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HG10020275 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020275
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationChr04:30484312..30485157
RNA-Seq ExpressionHG10020275
SyntenyHG10020275
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017329.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-6080.86Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSEN+LPGPK  LP++LG AAA NGQVDQHQNRRS           + TKEG ESQRA + R  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLSMATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]4.8e-6588.74Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF EELSEN+LPGPK TLP+D G  AA NG VDQHQNR SS TKEGIESQ +AV RIPE HASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFA +L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]4.5e-6387.42Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFT+ELS+N+LPGPK TLP+  G AAA NG VDQHQNRRS  TKEGIESQ +AV RIPE HASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        IDSVCGPDEMAKAEELKRKARAERFELLTLS+ATDEEAKKKARLARFA  L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]2.7e-6080.86Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF+EELSEN+LPGPK  LP++LG AAA NGQVDQHQNRRS           + TKEG ESQRAA+ R  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLSMATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]9.1e-6488.89Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSST--TKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
        MAT+FTEELSEN+LPGPK TLP++LGFAAA NGQVDQHQNRRSS   TKE IESQ AAV RIPE H SVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSST--TKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER

Query:  FGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        FGIDSVCGPDEM KAEELKRKARAERFELLTLSMAT EEAKKKARLARFA FL
Subjt:  FGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein2.2e-6387.42Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFT+ELS+N+LPGPK TLP+  G AAA NG VDQHQNRRS  TKEGIESQ +AV RIPE HASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        IDSVCGPDEMAKAEELKRKARAERFELLTLS+ATDEEAKKKARLARFA  L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X12.3e-6588.74Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF EELSEN+LPGPK TLP+D G  AA NG VDQHQNR SS TKEGIESQ +AV RIPE HASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFA +L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X12.3e-6588.74Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF EELSEN+LPGPK TLP+D G  AA NG VDQHQNR SS TKEGIESQ +AV RIPE HASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFA +L
Subjt:  IDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like3.9e-6080.25Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSEN+LPGPK  LP++LG AAA NGQVDQHQNRRS           + TKEG ESQRA + R  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLS+ATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

A0A6J1J7D8 protein MODIFIER OF SNC1 11-like8.6e-6079.63Show/hide
Query:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSEN+LPGPK  LP++LG AAA NGQVDQHQNRR+           + TKEG ES+RA + R  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRS-----------STTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLSMATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 111.9e-1663.22Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELLTLSMATD---EEAKKKARLARF
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEAKKKARLARF
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELLTLSMATD---EEAKKKARLARF

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein1.4e-1763.22Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELLTLSMATD---EEAKKKARLARF
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEAKKKARLARF
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELLTLSMATD---EEAKKKARLARF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGATTTCACAGAAGAACTGAGCGAAAACTCTCTTCCAGGACCGAAACCAACCCTACCAATAGATTTAGGATTCGCAGCCGCTTGTAATGGCCAAGTAGATCA
ACACCAAAATCGCCGTTCCTCCACTACAAAGGAAGGTATTGAATCTCAACGTGCCGCCGTGAGGAGAATACCGGAATGTCATGCTTCTGTTTTTGATATCTTCAAGAAGA
TCCGTCGTGCGGAGCGGTTCGGGATTCCCGTACGTTTGTCGGAGGCAGAAAAGCGATTCTCTCGAGCTGAGAGGTTCGGCATTGATTCAGTGTGTGGACCGGATGAAATG
GCCAAAGCAGAGGAACTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCTTAACTTTGTCTATGGCTACTGACGAGGAGGCAAAGAAGAAAGCTCGGCTTGCTAGATT
TGCCTCGTTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCGATTTCACAGAAGAACTGAGCGAAAACTCTCTTCCAGGACCGAAACCAACCCTACCAATAGATTTAGGATTCGCAGCCGCTTGTAATGGCCAAGTAGATCA
ACACCAAAATCGCCGTTCCTCCACTACAAAGGAAGGTATTGAATCTCAACGTGCCGCCGTGAGGAGAATACCGGAATGTCATGCTTCTGTTTTTGATATCTTCAAGAAGA
TCCGTCGTGCGGAGCGGTTCGGGATTCCCGTACGTTTGTCGGAGGCAGAAAAGCGATTCTCTCGAGCTGAGAGGTTCGGCATTGATTCAGTGTGTGGACCGGATGAAATG
GCCAAAGCAGAGGAACTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCTTAACTTTGTCTATGGCTACTGACGAGGAGGCAAAGAAGAAAGCTCGGCTTGCTAGATT
TGCCTCGTTTTTATAG
Protein sequenceShow/hide protein sequence
MATDFTEELSENSLPGPKPTLPIDLGFAAACNGQVDQHQNRRSSTTKEGIESQRAAVRRIPECHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPDEM
AKAEELKRKARAERFELLTLSMATDEEAKKKARLARFASFL