; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020202 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020202
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSplicing factor 3A subunit 2
Genome locationChr04:29784551..29788737
RNA-Seq ExpressionHG10020202
SyntenyHG10020202
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]4.0e-18398.01Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKTG LLCPS LFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]2.1e-17696.02Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPPIGNNTM NFTPGTQMNRPPMPPPPQGFPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]6.1e-17695.74Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_023005145.1 splicing factor 3A subunit 2 [Cucurbita maxima]1.8e-16792.61Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPP VMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNR PMPPPPQGFPGQG+RQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]6.8e-17595.17Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRP+PPPPQAP PPPPPPQQG PPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNRPPMPPPPQGFPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein1.0e-17696.02Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPPIGNNTM NFTPGTQMNRPPMPPPPQGFPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 23.0e-17695.74Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 21.9e-18398.01Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKTG LLCPS LFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 23.0e-17695.74Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPPSVMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 28.7e-16892.61Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRV PPPPMPGSLPPPP VMANGPPRPMPPGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGGA

Query:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        PPIPPPPP+GNNTM NFTPGTQMNR PMPPPPQGFPGQG+RQ PPPPPPNMG
Subjt:  PPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 21.7e-7554.69Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH
        K           KIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++H
Subjt:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH

Query:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSV--MA
        W+ ++K F LQ +FK +   A           K PP P  NG  P    P  LPPPP    P PP P  G  P  PP     PPP PG  PP P V   A
Subjt:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSV--MA

Query:  NG--PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPPNMG
        +G  PP P     AP + PP P+ +       P      PP P   PP  G   P  G+  P P   PPP+ G
Subjt:  NG--PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPPNMG

Q15428 Splicing factor 3A subunit 24.4e-7654.96Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH
        K           KIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++H
Subjt:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH

Query:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSV--MA
        W+ ++K F LQ +FK +   A           K PP P  NG  P    P  LPPPP    P PP P  G  P  PP     PPP PG  PP P V   A
Subjt:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSV--MA

Query:  NG--PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPPNMG
        +G  PP P     AP + PP P  +       P      PP P   PP  G   P  G+  P P   PPP+ G
Subjt:  NG--PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPPNMG

Q54B65 Splicing factor 3A subunit 28.6e-6458.74Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST-
        +V  +KT          KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK+P+ EID++T 
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST-

Query:  --PKFFSHWDPDSKMFTLQLYFK
           KFF+HWD  +K FTLQLYFK
Subjt:  --PKFFSHWDPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 26.8e-6953.12Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH
        K           KIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF   
Subjt:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH

Query:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSVMANG
               F LQ +FK +   A           K PP P  NG  P    P  LPPPP    P PP P  G  P  PP     PPP PG  PP P V    
Subjt:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSVMANG

Query:  PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM
        PP       AP + PP P+ +       P      PP P   PP  G   P  G+  P P   PP P +
Subjt:  PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM

Q6AXT8 Splicing factor 3A subunit 26.4e-7554.2Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH
        K           KIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++H
Subjt:  KTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSH

Query:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSVMANG
        W+ ++K F LQ +FK +   A           K PP P  NG  P    P  LPPPP    P PP P  G  P  PP     PPP PG  PP P V    
Subjt:  WDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPP-----PPPMPGSLPPPPSVMANG

Query:  PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM
        PP       AP + PP P+ +       P      PP P   PP  G   P  G+  P P   PP P +
Subjt:  PPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein1.2e-11375.92Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
         VSVR+T          KIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFKVPSTE+DKSTP
Subjt:  KVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGG
        KFFSHWDPDSKMFTLQ+YFK    E NKP     ANG                 PPPPPPPP Q      PPPPP  G  PPPP  MAN   RPMPP G
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPPPPSVMANGPPRPMPPGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGACCGTACAGAATTTTCACTTCGGCGATTCGCTTAGATAAACAGAGAAAGGGGTTTTTAGGTCGCCGGAAGGACGAAGAAGCTTTGTCAGTCGGAAATCGGGA
TCCGGTCAAGAAGCAACGCCGAAGTTTGACGGCGATGGATAGAGAGTGGGGTTCGAAGCCGGGAAGTGGAGGTGCGGCCTCTGCACAAAATGAAGCTATCGATCGCAGAG
AGCGTCTTCGACGGCTGGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTATTTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAAC
AATGAGGGTAATTACTTGGCGCACACGCAGGGGAAGCGGCATCAGACTAATTTGGCTAAGAGAGCTGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAA
GCGGAAGGTCTCTGTTCGCAAAACAGGCAAGCTTTTATGCCCTTCTCTTTTATTTAAAATTGGAAGGCCTGGTTATCGAGTTACAAAGCAATTTGATTCTGAGACAAAGC
AGAGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGTTTTATGTCCTCTTATGAGCAGCGTGTGCAACCTTTTGACAAAAGA
TACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATCGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCGACCCCAAAATTCTTCTCACACTGGGATCCGGA
CTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCAAACAAGCCACCACCTGTGCCTGCAGCCAATGGAACAGTGCCATCTGGTGCACCACCAA
GGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCACCACCTCCGCCCCAGCAAGGAGCACCACCTAGAGTTCCTCCTCCTCCTCCGATGCCTGGGTCCTTGCCGCCT
CCCCCTTCTGTTATGGCCAACGGTCCTCCTAGGCCAATGCCTCCTGGCGGGGCTCCGCCCATCCCTCCGCCACCTCCAATTGGTAATAACACAATGGTGAATTTCACTCC
TGGTACTCAGATGAATAGACCTCCCATGCCGCCTCCCCCACAGGGCTTCCCAGGTCAGGGTATCCGGCAGCCGCCACCACCACCACCACCCAATATGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAGACCGTACAGAATTTTCACTTCGGCGATTCGCTTAGATAAACAGAGAAAGGGGTTTTTAGGTCGCCGGAAGGACGAAGAAGCTTTGTCAGTCGGAAATCGGGA
TCCGGTCAAGAAGCAACGCCGAAGTTTGACGGCGATGGATAGAGAGTGGGGTTCGAAGCCGGGAAGTGGAGGTGCGGCCTCTGCACAAAATGAAGCTATCGATCGCAGAG
AGCGTCTTCGACGGCTGGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTATTTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAAC
AATGAGGGTAATTACTTGGCGCACACGCAGGGGAAGCGGCATCAGACTAATTTGGCTAAGAGAGCTGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAA
GCGGAAGGTCTCTGTTCGCAAAACAGGCAAGCTTTTATGCCCTTCTCTTTTATTTAAAATTGGAAGGCCTGGTTATCGAGTTACAAAGCAATTTGATTCTGAGACAAAGC
AGAGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGTTTTATGTCCTCTTATGAGCAGCGTGTGCAACCTTTTGACAAAAGA
TACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATCGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCGACCCCAAAATTCTTCTCACACTGGGATCCGGA
CTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCAAACAAGCCACCACCTGTGCCTGCAGCCAATGGAACAGTGCCATCTGGTGCACCACCAA
GGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCACCACCTCCGCCCCAGCAAGGAGCACCACCTAGAGTTCCTCCTCCTCCTCCGATGCCTGGGTCCTTGCCGCCT
CCCCCTTCTGTTATGGCCAACGGTCCTCCTAGGCCAATGCCTCCTGGCGGGGCTCCGCCCATCCCTCCGCCACCTCCAATTGGTAATAACACAATGGTGAATTTCACTCC
TGGTACTCAGATGAATAGACCTCCCATGCCGCCTCCCCCACAGGGCTTCCCAGGTCAGGGTATCCGGCAGCCGCCACCACCACCACCACCCAATATGGGATAG
Protein sequenceShow/hide protein sequence
MIRPYRIFTSAIRLDKQRKGFLGRRKDEEALSVGNRDPVKKQRRSLTAMDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHN
NEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTGKLLCPSLLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKR
YQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPPMPGSLPP
PPSVMANGPPRPMPPGGAPPIPPPPPIGNNTMVNFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG