; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020216 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020216
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationChr04:29902356..29911454
RNA-Seq ExpressionHG10020216
SyntenyHG10020216
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH26635.1 putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]1.1e-4492.93Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FFF LLLLISP   AAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVIT+FY+
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

KAG6580623.1 putative xyloglucan endotransglucosylase/hydrolase protein 32, partial [Cucurbita argyrosperma subsp. sororia]6.3e-6745.7Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY--
        FFFLLLLL+SPA AAAASWPPSPGFWPST  RSMEFYKGFRNLWGPQHQSLSQ+TLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVITAFY  
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY--

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------VCLACLLPLFL
                                                                                                 VCLACLLPLFL
Subjt:  -----------------------------------------------------------------------------------------VCLACLLPLFL

Query:  IPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPLAGQQHPPPKAVDAVDEKQD
        IPVVNALP+LF LIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPL GQQ PPPK VDAVDEKQD
Subjt:  IPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPLAGQQHPPPKAVDAVDEKQD

XP_004137842.1 probable xyloglucan endotransglucosylase/hydrolase protein 32 [Cucumis sativus]3.9e-4593.94Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FFFLLLLLISP   AAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVIT+FY+
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

XP_022935114.1 probable xyloglucan endotransglucosylase/hydrolase protein 32 [Cucurbita moschata]2.6e-4492.93Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FFFLLLLL+SPA AAAASWPPSPGFWPST  RSMEFYKGFRNLWGPQHQSLSQ+TLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVITAFY+
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

XP_038905376.1 probable xyloglucan endotransglucosylase/hydrolase protein 32 [Benincasa hispida]3.0e-4594.12Show/hide
Query:  MAFFF-LLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAF
        MAFFF LLLLLISP   AAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVIT+F
Subjt:  MAFFF-LLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAF

Query:  YV
        Y+
Subjt:  YV

TrEMBL top hitse value%identityAlignment
A0A0A0LE67 Xyloglucan endotransglucosylase/hydrolase1.9e-4593.94Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FFFLLLLLISP   AAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVIT+FY+
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

A0A1S3B6D2 Xyloglucan endotransglucosylase/hydrolase4.7e-4489.52Show/hide
Query:  MAFF----FLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVI
        MAFF     LLLLLISP    AASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVI
Subjt:  MAFF----FLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVI

Query:  TAFYV
        T+FY+
Subjt:  TAFYV

A0A5A7TQ87 Xyloglucan endotransglucosylase/hydrolase4.7e-4489.52Show/hide
Query:  MAFF----FLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVI
        MAFF     LLLLLISP    AASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVI
Subjt:  MAFF----FLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVI

Query:  TAFYV
        T+FY+
Subjt:  TAFYV

A0A6J1F4G9 Xyloglucan endotransglucosylase/hydrolase1.2e-4492.93Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FFFLLLLL+SPA AAAASWPPSPGFWPST  RSMEFYKGFRNLWGPQHQSLSQ+TLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVITAFY+
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

N0DX89 Xyloglucan endotransglucosylase/hydrolase5.6e-4592.93Show/hide
Query:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FFF LLLLISP   AAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYF ASIKLQPGYTAGVIT+FY+
Subjt:  FFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

SwissProt top hitse value%identityAlignment
P93046 Xyloglucan endotransglucosylase/hydrolase protein 311.2e-2554.46Show/hide
Query:  MAFFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY
        ++  FL LL++ P++  +    PSPG++PS+R  +  F + FR LWG QHQ   Q+ +++WLD++TGSGFKSLRP+RSGYFGASIKLQPG+TAGV T+ Y
Subjt:  MAFFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY

Query:  V
        +
Subjt:  V

P93349 Probable xyloglucan endotransglucosylase/hydrolase protein1.9e-0536.36Show/hide
Query:  FYKGFRNLWGPQHQSL--SQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        F+K +   W   H       +T+ + LDR++G+GF+S + +  G+F   +KL  G +AGV+TAFY+
Subjt:  FYKGFRNLWGPQHQSL--SQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

Q38908 Probable xyloglucan endotransglucosylase/hydrolase protein 301.1e-0538.89Show/hide
Query:  TRFRSMEFYKGFRNLWGPQHQSLSQNTLSI--WLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY
        T   ++ F +    L+G  +   S + LS+   LDR TGSGF S   ++ G++ + IKL   YTAGV+ AFY
Subjt:  TRFRSMEFYKGFRNLWGPQHQSLSQNTLSI--WLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY

Q9FKL9 Probable xyloglucan endotransglucosylase/hydrolase protein 122.4e-0539.39Show/hide
Query:  FYKGFRNLWGPQHQSL--SQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        FY  F   WG    ++  S   L+  LD+T+GSGF+S + +  G     IKL PG +AG +TA+Y+
Subjt:  FYKGFRNLWGPQHQSL--SQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

Q9SJL9 Probable xyloglucan endotransglucosylase/hydrolase protein 322.3e-3569.89Show/hide
Query:  LLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        LL+   ++  A WPPSPG+WPS++  S+ FYKGFRNLWGPQHQ + QN L+IWLDRT+GSGFKS++PFRSGYFGA+IKLQPGYTAGVIT+ Y+
Subjt:  LLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

Arabidopsis top hitse value%identityAlignment
AT1G32170.1 xyloglucan endotransglucosylase/hydrolase 307.8e-0738.89Show/hide
Query:  TRFRSMEFYKGFRNLWGPQHQSLSQNTLSI--WLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY
        T   ++ F +    L+G  +   S + LS+   LDR TGSGF S   ++ G++ + IKL   YTAGV+ AFY
Subjt:  TRFRSMEFYKGFRNLWGPQHQSLSQNTLSI--WLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY

AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 321.6e-3669.89Show/hide
Query:  LLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        LL+   ++  A WPPSPG+WPS++  S+ FYKGFRNLWGPQHQ + QN L+IWLDRT+GSGFKS++PFRSGYFGA+IKLQPGYTAGVIT+ Y+
Subjt:  LLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

AT2G36870.2 xyloglucan endotransglucosylase/hydrolase 321.6e-3669.89Show/hide
Query:  LLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV
        LL+   ++  A WPPSPG+WPS++  S+ FYKGFRNLWGPQHQ + QN L+IWLDRT+GSGFKS++PFRSGYFGA+IKLQPGYTAGVIT+ Y+
Subjt:  LLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYV

AT3G44990.1 xyloglucan endo-transglycosylase-related 88.8e-2754.46Show/hide
Query:  MAFFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY
        ++  FL LL++ P++  +    PSPG++PS+R  +  F + FR LWG QHQ   Q+ +++WLD++TGSGFKSLRP+RSGYFGASIKLQPG+TAGV T+ Y
Subjt:  MAFFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFY

Query:  V
        +
Subjt:  V

AT5G03460.1 unknown protein5.0e-1447.06Show/hide
Query:  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPLAGQQ
        VC+ CL+PLFL+P++N +P +    M K+Y   GWEYRKP RVPPACP++P AK ++  ++    G +
Subjt:  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPLAGQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTTCTTTCTCCTCCTCCTCCTCATTTCCCCTGCCACCGCCGCCGCCGCCTCCTGGCCTCCCTCCCCCGGCTTCTGGCCGAGCACCCGCTTCCGCTCCATGGA
ATTCTACAAAGGCTTCCGCAACCTCTGGGGCCCTCAGCATCAAAGCCTCTCCCAAAACACCCTTTCCATTTGGCTTGATCGTACCACCGGCAGCGGCTTCAAGTCCCTCC
GCCCTTTCCGATCCGGCTACTTCGGCGCCTCCATCAAACTCCAACCCGGCTACACCGCCGGCGTCATCACCGCCTTCTATGTTTGCTTGGCGTGTCTCTTGCCTCTGTTT
CTCATTCCAGTCGTCAACGCGCTGCCTGTTCTATTCTATTTAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATATAGAAAACCACAGAGGGTACCGCCGGCTTG
TCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGGAGTTAGAACCTCTAGCTGGTCAGCAACACCCACCTCCAAAAGCTGTGGATGCCGTGGATGAGAAGCAAGACT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCTTCTTTCTCCTCCTCCTCCTCATTTCCCCTGCCACCGCCGCCGCCGCCTCCTGGCCTCCCTCCCCCGGCTTCTGGCCGAGCACCCGCTTCCGCTCCATGGA
ATTCTACAAAGGCTTCCGCAACCTCTGGGGCCCTCAGCATCAAAGCCTCTCCCAAAACACCCTTTCCATTTGGCTTGATCGTACCACCGGCAGCGGCTTCAAGTCCCTCC
GCCCTTTCCGATCCGGCTACTTCGGCGCCTCCATCAAACTCCAACCCGGCTACACCGCCGGCGTCATCACCGCCTTCTATGTTTGCTTGGCGTGTCTCTTGCCTCTGTTT
CTCATTCCAGTCGTCAACGCGCTGCCTGTTCTATTCTATTTAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATATAGAAAACCACAGAGGGTACCGCCGGCTTG
TCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGGAGTTAGAACCTCTAGCTGGTCAGCAACACCCACCTCCAAAAGCTGTGGATGCCGTGGATGAGAAGCAAGACT
GA
Protein sequenceShow/hide protein sequence
MAFFFLLLLLISPATAAAASWPPSPGFWPSTRFRSMEFYKGFRNLWGPQHQSLSQNTLSIWLDRTTGSGFKSLRPFRSGYFGASIKLQPGYTAGVITAFYVCLACLLPLF
LIPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPLAGQQHPPPKAVDAVDEKQD