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HG10020312 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020312
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionmetallothionein-like protein type 2
Genome locationChr04:30788197..30788847
RNA-Seq ExpressionHG10020312
SyntenyHG10020312
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000347 - Metallothionein, family 15, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD26571.1 type-2 metallothionein [Citrullus lanatus]1.1e-3696.1Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCGSGCGGCKMFPDMSFSE TATIETFVVGFAP KMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

KAG6596409.1 Metallothionein-like protein type 2, partial [Cucurbita argyrosperma subsp. sororia]8.3e-3796.1Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCKMFPD+SFSETTATIETFVVG APQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

XP_022934858.1 metallothionein-like protein type 2 B [Cucurbita moschata]1.8e-3694.81Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCKMFPDMSFSETTATIETFVVG APQKMSFE +EMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

XP_022949247.1 metallothionein-like protein type 2 [Cucurbita moschata]2.8e-3797.4Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCKMFPDMSFSETTATIETFVVG APQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

XP_038906044.1 metallothionein-like protein type 2 [Benincasa hispida]7.5e-3898.7Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

TrEMBL top hitse value%identityAlignment
A0A1S3B6L7 metallothionein-like protein type 23.4e-3693.51Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCK FPD+SFSETTATIETFVVGFAPQKMS+EVAEMGAENGCKCGDNCTCDPC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

A0A6J1F8X2 metallothionein-like protein type 2 B8.9e-3794.81Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCKMFPDMSFSETTATIETFVVG APQKMSFE +EMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

A0A6J1GBI9 metallothionein-like protein type 21.4e-3797.4Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCKMFPDMSFSETTATIETFVVG APQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

A0A6J1I8Z4 metallothionein-like protein type 21.4e-3797.4Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCG+GCGGCKMFPDMSFSETTATIETFVVG APQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

Q6I674 Type-2 metallothionein5.2e-3796.1Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCGSGCGGCKMFPDMSFSE TATIETFVVGFAP KMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK

SwissProt top hitse value%identityAlignment
P30564 Metallothionein-like protein type 21.4e-2670.37Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGA----ENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCG+GCGGCKM+PDMSFSE T T ET V+G   +K  FE  EMG     E GCKCGDNCTC+PC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGA----ENGCKCGDNCTCDPCNCK

P43390 Metallothionein-like protein type 23.1e-2670.89Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMG--AENGCKCGDNCTCDPCNCK
        MSCCGG CGCGS+C CGSGCGGC M+PD+S+SE T T ET +VG APQK  FE +EMG  AENGCKCG +C CDPC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMG--AENGCKCGDNCTCDPCNCK

Q39459 Metallothionein-like protein 24.0e-2673.75Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEM--GAEN-GCKCGDNCTCDPCNCK
        MSCCGGNCGCGS+CKCGSGCGGCKM+PDMS++E T T ET V+G A  K  FE AEM  GAEN GCKCG NCTC+PC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEM--GAEN-GCKCGDNCTCDPCNCK

Q40158 Metallothionein-like protein type 2 B1.4e-2666.25Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMG----AENGCKCGDNCTCDPCNC
        MSCCGGNCGCGS+CKCG+GCGGCKM+PDMS++E++ T ET V+G  P+K SF   EMG    AENGCKCG +C C+PC C
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMG----AENGCKCGDNCTCDPCNC

Q41657 Metallothionein-like protein type 25.2e-2669.23Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAEN-GCKCGDNCTCDPCNCK
        MSCCGGNCGCGS+CKCGSGCGGCKM+ D+S++E+T T ET ++G   +K  +E AEMGAEN GCKCG NCTC+PC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAEN-GCKCGDNCTCDPCNCK

Arabidopsis top hitse value%identityAlignment
AT3G09390.1 metallothionein 2A6.5e-2464.2Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAP-QKMSFEVA--EMGAEN-GCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCG+GCGGCKM+PD+ FS  T T ETFV+G AP  K  +E +     AEN  CKCG +C CDPC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAP-QKMSFEVA--EMGAEN-GCKCGDNCTCDPCNCK

AT5G02380.1 metallothionein 2B1.4e-1856.79Show/hide
Query:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAE----MGAENGCKCGDNCTCDPCNCK
        MSCCGG+CGCGSACKCG+GCGGCK +PD+   E TAT ET V+G AP   S   A     +   + CKCG +C C+PC CK
Subjt:  MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAE----MGAENGCKCGDNCTCDPCNCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGCTGTGGTGGAAACTGTGGGTGCGGCTCTGCCTGCAAGTGCGGAAGTGGCTGTGGAGGATGCAAGATGTTCCCTGACATGAGCTTCTCAGAGACCACCGCTAC
CATCGAGACCTTCGTAGTCGGTTTCGCTCCTCAGAAGATGTCCTTCGAGGTAGCAGAGATGGGAGCTGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCAT
GCAACTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTGCTGTGGTGGAAACTGTGGGTGCGGCTCTGCCTGCAAGTGCGGAAGTGGCTGTGGAGGATGCAAGATGTTCCCTGACATGAGCTTCTCAGAGACCACCGCTAC
CATCGAGACCTTCGTAGTCGGTTTCGCTCCTCAGAAGATGTCCTTCGAGGTAGCAGAGATGGGAGCTGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCAT
GCAACTGTAAATGA
Protein sequenceShow/hide protein sequence
MSCCGGNCGCGSACKCGSGCGGCKMFPDMSFSETTATIETFVVGFAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK