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HG10020329 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020329
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLight-harvesting complex-like protein OHP1, chloroplastic
Genome locationChr04:30912360..30912909
RNA-Seq ExpressionHG10020329
SyntenyHG10020329
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW87355.1 Light-harvesting complex-like protein OHP1, chloroplastic [Vitis vinifera]1.4e-2492.19Show/hide
Query:  KVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        KVELPKVEPKFEAPFLGFT+TAEIWNSRACMIGLIG F+VELILNK ILQVIGVD+GKGLDLPL
Subjt:  KVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
XP_008442523.1 PREDICTED: high-light-induced protein, chloroplastic [Cucumis melo]9.5e-26100Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
XP_038905156.1 light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]1.8e-2495.24Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VELPKVEPKFEAPFLGFTKTAE+WNSRACMIGLIG FVVELILNK ILQVIGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
XP_039173619.1 uncharacterized protein LOC104426439 [Eucalyptus grandis]3.1e-2485.07Show/hide
Query:  SVLKVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        ++L+VE+PKVEPKF+APFLGFT+TAEIWNSRACMIGLIGTF+VELI+NK ILQVIGV+VGKGLDLPL
Subjt:  SVLKVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
XP_042511423.1 light-harvesting complex-like protein OHP1, chloroplastic [Macadamia integrifolia]2.3e-2493.65Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VELPKVEPKF APFLGFTKTAEIWNSRACMIGLIGTF+VELILNK ILQ+IGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
TrEMBL top hitse value%identityAlignment
A0A0A0LAI0 Uncharacterized protein1.5e-2495.24Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VELPKVEPKF+APFLGFTKTAEIWNSRACMIGLIG FVVELILNK ILQVIGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
A0A1S3B5V9 high-light-induced protein, chloroplastic4.6e-26100Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
A0A1U8A7L6 light-harvesting complex-like protein OHP1, chloroplastic1.9e-2492.06Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VE+PKVEPKF++PFLGFTKTAEIWNSRACMIGLIGTF+VELILNK ILQVIGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
A0A438HSC8 Light-harvesting complex-like protein OHP1, chloroplastic6.7e-2592.19Show/hide
Query:  KVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        KVELPKVEPKFEAPFLGFT+TAEIWNSRACMIGLIG F+VELILNK ILQVIGVD+GKGLDLPL
Subjt:  KVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
A0A5A7TRS8 High-light-induced protein4.6e-26100Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
SwissProt top hitse value%identityAlignment
O81208 Light-harvesting complex-like protein OHP1, chloroplastic1.9e-2176.19Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        V +PK +PK +  FLGFT+TAEIWNSRACMIGLIGTF+VELILNK IL++IGV++GKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
Arabidopsis top hitse value%identityAlignment
AT5G02120.1 one helix protein1.4e-2276.19Show/hide
Query:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL
        V +PK +PK +  FLGFT+TAEIWNSRACMIGLIGTF+VELILNK IL++IGV++GKGLDLPL
Subjt:  VELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTCTGTCTCTTTCAAATTGGGTCTGTCCGTGCCAATAACAGCAGGGCTCGTGCTCCTTTCAGGGTTCAGGCCGCAAAGCCTCCGGCTGGAGTACGCTGTCTA
TCCTCTTCAAATTTGTGGACTTTTTCCCATTTCTGTTTCACCTGTTGAAAAAAATCGTTTACATCTCAAAAGCTTAAAGAAATTCAGAATAATTAATTCATGTGGTCTTG
CGAATTACCTTTTCATTTCTGTTTTGAAGGTTGAATTGCCAAAAGTAGAGCCGAAATTCGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCCAGA
GCCTGTATGATAGGCCTCATTGGAACTTTCGTAGTGGAGCTGATATTGAACAAGAGTATACTTCAGGTGATTGGAGTTGATGTTGGGAAAGGCCTGGATCTTCCTCTTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACTCTGTCTCTTTCAAATTGGGTCTGTCCGTGCCAATAACAGCAGGGCTCGTGCTCCTTTCAGGGTTCAGGCCGCAAAGCCTCCGGCTGGAGTACGCTGTCTA
TCCTCTTCAAATTTGTGGACTTTTTCCCATTTCTGTTTCACCTGTTGAAAAAAATCGTTTACATCTCAAAAGCTTAAAGAAATTCAGAATAATTAATTCATGTGGTCTTG
CGAATTACCTTTTCATTTCTGTTTTGAAGGTTGAATTGCCAAAAGTAGAGCCGAAATTCGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCCAGA
GCCTGTATGATAGGCCTCATTGGAACTTTCGTAGTGGAGCTGATATTGAACAAGAGTATACTTCAGGTGATTGGAGTTGATGTTGGGAAAGGCCTGGATCTTCCTCTTTG
A
Protein sequenceShow/hide protein sequence
MADSVSFKLGLSVPITAGLVLLSGFRPQSLRLEYAVYPLQICGLFPISVSPVEKNRLHLKSLKKFRIINSCGLANYLFISVLKVELPKVEPKFEAPFLGFTKTAEIWNSR
ACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL