; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020146 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020146
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRAB6-interacting golgin
Genome locationChr04:29239844..29241622
RNA-Seq ExpressionHG10020146
SyntenyHG10020146
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137876.1 GRB10-interacting GYF protein 2 [Cucumis sativus]3.3e-7599.4Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_008442808.1 PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]7.4e-7598.8Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022144720.1 uncharacterized protein LOC111014340 [Momordica charantia]1.5e-7095.21Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQTE  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYK+AL+AFN+KNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022945279.1 uncharacterized protein LOC111449572 [Cucurbita moschata]7.0e-7396.41Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_038903091.1 GRB10-interacting GYF protein 2-like [Benincasa hispida]6.7e-76100Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

TrEMBL top hitse value%identityAlignment
A0A0A0LGI7 RAB6-interacting golgin1.6e-7599.4Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A1S3B6L6 RAB6-interacting golgin3.6e-7598.8Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A5D3DPH8 RAB6-interacting golgin3.6e-7598.8Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1G0J9 RAB6-interacting golgin3.4e-7396.41Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1KYK3 RAB6-interacting golgin3.4e-7396.41Show/hide
Query:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID
        MQ EQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)5.3e-5573.94Show/hide
Query:  QAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNK
        Q QQQ   MV  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNK
Subjt:  QAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNK

Query:  ELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI
        ELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLME   LV ESE+LR+ KLEELSK+I+T+
Subjt:  ELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI

AT2G36410.2 Family of unknown function (DUF662)1.3e-5675.31Show/hide
Query:  QAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNK
        Q QQQ   MV  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNK
Subjt:  QAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNK

Query:  ELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        ELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  ELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT2G36410.3 Family of unknown function (DUF662)1.8e-5574.69Show/hide
Query:  QAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNK
        Q QQQ   MV  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNK
Subjt:  QAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNK

Query:  ELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        ELKPLG T QKK  EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  ELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G09980.1 Family of unknown function (DUF662)2.5e-6083.89Show/hide
Query:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKE
        +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA IREELE LADPMRKEVA VRKKID+VNKELKPLGHT QKKE
Subjt:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKE

Query:  KEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        +EYKEALEAFN+KN+EKVQLIT+LMELV ESE++R+KKLEELSKNID+I
Subjt:  KEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G52920.2 Family of unknown function (DUF662)2.0e-5476.1Show/hide
Query:  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKEL
        Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGRVEEET+RLA IREELE +ADPMRKEV  VRKKID+VNKEL
Subjt:  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKEL

Query:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT
        KPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LRLKKL+ELS++IDT
Subjt:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACCGAACAGGCTCAGCAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTC
GGCTCTCTCCACTTTCAGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCC
TCGCTTGCATCCGTGAGGAACTCGAGGCGCTAGCGGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAAGATCGATGCCGTAAACAAGGAATTAAAGCCTCTGGGA
CATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTCAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGA
AAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGACCGAACAGGCTCAGCAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTC
GGCTCTCTCCACTTTCAGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCC
TCGCTTGCATCCGTGAGGAACTCGAGGCGCTAGCGGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAAGATCGATGCCGTAAACAAGGAATTAAAGCCTCTGGGA
CATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTCAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGA
AAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA
Protein sequenceShow/hide protein sequence
MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLG
HTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR