; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020148 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020148
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiondehydration-responsive element-binding protein 1F-like
Genome locationChr04:29264520..29264924
RNA-Seq ExpressionHG10020148
SyntenyHG10020148
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651078.1 hypothetical protein Csa_001557 [Cucumis sativus]1.2e-5184.09Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        M SSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSFWVGTFCSPK AA+AYDVVALAIKGES  LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSI+DIR MA++TAE FTS D L  LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

NP_001267604.1 dehydration-responsive element-binding protein 1A-like [Cucumis sativus]1.2e-5184.09Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        M SSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSFWVGTFCSPK AA+AYDVVALAIKGES  LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSI+DIR MA++TAE FTS D L  LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

XP_008442807.1 PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo]7.6e-5485.61Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        MPSSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELR+PNKKSSFWVGTFCSPK AA+AYDVVALAIKGES +LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSINDIR MA++TAE FTSSD +M LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

XP_023528801.1 dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pepo]6.0e-5182.48Show/hide
Query:  MPSSSSSSTNDHLPP---PAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSF
        MPSSSSSSTN+HLPP    A  KR+AGRKKFQETRHPIYKGVRQRNGKWVSELR PNK S+FWVGTFCSP+MAAVAYDVVAL IKGESA LNFP   H F
Subjt:  MPSSSSSSTNDHLPP---PAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSF

Query:  PRVMSSSSSINDIRTMAVETAEAFTSSDRLMSLSPLS
        PRV SSSSSINDIRTMAVE AEAFTSS+RL SLS  S
Subjt:  PRVMSSSSSINDIRTMAVETAEAFTSSDRLMSLSPLS

XP_038906080.1 dehydration-responsive element-binding protein 1B-like [Benincasa hispida]7.6e-5486.57Show/hide
Query:  MPSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV
        M SSSSSSTNDHL PPA+VKRRAGR+KFQETRHPI+KGVRQRNGKWVSELRRPNKKSS WVGTFC+PK AAVAYDVVALAIKGESA+LNFP LA+SFPRV
Subjt:  MPSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV

Query:  MSSSSSINDIRTMAVETAEAFTSSDRLMSLSPLS
        M SSS+I+DIRTMA+ETA+AFTSSD L SLSPLS
Subjt:  MSSSSSINDIRTMAVETAEAFTSSDRLMSLSPLS

TrEMBL top hitse value%identityAlignment
A0A140DCV7 CRT/DRE-binding factor 35.9e-5284.09Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        M SSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSFWVGTFCSPK AA+AYDVVALAIKGES  LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSI+DIR MA++TAE FTS D L  LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

A0A1S3B6L0 dehydration-responsive element-binding protein 1F-like3.7e-5485.61Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        MPSSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELR+PNKKSSFWVGTFCSPK AA+AYDVVALAIKGES +LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSINDIR MA++TAE FTSSD +M LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

A0A5D3DNN2 Dehydration-responsive element-binding protein 1F-like3.7e-5485.61Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        MPSSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELR+PNKKSSFWVGTFCSPK AA+AYDVVALAIKGES +LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSINDIR MA++TAE FTSSD +M LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

A0A6J1J762 dehydration-responsive element-binding protein 1B-like6.5e-5182.84Show/hide
Query:  MPSSSSSSTNDHLPP---PAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSF
        MPSSSSSSTN+HLPP    A  KR+AGRKKFQETRHPIYKGVRQRNGKWVSELR PNK S+FWVGTFCSP+MAAVAYDVVAL IKGESA LNFP   H F
Subjt:  MPSSSSSSTNDHLPP---PAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSF

Query:  PRVMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        PRV SSSSSINDIRTMA+E AEAFTSS+RL SLS
Subjt:  PRVMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

I3WEU3 CBF3 protein5.9e-5284.09Show/hide
Query:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR
        M SSSSSSTNDHLPPP  V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSFWVGTFCSPK AA+AYDVVALAIKGES  LNFP  AHSFPR
Subjt:  MPSSSSSSTNDHLPPPAMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPR

Query:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS
        VMSSSSSI+DIR MA++TAE FTS D L  LS
Subjt:  VMSSSSSINDIRTMAVETAEAFTSSDRLMSLS

SwissProt top hitse value%identityAlignment
A2WZI4 Dehydration-responsive element-binding protein 1F8.0e-2247.97Show/hide
Query:  PSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNG--KWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGE-SATLNFPELAHSFP
        PSS     +  LPP    KRRAGRKKF+ETRHP+Y+GVR R G  +WV E+R P  ++  W+GT+ +P+MAA A+DV A+A++GE  A LNFP+   + P
Subjt:  PSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNG--KWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGE-SATLNFPELAHSFP

Query:  RVMSSSSSINDIRTMAVETAEAF
        R  ++S    DIR  A + AE +
Subjt:  RVMSSSSSINDIRTMAVETAEAF

P93835 Dehydration-responsive element-binding protein 1B1.6e-2257.28Show/hide
Query:  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMAVETA
        K+ AGRKKF+ETRHPIY+GVRQRN GKWVSE+R PNKK+  W+GTF + +MAA A+DV ALA++G SA LNF + A      +  S+   DI+  A E A
Subjt:  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMAVETA

Query:  EAF
         AF
Subjt:  EAF

Q39127 Ethylene-responsive transcription factor TINY1.6e-2258.82Show/hide
Query:  RHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMA-----VETAEAFTSSD
        +HP+Y+GVR+RN GKWVSE+R P KKS  W+GTF SP+MAA A+DV AL+IKG SA LNFP+LA SFPR   SS S  DI+  A     +ET+++F+SS 
Subjt:  RHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMA-----VETAEAFTSSD

Query:  RL
         L
Subjt:  RL

Q8S9Z5 Dehydration-responsive element-binding protein 1F8.0e-2247.97Show/hide
Query:  PSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNG--KWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGE-SATLNFPELAHSFP
        PSS     +  LPP    KRRAGRKKF+ETRHP+Y+GVR R G  +WV E+R P  ++  W+GT+ +P+MAA A+DV A+A++GE  A LNFP+   + P
Subjt:  PSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNG--KWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGE-SATLNFPELAHSFP

Query:  RVMSSSSSINDIRTMAVETAEAF
        R  ++S    DIR  A + AE +
Subjt:  RVMSSSSSINDIRTMAVETAEAF

Q9M0L0 Dehydration-responsive element-binding protein 1A1.6e-2252.89Show/hide
Query:  SSSSSTNDHLPPPA--MVKRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV
        SS SS  D++P  A    K+ AGRKKF+ETRHPIY+GVR+RN GKWV E+R PNKK+  W+GTF + +MAA A+DV ALA++G SA LNF + A      
Subjt:  SSSSSTNDHLPPPA--MVKRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV

Query:  MSSSSSINDIRTMAVETAEAF
        +  S+   DI+  A E A AF
Subjt:  MSSSSSINDIRTMAVETAEAF

Arabidopsis top hitse value%identityAlignment
AT4G25480.1 dehydration response element B1A1.1e-2352.89Show/hide
Query:  SSSSSTNDHLPPPA--MVKRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV
        SS SS  D++P  A    K+ AGRKKF+ETRHPIY+GVR+RN GKWV E+R PNKK+  W+GTF + +MAA A+DV ALA++G SA LNF + A      
Subjt:  SSSSSTNDHLPPPA--MVKRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV

Query:  MSSSSSINDIRTMAVETAEAF
        +  S+   DI+  A E A AF
Subjt:  MSSSSSINDIRTMAVETAEAF

AT4G25490.1 C-repeat/DRE binding factor 11.1e-2357.28Show/hide
Query:  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMAVETA
        K+ AGRKKF+ETRHPIY+GVRQRN GKWVSE+R PNKK+  W+GTF + +MAA A+DV ALA++G SA LNF + A      +  S+   DI+  A E A
Subjt:  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMAVETA

Query:  EAF
         AF
Subjt:  EAF

AT5G11590.1 Integrase-type DNA-binding superfamily protein7.4e-2351.67Show/hide
Query:  MPSSSSSSTNDHLPPPAMVKR-RAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFP
        +P+S S S +D        K+ + GR      +HP+Y+GVR RN GKWVSE+R P KKS  W+GTF +P+MAA A+DV AL+IKG +A LNFPELA SFP
Subjt:  MPSSSSSSTNDHLPPPAMVKR-RAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFP

Query:  RVMSSSSSINDIRTMAVETA
        R +S S    DI+T A++ A
Subjt:  RVMSSSSSINDIRTMAVETA

AT5G25810.1 Integrase-type DNA-binding superfamily protein1.1e-2358.82Show/hide
Query:  RHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMA-----VETAEAFTSSD
        +HP+Y+GVR+RN GKWVSE+R P KKS  W+GTF SP+MAA A+DV AL+IKG SA LNFP+LA SFPR   SS S  DI+  A     +ET+++F+SS 
Subjt:  RHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDIRTMA-----VETAEAFTSSD

Query:  RL
         L
Subjt:  RL

AT5G51990.1 C-repeat-binding factor 49.6e-2352.07Show/hide
Query:  PSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV
        P S SS  +  L   +  K+RAGRKKF+ETRHPIY+GVRQRN GKWV E+R PNKKS  W+GTF + +MAA A+DV ALA++G SA LNF + A      
Subjt:  PSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRV

Query:  MSSSSSINDIRTMAVETAEAF
        +  ++   +I+  A E A AF
Subjt:  MSSSSSINDIRTMAVETAEAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTCATCTTCCAGCTCAACCAACGACCACCTTCCGCCGCCGGCGATGGTGAAGCGGAGGGCCGGTAGAAAAAAATTTCAAGAGACCCGCCACCCAATTTACAA
AGGCGTTCGCCAGAGAAATGGTAAATGGGTAAGCGAGCTCCGACGACCTAACAAAAAATCTAGTTTTTGGGTTGGAACTTTTTGTAGCCCAAAAATGGCGGCGGTGGCGT
ATGATGTTGTTGCCTTGGCCATTAAAGGCGAGTCTGCAACACTCAATTTTCCCGAGTTGGCTCACTCATTTCCACGAGTTATGTCGTCGTCGTCATCCATTAACGATATT
CGGACGATGGCAGTTGAGACTGCAGAGGCATTTACGTCAAGCGATAGATTGATGTCTTTGTCTCCACTGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTCATCTTCCAGCTCAACCAACGACCACCTTCCGCCGCCGGCGATGGTGAAGCGGAGGGCCGGTAGAAAAAAATTTCAAGAGACCCGCCACCCAATTTACAA
AGGCGTTCGCCAGAGAAATGGTAAATGGGTAAGCGAGCTCCGACGACCTAACAAAAAATCTAGTTTTTGGGTTGGAACTTTTTGTAGCCCAAAAATGGCGGCGGTGGCGT
ATGATGTTGTTGCCTTGGCCATTAAAGGCGAGTCTGCAACACTCAATTTTCCCGAGTTGGCTCACTCATTTCCACGAGTTATGTCGTCGTCGTCATCCATTAACGATATT
CGGACGATGGCAGTTGAGACTGCAGAGGCATTTACGTCAAGCGATAGATTGATGTCTTTGTCTCCACTGTCATGA
Protein sequenceShow/hide protein sequence
MPSSSSSSTNDHLPPPAMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESATLNFPELAHSFPRVMSSSSSINDI
RTMAVETAEAFTSSDRLMSLSPLS