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HG10020069 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020069
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionThioredoxin-dependent peroxiredoxin
Genome locationChr04:28520426..28522297
RNA-Seq ExpressionHG10020069
SyntenyHG10020069
Gene Ontology termsGO:0098869 - cellular oxidant detoxification (biological process)
GO:0051920 - peroxiredoxin activity (molecular function)
InterPro domainsIPR034904 - Fe-S cluster assembly domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136506.1 uncharacterized protein LOC101205788 [Cucumis sativus]1.0e-6285.44Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV
        MRLQAP+LR  IVS+ S   IAATF+TAPPPIS FR P    SL+LR RT R +F VSAT VPDQRPLDLTEENVRQALGEARVELAQIFD SVGITGVV
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV

Query:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

XP_008442900.1 PREDICTED: uncharacterized protein LOC103486663 [Cucumis melo]1.6e-6386.08Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV
        MRLQAP+LRH IVS  S S  AATFFTAPPPIS FRPP    SLRL  RT R +  VSAT VPDQRPLDLTEENV+QALGEARVELAQIFD SVGITGVV
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV

Query:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

XP_022983136.1 uncharacterized protein LOC111481776 [Cucurbita maxima]2.7e-5576.88Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITG
        MRLQ  +LRH I  S SPS + ATFFT+ PPIS     R   P+L  L   +RR +  VSATAVPD RPLDLTE+NVRQALG+AR ELAQIFD SVGITG
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITG

Query:  VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

XP_038903951.1 uncharacterized protein LOC120090394 isoform X1 [Benincasa hispida]1.1e-6786.75Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI
        MRLQAP+LRH IVSS SPSPIAATFFT+ P ISTFRPPH SLR RFRTR      R R TVSATAVPDQRPLDLTEENVRQALGE RVELAQIFDGSVGI
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI

Query:  TGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIP----EILEVEIEDESQLDDSPASF
        TGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIP    EILEVEIEDESQLDDSPASF
Subjt:  TGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIP----EILEVEIEDESQLDDSPASF

XP_038903952.1 uncharacterized protein LOC120090394 isoform X2 [Benincasa hispida]2.0e-6988.89Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI
        MRLQAP+LRH IVSS SPSPIAATFFT+ P ISTFRPPH SLR RFRTR      R R TVSATAVPDQRPLDLTEENVRQALGE RVELAQIFDGSVGI
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI

Query:  TGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        TGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  TGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

TrEMBL top hitse value%identityAlignment
A0A0A0LGR7 Uncharacterized protein5.0e-6385.44Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV
        MRLQAP+LR  IVS+ S   IAATF+TAPPPIS FR P    SL+LR RT R +F VSAT VPDQRPLDLTEENVRQALGEARVELAQIFD SVGITGVV
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV

Query:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

A0A1S3B7J1 uncharacterized protein LOC1034866637.8e-6486.08Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV
        MRLQAP+LRH IVS  S S  AATFFTAPPPIS FRPP    SLRL  RT R +  VSAT VPDQRPLDLTEENV+QALGEARVELAQIFD SVGITGVV
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVV

Query:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  ELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

A0A6J1CS17 uncharacterized protein LOC1110142312.4e-4968.1Show/hide
Query:  MRLQAPYLRHIIVSSS-------SPSPIAATFFTAPPPISTFRPPHPSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVG
        MR  AP+  H  ++SS       +P+P+A   F  PP  S  R P P+   R  +RR + +V A AVP+QRPLDLTEENV +AL +AR+ELAQIFD SVG
Subjt:  MRLQAPYLRHIIVSSS-------SPSPIAATFFTAPPPISTFRPPHPSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVG

Query:  ITGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        ITGVVELAELDGPFVKISL+GRFWHKRSTVVARVGNYLKNRIPEILEVEIE+ESQLDDSPASF
Subjt:  ITGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

A0A6J1F3P2 uncharacterized protein LOC1114418373.3e-5475.62Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLRL-RFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITG
        MRLQ  +LRH I  S SPS + ATFFT+ PPIS     R   P L L    +RR +  VSATA PD RPLDLTE+NVRQAL +AR ELAQIFD SVGITG
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLRL-RFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITG

Query:  VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

A0A6J1J196 uncharacterized protein LOC1114817761.3e-5576.88Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITG
        MRLQ  +LRH I  S SPS + ATFFT+ PPIS     R   P+L  L   +RR +  VSATAVPD RPLDLTE+NVRQALG+AR ELAQIFD SVGITG
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITG

Query:  VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  VVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33180.1 unknown protein2.0e-3565.52Show/hide
Query:  SLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILE
        S + R RT      VS + V    PLDLTE+N+   L EAR+ELAQ+FD SVGITG VEL ELDGPFV ISL+G+FWH R+ V+AR+GNYLK RIPEILE
Subjt:  SLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILE

Query:  VEIEDESQLDDSPASF
        V IEDE QLDDSPA+F
Subjt:  VEIEDESQLDDSPASF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCTACAGGCGCCATATCTCCGCCACATCATCGTCTCATCTTCGTCTCCATCGCCAATAGCCGCCACCTTCTTCACCGCACCTCCTCCGATTTCGACCTTCCGACC
GCCGCATCCCAGTCTGCGATTGAGATTCAGGACGCGGAGAGGAAGATTCACCGTTTCGGCAACGGCAGTTCCAGATCAACGGCCGCTGGATCTGACGGAGGAGAACGTGA
GACAGGCACTCGGGGAAGCTCGTGTGGAGCTAGCGCAGATCTTCGATGGCTCCGTCGGCATTACAGGAGTGGTGGAATTGGCAGAATTGGACGGACCATTTGTGAAAATT
AGTCTGAAAGGTCGGTTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGAACAGAATCCCTGAGATTTTGGAGGTTGAAATAGAAGATGAGAG
TCAATTGGATGATAGTCCTGCAAGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCTACAGGCGCCATATCTCCGCCACATCATCGTCTCATCTTCGTCTCCATCGCCAATAGCCGCCACCTTCTTCACCGCACCTCCTCCGATTTCGACCTTCCGACC
GCCGCATCCCAGTCTGCGATTGAGATTCAGGACGCGGAGAGGAAGATTCACCGTTTCGGCAACGGCAGTTCCAGATCAACGGCCGCTGGATCTGACGGAGGAGAACGTGA
GACAGGCACTCGGGGAAGCTCGTGTGGAGCTAGCGCAGATCTTCGATGGCTCCGTCGGCATTACAGGAGTGGTGGAATTGGCAGAATTGGACGGACCATTTGTGAAAATT
AGTCTGAAAGGTCGGTTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGAACAGAATCCCTGAGATTTTGGAGGTTGAAATAGAAGATGAGAG
TCAATTGGATGATAGTCCTGCAAGCTTTTAA
Protein sequenceShow/hide protein sequence
MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITGVVELAELDGPFVKI
SLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF