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HG10020091 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020091
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:28695697..28696029
RNA-Seq ExpressionHG10020091
SyntenyHG10020091
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043852.1 hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa]4.5e-2058.1Show/hide
Query:  LVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAT
        +  M+FT  LA +  N   ++RQFEENEN    ++LFSD SN+V EGV Y ND  RKM+K A      PP PS C+GNFCGGGLLPC EPC C+IP+GAT
Subjt:  LVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAT

Query:  RGYCV
        RG CV
Subjt:  RGYCV

KAG6580718.1 hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1850.42Show/hide
Query:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAAP---------PRPSCFGNFCGGGLLPCA
        MEGKK+ALVV+LV M FTS+LA                     + +L +DGSND  G +   D   KM + AP         PRPSCFGNFCGGGLLPC 
Subjt:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAAP---------PRPSCFGNFCGGGLLPCA

Query:  EPCQCNIPMGATRGYCVDF
        EPC C IPMG+ RG CVDF
Subjt:  EPCQCNIPMGATRGYCVDF

KGN59161.1 hypothetical protein Csa_002402 [Cucumis sativus]2.9e-2765.22Show/hide
Query:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAA-------PPRPSCFGNFCGGGLLPCAEP
        MEGKKLALVV++V  +FT SLAQ   NDD  +RQFE+NEN    ++LFSDGSND +GV Y +D  RKMMK A       PP P CFGNFCGGGLL C EP
Subjt:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAA-------PPRPSCFGNFCGGGLLPCAEP

Query:  CQCNIPMGATRGYCV
        C CNIPMGATRG CV
Subjt:  CQCNIPMGATRGYCV

TYK30388.1 hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa]1.6e-2562.07Show/hide
Query:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAE
        MEGKKLALVVV+  M+FT  LA +  N   ++RQFEENEN    ++LFSD SN+V EGV Y ND  RKM+K A      PP PS C+GNFCGGGLLPC E
Subjt:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAE

Query:  PCQCNIPMGATRGYCV
        PC C+IP+GATRG CV
Subjt:  PCQCNIPMGATRGYCV

TrEMBL top hitse value%identityAlignment
A0A0A0LGQ3 Uncharacterized protein1.4e-2765.22Show/hide
Query:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAA-------PPRPSCFGNFCGGGLLPCAEP
        MEGKKLALVV++V  +FT SLAQ   NDD  +RQFE+NEN    ++LFSDGSND +GV Y +D  RKMMK A       PP P CFGNFCGGGLL C EP
Subjt:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAA-------PPRPSCFGNFCGGGLLPCAEP

Query:  CQCNIPMGATRGYCV
        C CNIPMGATRG CV
Subjt:  CQCNIPMGATRGYCV

A0A5A7TKL8 Uncharacterized protein2.2e-2058.1Show/hide
Query:  LVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAT
        +  M+FT  LA +  N   ++RQFEENEN    ++LFSD SN+V EGV Y ND  RKM+K A      PP PS C+GNFCGGGLLPC EPC C+IP+GAT
Subjt:  LVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAT

Query:  RGYCV
        RG CV
Subjt:  RGYCV

A0A5D3E3L2 Uncharacterized protein7.7e-2662.07Show/hide
Query:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAE
        MEGKKLALVVV+  M+FT  LA +  N   ++RQFEENEN    ++LFSD SN+V EGV Y ND  RKM+K A      PP PS C+GNFCGGGLLPC E
Subjt:  MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDV-EGVNYINDNPRKMMKAA------PPRPS-CFGNFCGGGLLPCAE

Query:  PCQCNIPMGATRGYCV
        PC C+IP+GATRG CV
Subjt:  PCQCNIPMGATRGYCV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAAGAAGCTAGCTTTGGTGGTGGTGTTGGTGGCGATGGTATTTACGAGTTCGTTAGCTCAACTTGTCTCGAACGACGATGAACAACAACGTCAGTTCGAGGA
AAATGAAAATGACAACAATAAACTCCGACTCTTCTCTGACGGTAGCAACGATGTCGAAGGAGTAAACTACATTAACGATAACCCGAGAAAAATGATGAAAGCGGCACCGC
CGCGCCCCTCATGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCCTGTGCTGAACCCTGCCAATGCAACATTCCAATGGGTGCAACAAGGGGATATTGTGTTGACTTT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAAAGAAGCTAGCTTTGGTGGTGGTGTTGGTGGCGATGGTATTTACGAGTTCGTTAGCTCAACTTGTCTCGAACGACGATGAACAACAACGTCAGTTCGAGGA
AAATGAAAATGACAACAATAAACTCCGACTCTTCTCTGACGGTAGCAACGATGTCGAAGGAGTAAACTACATTAACGATAACCCGAGAAAAATGATGAAAGCGGCACCGC
CGCGCCCCTCATGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCCTGTGCTGAACCCTGCCAATGCAACATTCCAATGGGTGCAACAAGGGGATATTGTGTTGACTTT
TAA
Protein sequenceShow/hide protein sequence
MEGKKLALVVVLVAMVFTSSLAQLVSNDDEQQRQFEENENDNNKLRLFSDGSNDVEGVNYINDNPRKMMKAAPPRPSCFGNFCGGGLLPCAEPCQCNIPMGATRGYCVDF