; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020054 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020054
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein YLS9
Genome locationChr04:28401190..28401936
RNA-Seq ExpressionHG10020054
SyntenyHG10020054
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043818.1 protein YLS9 [Cucumis melo var. makuwa]8.6e-12089.92Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        MA+TVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRKV+HDN+++YYFSSATKT+TKTNQ KKKNPPENVMLLRRN GIENE LSGF+SPVMDRYEYEER RKLQLE+EKYL+S+Q+NNLTM GG DGGRN
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
         + RSET  CRDC+SAKE GVAAGFHCCANDAVTAGFRS AGPIARPV
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

KAG6580743.1 hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia]4.4e-10882.66Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        M ET  GVSFPIVFHDGE+D  IGSVIVSSST+FKNFQS LSKMIGISSHQFTVYLAEYKISLD STKIRRRIPITGKVNFGAIS EKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRKV  +N+DEYY  SATKTK KTNQ  KKNPPENVMLLRRN GIEN+ LSGFISP MDRY+YEER RKLQLE+E Y  S+ L NLT  G  DGG N
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
        G+V+S+TTACRDCLSAKETG A GFHCCANDAVTAGFRSHAGPIARP+
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

KAG7017495.1 hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-10781.85Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        M ET  GVSFPIVFHDGE+D  IGSVIVSSST+FKNFQS LSKMIGISSHQFTVYLAEYKISLD STKIRRRIPITGKVNFGAIS EKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRKV  +N+DEYY  SATKTK KTNQ  KKNPPENVMLLRRN GIEN+ LSGFISP MDRY+YEER RKLQLE+E Y  S+ + NLT  G  DG  N
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
        G+V+S+TTACRDCLSAKETG A GFHCCANDAVTAGFRSHAGPIARP+
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

KAG7028150.1 hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-9777.42Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRK +  N+DEY FSSATKT TKTN SKKKNP ENVMLL+RNTGIENE L GFISPV +R+EY++RF KLQLE EKYL+ I   NL + GG  G +N
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
        GT R +T  C DCL+AKETGVAAGFHCCA+DAVT GFRSHAGPIARPV
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

XP_031739121.1 uncharacterized protein LOC116402855 [Cucumis sativus]1.4e-11789.52Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRKV+HDN+++YYFSSATKT+TKTN  KKKNPPENVMLLRRN GIENE L+GFISPVMDRYEYE+R RKLQLEKEKYLMSIQ++NL M  G DGGRN
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
         + RSE   C DCLSAKE GVAAGFHCCANDAVTAGFRSHAGPIARPV
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

TrEMBL top hitse value%identityAlignment
A0A0A0LER6 Uncharacterized protein6.7e-11889.52Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRKV+HDN+++YYFSSATKT+TKTN  KKKNPPENVMLLRRN GIENE L+GFISPVMDRYEYE+R RKLQLEKEKYLMSIQ++NL M  G DGGRN
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
         + RSE   C DCLSAKE GVAAGFHCCANDAVTAGFRSHAGPIARPV
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

A0A2P5B3I7 Uncharacterized protein1.0e-4951.17Show/hide
Query:  GVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRK
        GVSFPIVF DGE +T+IGS  VS + +FK FQS LS+ IGIS HQF+VYL        SS + R+RIPITGK NFGAIS EK  FF+VVLKRS+RERRR+
Subjt:  GVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRK

Query:  -VVHDN-DDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGI--ENEFLSGFISPVMDRYEYEERFRKLQLEKEK--YLMSIQLNNLTMSGGRDGGR-
         + H N  ++ Y+SS+  T    ++S KK PPENV LLRR+  I   ++ L GF+SP  DR  Y  + R  QLEK++  YLM++ L+ L    GRD  + 
Subjt:  -VVHDN-DDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGI--ENEFLSGFISPVMDRYEYEERFRKLQLEKEK--YLMSIQLNNLTMSGGRDGGR-

Query:  ------NGTVR--SETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARP
                +VR       C DCL A+E+G   GFH C  D VT GFRS  GPIARP
Subjt:  ------NGTVR--SETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARP

A0A5A7TLT1 Protein YLS94.2e-12089.92Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        MA+TVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN
        RERRRKV+HDN+++YYFSSATKT+TKTNQ KKKNPPENVMLLRRN GIENE LSGF+SPVMDRYEYEER RKLQLE+EKYL+S+Q+NNLTM GG DGGRN
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRN

Query:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
         + RSET  CRDC+SAKE GVAAGFHCCANDAVTAGFRS AGPIARPV
Subjt:  GTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

A0A6A1UKZ8 Uncharacterized protein1.2e-5549.6Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        M E   GVSFP+VF DGER++NIG+V+VS S +FK+FQS +S+ IGIS HQF+VYLA     +   ++  R+IPITGK NFG I  +K+ FFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGG--
        RER+R+    + ++ Y++S+     + N+      PENVMLLRRN  I ++   GF SP++DR  YE+R R+LQ+E+E+YL ++ L  L +    +GG  
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGG--

Query:  RNGTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
         N   R+    C +C+ AK  G   GFH C  DAVT+GFRS AGPIARPV
Subjt:  RNGTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

A0A6P9E6Z6 uncharacterized protein LOC1183479059.5e-5649.8Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR
        M    +GVSFP+VF DGER+T+IG V+V  S  FKNFQS LS+ IGIS HQF+VYLA     +   ++  R+IPITGKVNF AIS EK+ FFLV+LKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSR

Query:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGG--
        RER+R+   +  +E Y++S+        Q + K  P NVMLLRR+ G E +   G++SP++DR  YE+R ++LQ+E+E+YL+++ L+ L++    +GG  
Subjt:  RERRRKVVHDNDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGG--

Query:  -----RNGTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV
             RNG V  E   C +C+ AK+ G   GFH C  D VT GFRS AGPIARPV
Subjt:  -----RNGTVRSETTACRDCLSAKETGVAAGFHCCANDAVTAGFRSHAGPIARPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGATGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAGTTCAAGAATTT
CCAGTCGAGTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTATCTGGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTC
CAATCACCGGGAAGGTCAACTTCGGCGCAATCTCCGGCGAGAAGAATAGTTTCTTTCTTGTGGTTTTGAAACGGTCAAGACGCGAGAGGAGGCGAAAGGTCGTTCACGAC
AACGACGACGAATATTACTTCTCATCGGCGACGAAGACAAAAACAAAGACGAATCAATCAAAGAAGAAGAATCCACCGGAGAATGTGATGTTGTTGAGACGAAACACCGG
CATCGAAAACGAATTTCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGATTTCGGAAGCTGCAGTTGGAGAAGGAGAAGTACTTAATGAGCA
TACAGCTAAACAATCTGACGATGAGCGGAGGCAGAGATGGGGGCCGGAACGGTACTGTGAGATCGGAAACGACAGCCTGCCGTGATTGCCTGAGTGCGAAAGAGACCGGG
GTGGCGGCTGGATTTCACTGCTGCGCCAACGACGCCGTGACAGCGGGATTCCGATCACACGCGGGTCCGATTGCCCGACCCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGATGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAGTTCAAGAATTT
CCAGTCGAGTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTATCTGGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTC
CAATCACCGGGAAGGTCAACTTCGGCGCAATCTCCGGCGAGAAGAATAGTTTCTTTCTTGTGGTTTTGAAACGGTCAAGACGCGAGAGGAGGCGAAAGGTCGTTCACGAC
AACGACGACGAATATTACTTCTCATCGGCGACGAAGACAAAAACAAAGACGAATCAATCAAAGAAGAAGAATCCACCGGAGAATGTGATGTTGTTGAGACGAAACACCGG
CATCGAAAACGAATTTCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGATTTCGGAAGCTGCAGTTGGAGAAGGAGAAGTACTTAATGAGCA
TACAGCTAAACAATCTGACGATGAGCGGAGGCAGAGATGGGGGCCGGAACGGTACTGTGAGATCGGAAACGACAGCCTGCCGTGATTGCCTGAGTGCGAAAGAGACCGGG
GTGGCGGCTGGATTTCACTGCTGCGCCAACGACGCCGTGACAGCGGGATTCCGATCACACGCGGGTCCGATTGCCCGACCCGTTTAA
Protein sequenceShow/hide protein sequence
MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVVHD
NDDEYYFSSATKTKTKTNQSKKKNPPENVMLLRRNTGIENEFLSGFISPVMDRYEYEERFRKLQLEKEKYLMSIQLNNLTMSGGRDGGRNGTVRSETTACRDCLSAKETG
VAAGFHCCANDAVTAGFRSHAGPIARPV