CuGenDBv2

Gene ID	HG10020090
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Embryo defective
Genome location	Chr04:28689038..28691941
RNA-Seq Expression	HG10020090
Synteny	HG10020090
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442875.1 PREDICTED: uncharacterized protein LOC103486641 [Cucumis melo]

1.7e-76

92.45

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Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKA+IVFRK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTNS KSAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEGIQQVMEKKD SDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_022144745.1 uncharacterized protein LOC111014361 [Momordica charantia]

2.0e-77

94.34

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Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MK RIV RK+YDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTN+AKSA KEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEG+QQVMEKK+ SDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_022934670.1 uncharacterized protein LOC111441792 [Cucurbita moschata]

9.2e-75

90.57

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Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKARIV RK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        +AARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKK +SDS+KGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_023522298.1 uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo]

9.9e-77

92.45

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Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKARIV RK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKK++SDSQKGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_038905860.1 uncharacterized protein LOC120091803 [Benincasa hispida]

1.5e-77

94.97

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Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MK RIV RKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKV+ESENKTNS KSAPKEK PSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEGIQ V+EKKDVSDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B6Q8 uncharacterized protein LOC103486641

8.2e-77

92.45

Show/hide

Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKA+IVFRK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTNS KSAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEGIQQVMEKKD SDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A5D3DNS5 Uncharacterized protein

7.6e-75

91.67

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Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKA+IVFRK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTNS KSAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGS
        VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEGIQQVMEKKD SDSQKG+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGS

A0A6J1CSI2 uncharacterized protein LOC111014361

9.6e-78

94.34

Show/hide

Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MK RIV RK+YDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTN+AKSA KEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEG+QQVMEKK+ SDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A6J1F8D8 uncharacterized protein LOC111441792

4.5e-75

90.57

Show/hide

Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKARIV RK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        +AARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKK +SDS+KGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A6J1J6G3 uncharacterized protein LOC111481775

7.6e-75

90.57

Show/hide

Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MKARIV RK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSA+SAPKEKEPSTLEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI
        VAARGGMETLKPALQRVYMT+AS YRDALK+FIDGYQEGIQQVMEKK++SDSQKGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G06240.1 embryo defective 2735

1.9e-57

73.68

Show/hide

Query:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA
        MK ++V+RKV DYI YDLKEI  PSSLPDPPHV KRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPNDYK +        AK A  E EPS LEDLA
Subjt:  MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDS
        VAARGGMETL+PAL R+YMTRAS Y+DAL SFI GY EG+QQVM+ K  S++
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGCGAGGATCGTTTTCAGGAAGGTTTATGATTACATTCGGTATGACTTGAAGGAAATTGCATTTCCTTCGTCGTTGCCAGATCCCCCGCATGTAAAGAAGCGTCG
AAAGCTTACATGGCATGAACGATTCTTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTGCGGGACATTGGTCCTGACCTGCGACCAAATGACTATAAAG
TAGAAGAAAGCGAAAACAAAACAAATTCAGCAAAAAGTGCGCCTAAAGAGAAAGAACCTTCAACACTTGAAGACCTGGCTGTGGCTGCAAGAGGAGGAATGGAGACACTA
AAACCAGCTTTGCAACGGGTGTATATGACTAGAGCTTCTGCATATAGAGACGCTCTAAAAAGTTTTATAGATGGGTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAA
GGACGTTTCTGATTCCCAAAAGGGAAGCGATAAAATCTAA

mRNA sequence

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Protein sequence

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MKARIVFRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLAVAARGGMETL
KPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKDVSDSQKGSDKI

HG10020090 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome