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HG10020298 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020298
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:30659716..30659964
RNA-Seq ExpressionHG10020298
SyntenyHG10020298
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044076.1 hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa]2.1e-2276.19Show/hide
Query:  MSQRPSRHQRRPSQGVFIAADYLSEPPPP--AGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS
        MSQRP RHQRRPSQGVF+AADYLSEPPPP   G GSTVESGGPHS +LTRPPQQSR ADP      A RPPAP A+N+A NPAS
Subjt:  MSQRPSRHQRRPSQGVFIAADYLSEPPPP--AGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS

KAG6580559.1 hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1971.95Show/hide
Query:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS
        MSQR  RHQRRPSQ VFIAADYLSEPP   G GS VE  GPHS  L RPPQQSR ADP     AA RPPAP ASNEAPNP +
Subjt:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS

KAG6596419.1 hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1869.51Show/hide
Query:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS
        MSQR  RHQRRPSQGVF+ ADYLSEPPPP G    VES  P S+ L+RPP QSR ADP AA     RPPAP  SNEAPNPAS
Subjt:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS

KGN58888.1 hypothetical protein Csa_002334 [Cucumis sativus]4.7e-2276.47Show/hide
Query:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSN-ILTRPPQQSRTADPSAAAAAAVRPPAP--VASNEAPNPAS
        MSQRPSRHQRRPSQGVF+ ADYLS+PPPP G GSTVESGGPHS+ +LTRP QQSR+ADP AA     RPPAP  VA+N+APNPAS
Subjt:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSN-ILTRPPQQSRTADPSAAAAAAVRPPAP--VASNEAPNPAS

TrEMBL top hitse value%identityAlignment
A0A0A0LAM0 Uncharacterized protein2.3e-2276.47Show/hide
Query:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSN-ILTRPPQQSRTADPSAAAAAAVRPPAP--VASNEAPNPAS
        MSQRPSRHQRRPSQGVF+ ADYLS+PPPP G GSTVESGGPHS+ +LTRP QQSR+ADP AA     RPPAP  VA+N+APNPAS
Subjt:  MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSN-ILTRPPQQSRTADPSAAAAAAVRPPAP--VASNEAPNPAS

A0A5A7TPQ1 Uncharacterized protein1.0e-2276.19Show/hide
Query:  MSQRPSRHQRRPSQGVFIAADYLSEPPPP--AGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS
        MSQRP RHQRRPSQGVF+AADYLSEPPPP   G GSTVESGGPHS +LTRPPQQSR ADP      A RPPAP A+N+A NPAS
Subjt:  MSQRPSRHQRRPSQGVFIAADYLSEPPPP--AGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAACGACCGAGCAGGCACCAGAGGAGGCCTTCGCAAGGCGTTTTCATCGCCGCTGATTACCTCTCCGAACCGCCACCGCCGGCCGGACAGGGATCCACGGTCGA
ATCTGGAGGTCCGCACTCGAATATCCTTACTCGGCCACCACAGCAGAGTCGCACCGCTGATCCGTCGGCGGCGGCGGCGGCCGCGGTAAGGCCTCCTGCTCCGGTGGCGT
CGAATGAAGCTCCGAATCCGGCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAACGACCGAGCAGGCACCAGAGGAGGCCTTCGCAAGGCGTTTTCATCGCCGCTGATTACCTCTCCGAACCGCCACCGCCGGCCGGACAGGGATCCACGGTCGA
ATCTGGAGGTCCGCACTCGAATATCCTTACTCGGCCACCACAGCAGAGTCGCACCGCTGATCCGTCGGCGGCGGCGGCGGCCGCGGTAAGGCCTCCTGCTCCGGTGGCGT
CGAATGAAGCTCCGAATCCGGCGAGCTAG
Protein sequenceShow/hide protein sequence
MSQRPSRHQRRPSQGVFIAADYLSEPPPPAGQGSTVESGGPHSNILTRPPQQSRTADPSAAAAAAVRPPAPVASNEAPNPAS