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HG10020057 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020057
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRegulatory particle non-ATPase 10
Genome locationChr04:28416972..28417262
RNA-Seq ExpressionHG10020057
SyntenyHG10020057
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZM99200.1 hypothetical protein DCAR_013438 [Daucus carota subsp. sativus]1.1e-1459.79Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGD-GSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD
        +ALV   D G  SDLL PV   DVE+VVVDSD AVGV+  D + E+GGE+ GD G VEGVDG VL+ E+GL   E+GPDDE+GEE +E++D +DGAD
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGD-GSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD

PON70095.1 hypothetical protein PanWU01x14_082700 [Parasponia andersonii]1.8e-0955.95Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEE
        +ALV  RD G   DLLV VD  DVE VVVD D  VGVA GD   E+GG++ GD  VEGVDGDVL+ ESGL   + GP  E+ ++
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEE

PON97416.1 hypothetical protein TorRG33x02_068830 [Trema orientale]1.3e-1059.74Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGP
        +ALV  RD G   DLLV VD  DVE VVVD D  V VA GD + E+GG++ GDG VEGVDGDVL+ ESGL   + GP
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGP

RXH76386.1 hypothetical protein DVH24_019274 [Malus domestica]2.4e-0955.56Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDED
        +ALV  RD+  E DLL  V  VDVE VVVD+D  V V+ GD + E GGE  G G VE  DGDVL+ E+GLG  EDGP DED ++ +E ED
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDED

TYK04331.1 hypothetical protein E5676_scaffold21333G00010 [Cucumis melo var. makuwa]5.3e-0951.04Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD
        +ALV   + G ESDLLV V+ VDVE VV+DSD  VGVA  D + + GG++   G +E VDG VL  E GL R ++GP+ ED EE EE+++ D G D
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD

TrEMBL top hitse value%identityAlignment
A0A0A0LE53 Uncharacterized protein5.5e-2882.29Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD
        MALV+ RDDGPESDLLV VD VDVE VVVDSD+AV VA G+SEEEIGGE+AGDG VEGVDGDVLK ESG G  EDGPDDEDGEE EEDEDADD AD
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD

A0A162ADF4 Uncharacterized protein5.4e-1559.79Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGD-GSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD
        +ALV   D G  SDLL PV   DVE+VVVDSD AVGV+  D + E+GGE+ GD G VEGVDG VL+ E+GL   E+GPDDE+GEE +E++D +DGAD
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGD-GSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD

A0A2P5D9X2 Uncharacterized protein8.9e-1055.95Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEE
        +ALV  RD G   DLLV VD  DVE VVVD D  VGVA GD   E+GG++ GD  VEGVDGDVL+ ESGL   + GP  E+ ++
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEE

A0A2P5FI15 Uncharacterized protein6.1e-1159.74Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGP
        +ALV  RD G   DLLV VD  DVE VVVD D  V VA GD + E+GG++ GDG VEGVDGDVL+ ESGL   + GP
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGP

A0A498HYB9 Uncharacterized protein1.2e-0955.56Show/hide
Query:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDED
        +ALV  RD+  E DLL  V  VDVE VVVD+D  V V+ GD + E GGE  G G VE  DGDVL+ E+GLG  EDGP DED ++ +E ED
Subjt:  MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTGGTAAAACCGAGGGATGATGGTCCGGAGAGTGATCTGTTGGTTCCGGTAGATAGCGTAGACGTGGAGGTCGTCGTAGTAGATTCCGATGCGGCGGTTGGGGT
TGCGAGCGGAGACAGTGAGGAGGAAATTGGAGGTGAGAAAGCTGGGGACGGTAGCGTTGAAGGCGTAGACGGTGACGTCTTGAAGGTAGAAAGTGGGCTTGGTAGGGCGG
AGGACGGCCCAGACGATGAGGATGGTGAGGAGTACGAGGAAGATGAAGATGCCGATGATGGCGCCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTGGTAAAACCGAGGGATGATGGTCCGGAGAGTGATCTGTTGGTTCCGGTAGATAGCGTAGACGTGGAGGTCGTCGTAGTAGATTCCGATGCGGCGGTTGGGGT
TGCGAGCGGAGACAGTGAGGAGGAAATTGGAGGTGAGAAAGCTGGGGACGGTAGCGTTGAAGGCGTAGACGGTGACGTCTTGAAGGTAGAAAGTGGGCTTGGTAGGGCGG
AGGACGGCCCAGACGATGAGGATGGTGAGGAGTACGAGGAAGATGAAGATGCCGATGATGGCGCCGATTAG
Protein sequenceShow/hide protein sequence
MALVKPRDDGPESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEKAGDGSVEGVDGDVLKVESGLGRAEDGPDDEDGEEYEEDEDADDGAD