; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020223 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020223
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionActin T1-like protein
Genome locationChr04:30022844..30023143
RNA-Seq ExpressionHG10020223
SyntenyHG10020223
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAF23250.1 unknown protein [Arabidopsis thaliana]2.3e-2369.66Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLLHYSVVIVLMFNFCSN
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQFKY  LS S +  NS +   F F    S +  L   FCS+
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLLHYSVVIVLMFNFCSN

CAD5322558.1 unnamed protein product [Arabidopsis thaliana]2.3e-2385.94Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNS
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQFKY  LS S +  NS
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNS

KAA0043996.1 hypothetical protein E6C27_scaffold236G003420 [Cucumis melo var. makuwa]1.8e-2871.28Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKY----SFLSFSGKC----------LNSCSALQFAFLLHYSVVI
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFKY     FLSF  KC          LN+CS+LQF+FLLHY VV+
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKY----SFLSFSGKC----------LNSCSALQFAFLLHYSVVI

MBA0588026.1 hypothetical protein [Gossypium raimondii]1.1e-2272.97Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLL
        MEKYFGNAYRGDPGVPHA PDRFVNIWIGSAAFSVLTWFNPYMWQL+NQFK+  L ++    N      F F+L
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLL

MBA0615779.1 hypothetical protein [Gossypium davidsonii]6.7e-2394.44Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSF
        MEKYFGNAYRGDPGVPHA PDRFVNIWIGSAAFSVLTWFNPYMWQL+NQFK SF
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSF

TrEMBL top hitse value%identityAlignment
A0A5D3DNH7 Uncharacterized protein8.8e-2971.28Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKY----SFLSFSGKC----------LNSCSALQFAFLLHYSVVI
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFKY     FLSF  KC          LN+CS+LQF+FLLHY VV+
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKY----SFLSFSGKC----------LNSCSALQFAFLLHYSVVI

A0A7G2EL77 (thale cress) hypothetical protein1.1e-2385.94Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNS
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQFKY  LS S +  NS
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNS

A0A7J8RPJ2 Uncharacterized protein3.2e-2394.44Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSF
        MEKYFGNAYRGDPGVPHA PDRFVNIWIGSAAFSVLTWFNPYMWQL+NQFK SF
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSF

A0A7J8UL78 Uncharacterized protein3.2e-2394.44Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSF
        MEKYFGNAYRGDPGVPHA PDRFVNIWIGSAAFSVLTWFNPYMWQL+NQFK SF
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSF

Q9SF88 F8A24.9 protein1.1e-2369.66Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLLHYSVVIVLMFNFCSN
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQFKY  LS S +  NS +   F F    S +  L   FCS+
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLLHYSVVIVLMFNFCSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09860.1 unknown protein1.2e-2594.23Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKY
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQF Y
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACGCCGACCCAGATCGTTTCGTCAACATTTGGATTGGATCCGCCGCCTTCTCCGTTCTCAC
ATGGTTCAATCCTTACATGTGGCAACTCTCCAATCAGTTCAAGTACTCGTTTCTTTCTTTCTCAGGGAAATGTTTGAATTCGTGTTCTGCTCTGCAATTCGCCTTCCTGC
TTCATTACTCTGTTGTTATAGTACTGATGTTCAATTTCTGTAGCAATAGCTTCACATTCTTTTTGGTGGGTCGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACGCCGACCCAGATCGTTTCGTCAACATTTGGATTGGATCCGCCGCCTTCTCCGTTCTCAC
ATGGTTCAATCCTTACATGTGGCAACTCTCCAATCAGTTCAAGTACTCGTTTCTTTCTTTCTCAGGGAAATGTTTGAATTCGTGTTCTGCTCTGCAATTCGCCTTCCTGC
TTCATTACTCTGTTGTTATAGTACTGATGTTCAATTTCTGTAGCAATAGCTTCACATTCTTTTTGGTGGGTCGGTTTTGA
Protein sequenceShow/hide protein sequence
MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFKYSFLSFSGKCLNSCSALQFAFLLHYSVVIVLMFNFCSNSFTFFLVGRF