHMQITIVDGDDN+L CFGFDYELVIASLFGDS
Subjt:  VVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS

XP_004136524.1 MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus]4.3e-6293.5Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETAKYDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY  GDFALPPLRTPLAFFLPGSYHMQITIVDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+L CFGFDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

XP_022151451.1 uncharacterized protein LOC111019382 [Momordica charantia]2.5e-6294.31Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETA YDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY+FGDFAL PLRTPLAFF PGSYHMQI IVDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+L CFGFDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

XP_023522645.1 uncharacterized protein LOC111786644 [Cucurbita pepo subsp. pepo]1.2e-6787.94Show/hide
Query:  MEFFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTP
        M F VD HIID++S TDADETAKYDIMVKGV+ISPSPIVRG P NMTFNLIIGKPIIAGKMVVDI+YFGWH+Y DSHDICVETSCPY+FGDFAL PL+TP
Subjt:  MEFFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTP

Query:  LAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS
        LAFFLPGSYHMQIT+VDGDDN+LACFGFDYELVIASLFGDS
Subjt:  LAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS

XP_038905833.1 uncharacterized protein LOC120091785 [Benincasa hispida]3.3e-6293.5Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETAKYD+ VKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYS+SHDICVETSCPY+FGDFALPP RTPLAFFLPGSYHMQITIVDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+L CF FDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

TrEMBL top hitse value%identityAlignment
A0A0A0LBM1 ML domain-containing protein5.8e-7376.67Show/hide
Query:  LEKEHFHGTHFSDEAHFPNSSLVVFCSTVLLRHSSPTLRMEFFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKM
        L+KEHFHGTHFSDEA FP SSLVV  ST+          +    + ++ +       DETAKYDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKM
Subjt:  LEKEHFHGTHFSDEAHFPNSSLVVFCSTVLLRHSSPTLRMEFFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKM

Query:  VVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS
        VVDISYFGWHIYSDSHDICVETSCPY  GDFALPPLRTPLAFFLPGSYHMQITIVDGDDN+L CFGFDYELVIASLFGDS
Subjt:  VVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS

A0A1S3B7M8 uncharacterized protein LOC1034866932.7e-6293.5Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETA+YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCPY  GDFALPPLRTPLAFFLPGSYHMQITIVDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+L CFGFDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

A0A5D3DP69 Putative phosphatidylglycerol/phosphatidylinositol transfer protein2.7e-6293.5Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETA+YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCPY  GDFALPPLRTPLAFFLPGSYHMQITIVDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+L CFGFDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

A0A6J1DDJ6 uncharacterized protein LOC1110193821.2e-6294.31Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETA YDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY+FGDFAL PLRTPLAFF PGSYHMQI IVDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+L CFGFDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

A0A6J1FAL9 uncharacterized protein LOC1114423323.0e-6191.06Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        DETAKYDIMVKGV+ISPSPIVRG P NMTFNLIIGKPI+AGKMVVDISYFGWH+Y DSHDICVETSCPY+FGDFAL PL+TPLAFFLPGSYHMQIT+VDG
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGDS
        DDN+LACFGFDYELVIASLFGDS
Subjt:  DDNQLACFGFDYELVIASLFGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein2.6e-2535.51Show/hide
Query:  FFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLA
        F + + I+    V   D   +Y++ V+GV+I+P PI RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP   GDF +   +    
Subjt:  FFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLA

Query:  FFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGD
        +  PGSY +++ ++DG   +L C  F +++   S   D
Subjt:  FFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGD

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein4.2e-2333.33Show/hide
Query:  FFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDF------ALPP
        F + + I+    V   D   +Y++ V+GV+I+P PI RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP   GDF       LP 
Subjt:  FFVDAHIIDVFSVTDADETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDF------ALPP

Query:  LRTP------------LAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGD
           P              F + GSY +++ ++DG   +L C  F +++   S   D
Subjt:  LRTP------------LAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGD

AT3G44100.1 MD-2-related lipid recognition domain-containing protein6.4e-1633.33Show/hide
Query:  IMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLAC
        + V GV+ISP P+V G           G+ I  GK+V+ + Y G  +++++HD+C ET+CP   G F L   +T  +   PG+Y +++TI D +  +L C
Subjt:  IMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLAC

Query:  FGFDYELVIAS
          F +++ + S
Subjt:  FGFDYELVIAS

AT5G06480.1 Immunoglobulin E-set superfamily protein1.5e-2537.7Show/hide
Query:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG
        +E A+Y++ VK V+ISP+PI  G P   T +   G+ I  GK+V+++SYFGWH++S++HD+C ETSCP   GDF +   +    +  PGSY +++ ++D 
Subjt:  DETAKYDIMVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDG

Query:  DDNQLACFGFDYELVIASLFGD
           +L C  F +++ + +   D
Subjt:  DDNQLACFGFDYELVIASLFGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCATATCTTTCAGTTTCTCCCATTCTACTCCACCGAACCCCCGTCTTTTTCGCAACCCCAGAGCTTCATTATTAGAAATTGTCAAGTTTTTCTTCAAATCTGT
TCTTACAGAGCTCGAAAAAGAGCATTTCCATGGAACCCATTTTTCAGATGAAGCTCATTTTCCCAATTCTTCTTTGGTTGTGTTTTGTTCCACAGTTCTCCTTCGCCACT
CGAGTCCAACTCTGCGAATGGAATTTTTTGTTGATGCACATATAATTGACGTTTTTTCTGTAACTGATGCAGATGAGACAGCCAAGTATGATATCATGGTGAAAGGAGTA
GAGATATCTCCCAGCCCCATAGTTAGGGGCCATCCAACAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTT
CGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACACGTTTGGTGATTTTGCACTCCCTCCATTGCGAACTCCTCTGGCATTCTTTT
TACCTGGTTCATATCATATGCAGATAACCATTGTTGATGGAGATGATAATCAACTTGCATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCATTATTTGGAGATAGC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATCATATCTTTCAGTTTCTCCCATTCTACTCCACCGAACCCCCGTCTTTTTCGCAACCCCAGAGCTTCATTATTAGAAATTGTCAAGTTTTTCTTCAAATCTGT
TCTTACAGAGCTCGAAAAAGAGCATTTCCATGGAACCCATTTTTCAGATGAAGCTCATTTTCCCAATTCTTCTTTGGTTGTGTTTTGTTCCACAGTTCTCCTTCGCCACT
CGAGTCCAACTCTGCGAATGGAATTTTTTGTTGATGCACATATAATTGACGTTTTTTCTGTAACTGATGCAGATGAGACAGCCAAGTATGATATCATGGTGAAAGGAGTA
GAGATATCTCCCAGCCCCATAGTTAGGGGCCATCCAACAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTT
CGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACACGTTTGGTGATTTTGCACTCCCTCCATTGCGAACTCCTCTGGCATTCTTTT
TACCTGGTTCATATCATATGCAGATAACCATTGTTGATGGAGATGATAATCAACTTGCATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCATTATTTGGAGATAGC
TAA
Protein sequenceShow/hide protein sequence
MAIISFSFSHSTPPNPRLFRNPRASLLEIVKFFFKSVLTELEKEHFHGTHFSDEAHFPNSSLVVFCSTVLLRHSSPTLRMEFFVDAHIIDVFSVTDADETAKYDIMVKGV
EISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYTFGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNQLACFGFDYELVIASLFGDS