; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020284 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020284
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:30576175..30576657
RNA-Seq ExpressionHG10020284
SyntenyHG10020284
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RAL50628.1 hypothetical protein DM860_015775 [Cuscuta australis]3.4e-0844Show/hide
Query:  TGDNNPQPPAPNTDGDSAPCFTKSIYPR--PRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVFESF
        +GD+N  PP PN      P    +I  R   RN      T R RS + R   RGA   +  L DEE G N+NA K++Q+PL S+EIV+GSG+RS VF+ F
Subjt:  TGDNNPQPPAPNTDGDSAPCFTKSIYPR--PRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVFESF

Query:  WGIWRCWSRRNLFISPVIDAGLLME
         G+ R  + R   IS VI A LLM+
Subjt:  WGIWRCWSRRNLFISPVIDAGLLME
VFQ85853.1 unnamed protein product [Cuscuta campestris]5.8e-0842.97Show/hide
Query:  TGDNNPQPPAPN-----TDGDSAPCFTKSIYPRPRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVF
        +GD+N  PP PN      D  + P  T  +  R RN      T R RS + R    GA   +  L DEE G N+NA K++Q+PL SEEIV+GSG+RS VF
Subjt:  TGDNNPQPPAPN-----TDGDSAPCFTKSIYPRPRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVF

Query:  ESFWGIWRCWSRRNLFISPVIDAGLLME
        + F G+ R  + R   IS VI A LL++
Subjt:  ESFWGIWRCWSRRNLFISPVIDAGLLME
TrEMBL top hitse value%identityAlignment
A0A328E1H2 Uncharacterized protein1.6e-0844Show/hide
Query:  TGDNNPQPPAPNTDGDSAPCFTKSIYPR--PRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVFESF
        +GD+N  PP PN      P    +I  R   RN      T R RS + R   RGA   +  L DEE G N+NA K++Q+PL S+EIV+GSG+RS VF+ F
Subjt:  TGDNNPQPPAPNTDGDSAPCFTKSIYPR--PRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVFESF

Query:  WGIWRCWSRRNLFISPVIDAGLLME
         G+ R  + R   IS VI A LLM+
Subjt:  WGIWRCWSRRNLFISPVIDAGLLME
A0A484MAB2 Uncharacterized protein2.8e-0842.97Show/hide
Query:  TGDNNPQPPAPN-----TDGDSAPCFTKSIYPRPRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVF
        +GD+N  PP PN      D  + P  T  +  R RN      T R RS + R    GA   +  L DEE G N+NA K++Q+PL SEEIV+GSG+RS VF
Subjt:  TGDNNPQPPAPN-----TDGDSAPCFTKSIYPRPRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVF

Query:  ESFWGIWRCWSRRNLFISPVIDAGLLME
        + F G+ R  + R   IS VI A LL++
Subjt:  ESFWGIWRCWSRRNLFISPVIDAGLLME
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCTACAAATCCAGCTCCACCGGTGACAACAATCCTCAACCTCCGGCGCCCAATACCGACGGGGACTCTGCCCCCTGTTTTACCAAATCCATATATCCCCGACC
CCGAAACCTGCTCCGTGCTCGTCAAACCTGTAGAAAACGATCTGCGAATTGCAGAACCAGCTTCAGAGGGGCCAATACGGGACAACGAAGGCTGAAAGATGAAGAAGGTG
GAACCAATCAAAATGCCGACAAAAACAAACAGAAGCCTCTGCTCTCTGAAGAGATAGTTAATGGATCTGGGGAGAGATCTGGGGTGTTTGAGAGCTTTTGGGGAATATGG
CGATGTTGGAGCCGGCGGAACCTCTTCATCTCGCCGGTGATTGATGCTGGATTGCTTATGGAGCTGTTTGATGCTCTGCATTGCTGTGTGATGGGTTGTTTGAGATTTGA
TTCACCGCAGCTTCTGAACGTTGTCACAGATCAAGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCTACAAATCCAGCTCCACCGGTGACAACAATCCTCAACCTCCGGCGCCCAATACCGACGGGGACTCTGCCCCCTGTTTTACCAAATCCATATATCCCCGACC
CCGAAACCTGCTCCGTGCTCGTCAAACCTGTAGAAAACGATCTGCGAATTGCAGAACCAGCTTCAGAGGGGCCAATACGGGACAACGAAGGCTGAAAGATGAAGAAGGTG
GAACCAATCAAAATGCCGACAAAAACAAACAGAAGCCTCTGCTCTCTGAAGAGATAGTTAATGGATCTGGGGAGAGATCTGGGGTGTTTGAGAGCTTTTGGGGAATATGG
CGATGTTGGAGCCGGCGGAACCTCTTCATCTCGCCGGTGATTGATGCTGGATTGCTTATGGAGCTGTTTGATGCTCTGCATTGCTGTGTGATGGGTTGTTTGAGATTTGA
TTCACCGCAGCTTCTGAACGTTGTCACAGATCAAGAAGAATAA
Protein sequenceShow/hide protein sequence
MTSYKSSSTGDNNPQPPAPNTDGDSAPCFTKSIYPRPRNLLRARQTCRKRSANCRTSFRGANTGQRRLKDEEGGTNQNADKNKQKPLLSEEIVNGSGERSGVFESFWGIW
RCWSRRNLFISPVIDAGLLMELFDALHCCVMGCLRFDSPQLLNVVTDQEE