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HG10020261 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020261
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLow temperature-induced protein
Genome locationChr04:30323192..30323955
RNA-Seq ExpressionHG10020261
SyntenyHG10020261
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137807.1 low temperature-induced protein lt101.2 [Cucumis sativus]1.3e-2094.64Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGY+PGI+YAVYVL+GTR
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

XP_008442650.1 PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo]1.3e-2094.64Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGY+PGIVYAVYVL+GTR
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

XP_022145681.1 low temperature-induced protein lt101.2-like [Momordica charantia]1.1e-1787.5Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATF+EVLLA+FIPP+GVFLRYGIGIEFWI L+LTF GYLPGIVYAVYVLVG R
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

XP_022945600.1 low temperature-induced protein lt101.2-like [Cucurbita moschata]3.7e-1888.89Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG
        MGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GYLPGI+YAVYVLVG
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG

XP_038906189.1 low temperature-induced protein lt101.2-like [Benincasa hispida]6.7e-2094.64Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATFIEVLLAIFIPP+GVFLRYGIGIEFWIDLVLT FGYLPGI+YAVYVLVGTR
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

TrEMBL top hitse value%identityAlignment
A0A0A0LAU7 Uncharacterized protein6.5e-2194.64Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGY+PGI+YAVYVL+GTR
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

A0A1S3B667 low temperature-induced protein lt101.2-like6.5e-2194.64Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGY+PGIVYAVYVL+GTR
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

A0A6J1CX15 low temperature-induced protein lt101.2-like5.2e-1887.5Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR
        MGSATF+EVLLA+FIPP+GVFLRYGIGIEFWI L+LTF GYLPGIVYAVYVLVG R
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR

A0A6J1G1E1 low temperature-induced protein lt101.2-like1.8e-1888.89Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG
        MGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GYLPGI+YAVYVLVG
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG

A0A6J1KU26 low temperature-induced protein lt101.2-like1.8e-1888.89Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG
        MGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GYLPGI+YAVYVLVG
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI33.0e-1573.58Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLV
        MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GY+PGI+YAVYVLV
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLV

P68179 Low temperature-induced protein lt101.13.0e-1573.58Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLV
        MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GY+PGI+YAVYVLV
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLV

Q9ARD5 Low temperature-induced protein lt101.27.9e-1675.47Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLV
        M SATFIEV+LAI +PPVGVFLRYG+ +EFWI L+LT  GY+PGI+YAVYVLV
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLV

Q9FE70 UPF0057 membrane protein At1g575501.7e-1369.23Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL
        MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F ++PG++YA+YVL
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL

Q9ZNQ7 Hydrophobic protein RCI2A4.4e-1463.46Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL
        M +ATF+++++AI +PP+GVFLR+G G+EFWI LVLT  GY+PGI+YA+YVL
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.2e-1469.23Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL
        MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F ++PG++YA+YVL
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL

AT2G24040.1 Low temperature and salt responsive protein family1.4e-0756.52Show/hide
Query:  EVLLAIFIPPVGVFLRYG-IGIEFWIDLVLTFFGYLPGIVYAVYVL
        E+ +AI +PPVGV LR+G   +EF+I L+LT  GYLPGI+YA+Y +
Subjt:  EVLLAIFIPPVGVFLRYG-IGIEFWIDLVLTFFGYLPGIVYAVYVL

AT2G38905.1 Low temperature and salt responsive protein family8.7e-1872.22Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG
        MGS TF+E++LAI +PPVGVFLRYG G+EFWI L+LT  GY+PGI+YA+YVLVG
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVG

AT3G05880.1 Low temperature and salt responsive protein family3.1e-1563.46Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL
        M +ATF+++++AI +PP+GVFLR+G G+EFWI LVLT  GY+PGI+YA+YVL
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL

AT3G05890.1 Low temperature and salt responsive protein family1.5e-1461.54Show/hide
Query:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL
        M +ATF+E++LAI +PP+GVFL++G  +EFWI L+LT FGYLPGI+YA+Y++
Subjt:  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTGCCACCTTCATCGAAGTGCTTCTCGCCATCTTCATTCCTCCCGTCGGCGTCTTCCTTCGCTATGGCATTGGGATCGAGTTTTGGATTGATTTGGTGCTCAC
ATTTTTCGGATATCTTCCTGGAATTGTTTACGCCGTTTATGTCTTGGTTGGAACGCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCTGCCACCTTCATCGAAGTGCTTCTCGCCATCTTCATTCCTCCCGTCGGCGTCTTCCTTCGCTATGGCATTGGGATCGAGTTTTGGATTGATTTGGTGCTCAC
ATTTTTCGGATATCTTCCTGGAATTGTTTACGCCGTTTATGTCTTGGTTGGAACGCGATGA
Protein sequenceShow/hide protein sequence
MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYLPGIVYAVYVLVGTR