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HG10020320 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020320
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR4
Genome locationChr04:30865465..30865683
RNA-Seq ExpressionHG10020320
SyntenyHG10020320
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580535.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2986.49Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC
        MEAKQGPANYEEECSTPTRWECRIPAV NCPPPP   KKK  + GKKREPPKHGYFQPPDLEALFSV  RREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC

XP_022983341.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita maxima]9.1e-3087.84Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC
        MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP   KKK    GKKREPPKHGYFQPPDLEALFSV  RREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC

XP_023528630.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita pepo subsp. pepo]4.1e-3087.84Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC
        MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP   KKK  + GKKREPPKHGYFQPPDLEALFSV  RREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC

XP_031737830.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucumis sativus]2.4e-3086.11Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        M++KQG  NYEEECSTPTRWECRIPAVFNCPPPPKKK  T GKKREPPKHGYFQPPDLEALFS+  RREACA
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

XP_038905412.1 cyclin-dependent protein kinase inhibitor SMR4 [Benincasa hispida]1.2e-3495.83Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKR+PPKHGYFQPPDLEALFSV  RREACA
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

TrEMBL top hitse value%identityAlignment
A0A067LDV9 Uncharacterized protein5.3e-1566.1Show/hide
Query:  CSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        C+TP R ECRIP    CPPPPKK+    GKK+EPPK+GYFQPPDLE LF+++SR +ACA
Subjt:  CSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

A0A0A0LAJ2 Uncharacterized protein1.2e-3086.11Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        M++KQG  NYEEECSTPTRWECRIPAVFNCPPPPKKK  T GKKREPPKHGYFQPPDLEALFS+  RREACA
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

A0A6J1J1Y0 cyclin-dependent protein kinase inhibitor SMR44.4e-3087.84Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC
        MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP   KKK    GKKREPPKHGYFQPPDLEALFSV  RREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPP---KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREAC

A0A6P5ZVS9 cyclin-dependent protein kinase inhibitor SMR4-like1.4e-1568.25Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPP-KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        +E  STPTR ECRIP V  CPPPP KKK+ + GKKREPPK+GYFQPPDLE  FS+ + R+ACA
Subjt:  EEECSTPTRWECRIPAVFNCPPPP-KKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

W9RWM9 Uncharacterized protein5.3e-1565.57Show/hide
Query:  EECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        E+C+TP R ECRIP  F CPPPP+KK    G KR PPK+GYFQPPDL++LF + SRR+ACA
Subjt:  EECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR47.3e-1458.06Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        EE C+TP     RIP    CPPPP+KK+    +KR+PP++GYFQPPDLE LF    RREACA
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR52.1e-1356.25Show/hide
Query:  NYEEECSTPTRWECRIPAVFNCPPPPKKK--IGTDGKKREPPKHGYFQPPDLEALFSVSSRREA
        +Y+  C+TPTR +CRIPA   CPPP ++K  +   GKKREPPK GYFQPPDL+  FSV +  +A
Subjt:  NYEEECSTPTRWECRIPAVFNCPPPPKKK--IGTDGKKREPPKHGYFQPPDLEALFSVSSRREA

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein5.2e-1558.06Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA
        EE C+TP     RIP    CPPPP+KK+    +KR+PP++GYFQPPDLE LF    RREACA
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA

AT5G40460.1 unknown protein1.9e-0437.1Show/hide
Query:  EAKQGPANYEEECS-TPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALF
        E ++   N EEECS TPT  E +IP +  CPP P+K+      +    +  +  P DLE +F
Subjt:  EAKQGPANYEEECS-TPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGAAACAGGGGCCTGCAAATTACGAGGAAGAGTGTTCGACGCCGACCCGGTGGGAGTGTCGGATTCCGGCGGTGTTCAACTGTCCGCCGCCGCCGAAGAAGAA
GATTGGAACTGATGGGAAGAAGCGGGAGCCACCGAAACATGGATATTTTCAGCCCCCTGATCTTGAAGCTCTGTTTTCTGTTTCTTCCAGAAGGGAAGCCTGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCGAAACAGGGGCCTGCAAATTACGAGGAAGAGTGTTCGACGCCGACCCGGTGGGAGTGTCGGATTCCGGCGGTGTTCAACTGTCCGCCGCCGCCGAAGAAGAA
GATTGGAACTGATGGGAAGAAGCGGGAGCCACCGAAACATGGATATTTTCAGCCCCCTGATCTTGAAGCTCTGTTTTCTGTTTCTTCCAGAAGGGAAGCCTGTGCTTAA
Protein sequenceShow/hide protein sequence
MEAKQGPANYEEECSTPTRWECRIPAVFNCPPPPKKKIGTDGKKREPPKHGYFQPPDLEALFSVSSRREACA