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HG10020281 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020281
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSCP domain-containing protein
Genome locationChr04:30516541..30516819
RNA-Seq ExpressionHG10020281
SyntenyHG10020281
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044057.1 pathogenesis-related protein 1C-like [Cucumis melo var. makuwa]6.7e-0944.33Show/hide
Query:  MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNS-----IGFSSSTVTWDRNLTRFARRWGEKRAADCK
        MS PY+ SA  + S  L+LHLA AGVQ Q P  SA +     T    A P R N+ +    +       F    +TWD+NLTR+A RWGEKRA DC+
Subjt:  MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNS-----IGFSSSTVTWDRNLTRFARRWGEKRAADCK
TrEMBL top hitse value%identityAlignment
A0A0A0LDA7 SCP domain-containing protein1.3e-1048.45Show/hide
Query:  MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNS-----IGFSSSTVTWDRNLTRFARRWGEKRAADCK
        MS PY+ S  AA S  LLLHLA AGVQ Q P  S   T +   P   A P R ++ +    +       F    +TWDRNLTRFARRWGE+RAADC+
Subjt:  MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNS-----IGFSSSTVTWDRNLTRFARRWGEKRAADCK
A0A5A7TQF4 Pathogenesis-related protein 1C-like3.2e-0944.33Show/hide
Query:  MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNS-----IGFSSSTVTWDRNLTRFARRWGEKRAADCK
        MS PY+ SA  + S  L+LHLA AGVQ Q P  SA +     T    A P R N+ +    +       F    +TWD+NLTR+A RWGEKRA DC+
Subjt:  MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNS-----IGFSSSTVTWDRNLTRFARRWGEKRAADCK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCGCCCTACATGTTCTCCGCCGTCGCCGCCCTCTCCCTCTTCCTCCTTCTCCATCTCGCCGCCGCCGGCGTCCAACAACAGCCTCCGCTCGCCTCCGCTCCACA
AACGCGACGACTCCAGACGCCCGTCCTCGACGCCGATCCTACACGCGCGAATTTCTTCAAGCGCACAACAAATTCGATCGGCTTTTCAAGTTCCACCGTAACGTGGGACA
GGAATCTCACTCGATTCGCGCGGCGGTGGGGCGAGAAACGCGCCGCGGATTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCGCCCTACATGTTCTCCGCCGTCGCCGCCCTCTCCCTCTTCCTCCTTCTCCATCTCGCCGCCGCCGGCGTCCAACAACAGCCTCCGCTCGCCTCCGCTCCACA
AACGCGACGACTCCAGACGCCCGTCCTCGACGCCGATCCTACACGCGCGAATTTCTTCAAGCGCACAACAAATTCGATCGGCTTTTCAAGTTCCACCGTAACGTGGGACA
GGAATCTCACTCGATTCGCGCGGCGGTGGGGCGAGAAACGCGCCGCGGATTGTAAATGA
Protein sequenceShow/hide protein sequence
MSPPYMFSAVAALSLFLLLHLAAAGVQQQPPLASAPQTRRLQTPVLDADPTRANFFKRTTNSIGFSSSTVTWDRNLTRFARRWGEKRAADCK