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HG10020189 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020189
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein CPR30-like
Genome locationChr04:29682533..29682775
RNA-Seq ExpressionHG10020189
SyntenyHG10020189
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580960.1 F-box protein CPR1, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1465.57Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKG
        M+KDEF  VSWSKLLTIGP+ GI+ PL+F++SDELLME   GQ++LY+ +TQQ KELP+ G
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKG

XP_008442746.1 PREDICTED: F-box protein CPR30-like [Cucumis melo]6.4e-1659.49Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF
        MKKDE +VVSWSKLLTI P FGI+ PLLF++ +ELLME + G +I+Y+CKTQ+FK+LP++G+    G ET N+ EAT +
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF

XP_011652842.1 F-box protein CPR1-like [Cucumis sativus]1.2e-1462.5Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDN
        M+K E+ VVSWSKLLTIGP+FGI++P++FL+++ELLME K GQLILY  KTQQ KEL V+ E   W E+  N
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDN

XP_031737581.1 F-box/kelch-repeat protein At3g23880-like [Cucumis sativus]9.2e-1555.7Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF
        M+KDEF  + W KLLTIGP+  I++PLLF++S+ELLME K G+LILY  KT ++KELP+KG +     E  N ++ATFF
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF

XP_038906036.1 F-box protein CPR1-like [Benincasa hispida]2.7e-1470.49Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKG
        M+KDE   VSWSKLLTIGPV GI+ PLLF++SDELLME   GQ+ILY+ +TQQ KE+PVKG
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKG

TrEMBL top hitse value%identityAlignment
A0A1S3B5Y1 F-box protein CPR30-like3.1e-1659.49Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF
        MKKDE +VVSWSKLLTI P FGI+ PLLF++ +ELLME + G +I+Y+CKTQ+FK+LP++G+    G ET N+ EAT +
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF

A0A1S3B6F9 F-box protein CPR30-like1.9e-1362.9Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGE
        MKKDE +VVSWSKLLTI P  GI+ PLLF++S+ELLME   G +I+Y+ KTQ+ K+LP++GE
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGE

A0A5D3DPH7 F-box protein CPR30-like3.1e-1659.49Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF
        MKKDE +VVSWSKLLTI P FGI+ PLLF++ +ELLME + G +I+Y+CKTQ+FK+LP++G+    G ET N+ EAT +
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFF

A0A6J1J5F7 F-box/kelch-repeat protein At3g23880-like4.9e-1461.9Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEK
        M+ DE   VSWSKLLTIGP++GI+ PL+F+ S ELLME  GGQ+ILY+ +TQQF++LP+KG +
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEK

A0A6J1J6Y5 F-box protein CPR1-like2.2e-1465.57Show/hide
Query:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKG
        M+KDEF  VSWSKLLTIGP+ GI+ PL+F++SDELLME   GQ++LY+ + QQ KELP+KG
Subjt:  MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGATGAATTTGCAGTTGTTTCATGGTCGAAGCTATTGACGATTGGCCCTGTTTTTGGAATTCAATTTCCATTGTTGTTTTTAAACTCGGATGAACTTTTAAT
GGAGTACAAAGGAGGACAGTTGATTTTGTATAGCTGTAAAACTCAACAATTCAAAGAGCTCCCGGTTAAAGGAGAAAAATGGGAATGGGGAGAAGAAACGGACAACCAGT
TGGAAGCTACTTTTTTTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGATGAATTTGCAGTTGTTTCATGGTCGAAGCTATTGACGATTGGCCCTGTTTTTGGAATTCAATTTCCATTGTTGTTTTTAAACTCGGATGAACTTTTAAT
GGAGTACAAAGGAGGACAGTTGATTTTGTATAGCTGTAAAACTCAACAATTCAAAGAGCTCCCGGTTAAAGGAGAAAAATGGGAATGGGGAGAAGAAACGGACAACCAGT
TGGAAGCTACTTTTTTTTATTAA
Protein sequenceShow/hide protein sequence
MKKDEFAVVSWSKLLTIGPVFGIQFPLLFLNSDELLMEYKGGQLILYSCKTQQFKELPVKGEKWEWGEETDNQLEATFFY