; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020097 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020097
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSenescence regulator
Genome locationChr04:28740870..28741514
RNA-Seq ExpressionHG10020097
SyntenyHG10020097
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442865.1 PREDICTED: uncharacterized protein LOC103486633 [Cucumis melo]5.8e-8882.57Show/hide
Query:  SAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTI
        +A AA LLRHSS SSHHFLHF SS P QT PAVS SDEF+ESELFWTADF  SSNN    SRRISSDD ASSFIPPPNSGILAAL+DD+ Y+RK+RIGTI
Subjt:  SAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTI

Query:  LTRETSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVG-------REEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKG
        LTR+TSITKS SSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPI VPEAMRK RN G        EEE+MLPPHEIV RGSG+SPNTTFSVLEGAGRTLKG
Subjt:  LTRETSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVG-------REEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKG

Query:  RDLRRVRNAVWHRTGFVD
        RDLRRVRNAVWHRTGFVD
Subjt:  RDLRRVRNAVWHRTGFVD

XP_011652020.2 uncharacterized protein LOC105434977 [Cucumis sativus]1.4e-8178.54Show/hide
Query:  AAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTILTR
        AA LL HSS SSHHFLHF SS P  T PA+S SDEF+ESELFWTADF  SSNN    SR+IS+DD ASSFIPPPNSGILAAL+DD +YDRK+RIGTILTR
Subjt:  AAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTILTR

Query:  E-TSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN----------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLK
        + TSITKS SSS RSIPRPVQSNR+YSQSVPCRKFQQSAPI VPEAMRK RN             EEE+MLPPHEIV RGSG+SPNTTFSVLEGAGRTLK
Subjt:  E-TSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN----------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLK

Query:  GRDLRRVRNAVWHRTGFVD
        GRDLRRVRNAVWHRTGFVD
Subjt:  GRDLRRVRNAVWHRTGFVD

XP_022943240.1 uncharacterized protein LOC111448027 [Cucurbita moschata]1.7e-7168.78Show/hide
Query:  SSAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGT
        S+AA+A+ LRHSSS SHH+L  FSS PP +  AV++SDEF+ESE+FWT+DF   SNN PF +R+IS++D  SSF   PNSGILAAL+DDAD++ KQRIGT
Subjt:  SSAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGT

Query:  ILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQR--------NVGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRT
        I+TRETS+  + SSSS RSIP+P+QS+R+YSQS+P RKFQQSAPINVP+AMRKQR            E+EEMLPPHEIV RG GV PNTTFS+LEG GRT
Subjt:  ILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQR--------NVGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRT

Query:  LKGRDLRRVRNAVWHRTGFVD
        LKGRDLR+VRNAVWHRTGFVD
Subjt:  LKGRDLRRVRNAVWHRTGFVD

XP_023005734.1 uncharacterized protein LOC111498642 [Cucurbita maxima]7.6e-7268.3Show/hide
Query:  MDSS--AAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQ
        MDSS  AA+A+ LRHSSS SHH+L  FSS PP +   V++SDEF+ESE+FWT+DF   SNN PF +R+IS++D  SSF  PPNSGILAAL+DDAD++ KQ
Subjt:  MDSS--AAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQ

Query:  RIGTILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN-------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGA
        RIGTI+TRET++  + SSSS R IP+P+QS+++YSQS+P RKFQQSAPINVP+AMRKQRN          E+EEMLPPHEIV RG GV PNTTFS+LEG 
Subjt:  RIGTILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN-------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGA

Query:  GRTLKGRDLRRVRNAVWHRTGFVD
        GRTLKGRDLR+VRNAVWHRTGFVD
Subjt:  GRTLKGRDLRRVRNAVWHRTGFVD

XP_023539527.1 uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo]1.6e-6966.96Show/hide
Query:  MDSS--AAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQ
        MDSS  AA+A+ LRHSSS  HH+L  FSS PP +  AV++SDEF+ESE+FWT+DF   SNN PF +R+IS++D  SSF    NSGILAAL+D+AD++ +Q
Subjt:  MDSS--AAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQ

Query:  RIGTILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN-------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGA
        RIGTI+TRETS+  + SSSS RSIP+P+QS+R+YSQS+P RKFQQSAPINVP++M+KQRN          E+EEMLPPHEIV RG GV PNTTFS+LEG 
Subjt:  RIGTILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN-------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGA

Query:  GRTLKGRDLRRVRNAVWHRTGFVD
        GRTLKGRDLR+VRNAVWHRTGFVD
Subjt:  GRTLKGRDLRRVRNAVWHRTGFVD

TrEMBL top hitse value%identityAlignment
A0A0A0LAY5 Uncharacterized protein6.6e-8278.54Show/hide
Query:  AAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTILTR
        AA LL HSS SSHHFLHF SS P  T PA+S SDEF+ESELFWTADF  SSNN    SR+IS+DD ASSFIPPPNSGILAAL+DD +YDRK+RIGTILTR
Subjt:  AAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTILTR

Query:  E-TSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN----------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLK
        + TSITKS SSS RSIPRPVQSNR+YSQSVPCRKFQQSAPI VPEAMRK RN             EEE+MLPPHEIV RGSG+SPNTTFSVLEGAGRTLK
Subjt:  E-TSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN----------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLK

Query:  GRDLRRVRNAVWHRTGFVD
        GRDLRRVRNAVWHRTGFVD
Subjt:  GRDLRRVRNAVWHRTGFVD

A0A1S3B6S2 uncharacterized protein LOC1034866332.8e-8882.57Show/hide
Query:  SAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTI
        +A AA LLRHSS SSHHFLHF SS P QT PAVS SDEF+ESELFWTADF  SSNN    SRRISSDD ASSFIPPPNSGILAAL+DD+ Y+RK+RIGTI
Subjt:  SAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTI

Query:  LTRETSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVG-------REEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKG
        LTR+TSITKS SSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPI VPEAMRK RN G        EEE+MLPPHEIV RGSG+SPNTTFSVLEGAGRTLKG
Subjt:  LTRETSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVG-------REEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKG

Query:  RDLRRVRNAVWHRTGFVD
        RDLRRVRNAVWHRTGFVD
Subjt:  RDLRRVRNAVWHRTGFVD

A0A5A7TLX9 Senescence regulator2.8e-8882.57Show/hide
Query:  SAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTI
        +A AA LLRHSS SSHHFLHF SS P QT PAVS SDEF+ESELFWTADF  SSNN    SRRISSDD ASSFIPPPNSGILAAL+DD+ Y+RK+RIGTI
Subjt:  SAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTI

Query:  LTRETSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVG-------REEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKG
        LTR+TSITKS SSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPI VPEAMRK RN G        EEE+MLPPHEIV RGSG+SPNTTFSVLEGAGRTLKG
Subjt:  LTRETSITKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVG-------REEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKG

Query:  RDLRRVRNAVWHRTGFVD
        RDLRRVRNAVWHRTGFVD
Subjt:  RDLRRVRNAVWHRTGFVD

A0A6J1FXK6 uncharacterized protein LOC1114480278.1e-7268.78Show/hide
Query:  SSAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGT
        S+AA+A+ LRHSSS SHH+L  FSS PP +  AV++SDEF+ESE+FWT+DF   SNN PF +R+IS++D  SSF   PNSGILAAL+DDAD++ KQRIGT
Subjt:  SSAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGT

Query:  ILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQR--------NVGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRT
        I+TRETS+  + SSSS RSIP+P+QS+R+YSQS+P RKFQQSAPINVP+AMRKQR            E+EEMLPPHEIV RG GV PNTTFS+LEG GRT
Subjt:  ILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQR--------NVGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRT

Query:  LKGRDLRRVRNAVWHRTGFVD
        LKGRDLR+VRNAVWHRTGFVD
Subjt:  LKGRDLRRVRNAVWHRTGFVD

A0A6J1L041 uncharacterized protein LOC1114986423.7e-7268.3Show/hide
Query:  MDSS--AAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQ
        MDSS  AA+A+ LRHSSS SHH+L  FSS PP +   V++SDEF+ESE+FWT+DF   SNN PF +R+IS++D  SSF  PPNSGILAAL+DDAD++ KQ
Subjt:  MDSS--AAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQ

Query:  RIGTILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN-------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGA
        RIGTI+TRET++  + SSSS R IP+P+QS+++YSQS+P RKFQQSAPINVP+AMRKQRN          E+EEMLPPHEIV RG GV PNTTFS+LEG 
Subjt:  RIGTILTRETSITKS-SSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRN-------VGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGA

Query:  GRTLKGRDLRRVRNAVWHRTGFVD
        GRTLKGRDLR+VRNAVWHRTGFVD
Subjt:  GRTLKGRDLRRVRNAVWHRTGFVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11700.1 Protein of unknown function, DUF5846.7e-1041.11Show/hide
Query:  RKFQQSAPINVPE--------AMRKQRNVGREEEE----MLPPHEIVGRGSGVSPNTT---FSVLEGAGRTLKGRDLRRVRNAVWHRTGF
        R+   SAP+NVP+        ++        EEEE    M+PPHE + +        +    SV EG GRTLKGR+LRRVR+A+W +TGF
Subjt:  RKFQQSAPINVPE--------AMRKQRNVGREEEE----MLPPHEIVGRGSGVSPNTT---FSVLEGAGRTLKGRDLRRVRNAVWHRTGF

AT1G61930.1 Protein of unknown function, DUF5848.8e-1042.39Show/hide
Query:  RKFQQSAPINVP-----------EAMRKQRNVGREEEE--MLPPHEIV----GRGSGVSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGF
        RK   SAP+NVP           E++ +  +   E+EE  M+PPHE +     R S        SV +G GRTLKGR+LRRVR+A+W +TGF
Subjt:  RKFQQSAPINVP-----------EAMRKQRNVGREEEE--MLPPHEIV----GRGSGVSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGF

AT3G15040.1 Protein of unknown function, DUF5844.3e-1740Show/hide
Query:  SGILAALTDDA------DYDRKQRIGTILTRETSITKSSSSS---------------MRSIPRPVQSNRDYSQS-VPCRKFQQSAPINVPEAMRKQRNVG
        SGILAAL + +       +    +    L+   S T SSSSS               + + P+P Q    +S S V   K+ QSAP+ VP       N  
Subjt:  SGILAALTDDA------DYDRKQRIGTILTRETSITKSSSSS---------------MRSIPRPVQSNRDYSQS-VPCRKFQQSAPINVPEAMRKQRNVG

Query:  R---------------EEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD
        +               EE EMLPPHEIV R    S   + SVLEGAGRTLKGRDLR+VRNAV+ RTGF+D
Subjt:  R---------------EEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD

AT4G04630.1 Protein of unknown function, DUF5846.7e-1035.77Show/hide
Query:  RIGTILTRETSITK---SSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPE-------------AMRKQRNVGREEEE-----MLPPHEIVGRGSG
        R G   + E  I K   SSSSS  S P  ++ +++ S        Q SAP+NVP+             +     +   +++E     M+PPHE V R   
Subjt:  RIGTILTRETSITK---SSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPE-------------AMRKQRNVGREEEE-----MLPPHEIVGRGSG

Query:  VSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD
         +  ++FS+ EG GRTLKGRDL +VRNAV  +TGF++
Subjt:  VSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD

AT4G21970.1 Protein of unknown function, DUF5847.9e-1137.93Show/hide
Query:  SSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMR----KQRNVGR----------EEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKGRD
        SSSSS R IP+  + +    QS        SAP+N+P+  +     ++N             +E  M+PPHE+V +    +  ++FS+ EG GRTLKGRD
Subjt:  SSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMR----KQRNVGR----------EEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKGRD

Query:  LRRVRNAVWHRTGFVD
        L + RNAV  RTGF++
Subjt:  LRRVRNAVWHRTGFVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTTCCGCCGCCGCCGCCTATCTTCTCCGCCACTCCTCTTCTTCCTCCCACCACTTCCTCCACTTCTTCTCTTCCGCTCCGCCGCAAACTTCCCCCGCCGTCTC
CGCCTCCGACGAGTTCCACGAATCCGAGCTCTTCTGGACTGCCGATTTCGGCTTATCATCCAACAACTGCCCCTTCCCCTCCAGAAGAATCTCCAGCGACGATCACGCAT
CCAGTTTCATCCCTCCTCCAAACTCCGGCATCCTCGCCGCTCTAACTGATGACGCCGATTACGATCGGAAACAGAGAATCGGAACGATTCTGACTCGAGAGACTTCAATA
ACTAAATCCTCGTCGTCGTCGATGCGATCGATTCCGAGGCCGGTTCAGAGTAATAGAGATTATTCTCAATCCGTGCCTTGTAGGAAATTTCAGCAATCGGCTCCGATTAA
CGTGCCGGAAGCGATGAGGAAACAGAGGAATGTAGGGAGGGAGGAGGAGGAGATGTTGCCGCCGCATGAGATAGTGGGGAGAGGCTCCGGCGTGTCGCCGAACACGACAT
TTTCAGTGCTGGAAGGGGCGGGAAGGACTCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAATGCCGTTTGGCACAGAACAGGTTTTGTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCTTCCGCCGCCGCCGCCTATCTTCTCCGCCACTCCTCTTCTTCCTCCCACCACTTCCTCCACTTCTTCTCTTCCGCTCCGCCGCAAACTTCCCCCGCCGTCTC
CGCCTCCGACGAGTTCCACGAATCCGAGCTCTTCTGGACTGCCGATTTCGGCTTATCATCCAACAACTGCCCCTTCCCCTCCAGAAGAATCTCCAGCGACGATCACGCAT
CCAGTTTCATCCCTCCTCCAAACTCCGGCATCCTCGCCGCTCTAACTGATGACGCCGATTACGATCGGAAACAGAGAATCGGAACGATTCTGACTCGAGAGACTTCAATA
ACTAAATCCTCGTCGTCGTCGATGCGATCGATTCCGAGGCCGGTTCAGAGTAATAGAGATTATTCTCAATCCGTGCCTTGTAGGAAATTTCAGCAATCGGCTCCGATTAA
CGTGCCGGAAGCGATGAGGAAACAGAGGAATGTAGGGAGGGAGGAGGAGGAGATGTTGCCGCCGCATGAGATAGTGGGGAGAGGCTCCGGCGTGTCGCCGAACACGACAT
TTTCAGTGCTGGAAGGGGCGGGAAGGACTCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAATGCCGTTTGGCACAGAACAGGTTTTGTTGATTGA
Protein sequenceShow/hide protein sequence
MDSSAAAAYLLRHSSSSSHHFLHFFSSAPPQTSPAVSASDEFHESELFWTADFGLSSNNCPFPSRRISSDDHASSFIPPPNSGILAALTDDADYDRKQRIGTILTRETSI
TKSSSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPINVPEAMRKQRNVGREEEEMLPPHEIVGRGSGVSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD