; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020355 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020355
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationChr04:31133685..31134807
RNA-Seq ExpressionHG10020355
SyntenyHG10020355
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137753.1 uncharacterized protein LOC101220657 isoform X1 [Cucumis sativus]3.8e-5685.21Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        MS+KK SD SSFSFTSDLFG +DTSSLSSNHIFGPVFSSSFK +  HSEVGGKS A S  PKTEGNSKYKECKN STSSREM SFYQEQR  PCHLSSSI
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSLKRD-GGEDDSGGASRGNWWQGA
        YYGGQDVYTQNP TGFNS LKRD GGEDDSGGASRGNWWQG+
Subjt:  YYGGQDVYTQNPGTGFNSSLKRD-GGEDDSGGASRGNWWQGA

XP_008442495.1 PREDICTED: uncharacterized protein LOC103486348 isoform X1 [Cucumis melo]1.9e-5584.72Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS    KAS +SEVGGKS A S SPKTEG+SKYKECKN STSSRE+ SFYQEQR  PCHLSS
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS

Query:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        SIYYGGQD+YT QNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

XP_038905456.1 uncharacterized protein LOC120091479 isoform X1 [Benincasa hispida]4.8e-5987.23Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        MS+KK SDGSSFSFTSDLFGT+DTS LSS HIFGP++SSSF KAS HSEVGGKS+AFSCS KTEG S+YKECKNQSTSSREM SFYQEQR  PCHLSSSI
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        YYGG+DVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

XP_038905457.1 uncharacterized protein LOC120091479 isoform X2 [Benincasa hispida]6.3e-5987.86Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        MS+KK SDGSSFSFTSDLFGT+DTS LSS HIFGP++SSSF KAS HSEVGGKS+AFSCS KTEG S+YKECKNQSTSSREM SFYQEQR  PCHLSSSI
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQG
        YYGG+DVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQG
Subjt:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQG

XP_038905460.1 uncharacterized protein LOC120091479 isoform X3 [Benincasa hispida]3.5e-5786.52Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        MS+KK SDGSSFSFTSDLFGT+DTS LSS HIFGP++SSSF KAS HSEVGGKS+AFSCS KT G S+YKECKNQSTSSREM SFYQEQR  PCHLSSSI
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        YYGG+DVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

TrEMBL top hitse value%identityAlignment
A0A0A0LD07 Uncharacterized protein1.9e-5685.21Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        MS+KK SD SSFSFTSDLFG +DTSSLSSNHIFGPVFSSSFK +  HSEVGGKS A S  PKTEGNSKYKECKN STSSREM SFYQEQR  PCHLSSSI
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSLKRD-GGEDDSGGASRGNWWQGA
        YYGGQDVYTQNP TGFNS LKRD GGEDDSGGASRGNWWQG+
Subjt:  YYGGQDVYTQNPGTGFNSSLKRD-GGEDDSGGASRGNWWQGA

A0A1S3B5B7 uncharacterized protein LOC103486348 isoform X19.2e-5684.72Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS    KAS +SEVGGKS A S SPKTEG+SKYKECKN STSSRE+ SFYQEQR  PCHLSS
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS

Query:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        SIYYGGQD+YT QNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

A0A1S3B5T7 uncharacterized protein LOC103486348 isoform X28.6e-5484.03Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS    KAS +SEVGGKS A S SPKT G+SKYKECKN STSSRE+ SFYQEQR  PCHLSS
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS

Query:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        SIYYGGQD+YT QNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

A0A1S4DUN5 uncharacterized protein LOC103486348 isoform X32.3e-5483.8Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS   +  +SEVGGKS A S SPKTEG+SKYKECKN STSSRE+ SFYQEQR  PCHLSSSI
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        YYGGQD+YT QNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  YYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

A0A5D3DN19 Uncharacterized protein9.2e-5684.72Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS    KAS +SEVGGKS A S SPKTEG+SKYKECKN STSSRE+ SFYQEQR  PCHLSS
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFK--KASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSS

Query:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        SIYYGGQD+YT QNPGTGFNSSLKRDGGEDDSGGASRGNWWQG+
Subjt:  SIYYGGQDVYT-QNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein3.1e-1136.96Show/hide
Query:  GTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPK--TEGN-------SKYKEC-------KNQSTSSREMVSFYQEQRAGPCHLSSSIYYG
        G+  +SS S +HIFGP  S S+      S   G  ++    P   T+GN       +KY+         + + + ++E  S+  E+   PC+LSSSIYYG
Subjt:  GTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPK--TEGN-------SKYKEC-------KNQSTSSREMVSFYQEQRAGPCHLSSSIYYG

Query:  GQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        GQD Y+ +  T    + K+DG E DS  ASRGNWW+G+
Subjt:  GQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

AT3G55646.1 unknown protein9.5e-1338.24Show/hide
Query:  TKDTSSLSS-NHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTE------------GNSKYK--ECKNQSTSSREMVSFYQEQRAGPCHLSSSIYYGGQ
        +  +SSLSS +HIFGP  SS     S  S   G  ++    P  +            G+ KY+    K + ++ +E  S+Y E+   PCHLSSS+YYGGQ
Subjt:  TKDTSSLSS-NHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTE------------GNSKYK--ECKNQSTSSREMVSFYQEQRAGPCHLSSSIYYGGQ

Query:  DVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        + Y+    T  + + K+DG E DS  ASRGNWW+G+
Subjt:  DVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).3.4e-1845.39Show/hide
Query:  TSDGSSFSFTSDLFGTKDT-SSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSC----SPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        +S  SS S TS+LFG+++  SS SS+ I G +F    K     S V  ++    C    + KT GN      +N+         + Q+QR  PCHLSSSI
Subjt:  TSDGSSFSFTSDLFGTKDT-SSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSC----SPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA
        YYGG DVY Q   +  NS+ K+DGGEDDSG ASRGNWWQG+
Subjt:  YYGGQDVYTQNPGTGFNSSLKRDGGEDDSGGASRGNWWQGA

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).2.7e-0738.33Show/hide
Query:  TSDGSSFSFTSDLFGTKDT-SSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSC----SPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI
        +S  SS S TS+LFG+++  SS SS+ I G +F    K     S V  ++    C    + KT GN      +N+         + Q+QR  PCHLSSSI
Subjt:  TSDGSSFSFTSDLFGTKDT-SSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSC----SPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSI

Query:  YYGGQDVYTQNPGTGFNSSL
        YYGG DVY Q   +  NS++
Subjt:  YYGGQDVYTQNPGTGFNSSL

AT5G59080.1 unknown protein8.1e-1238.19Show/hide
Query:  TSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSIYYGGQ
        +S  +S SFT++LFG+KD S  SS+     +FS+ F   S  S   G +                  K+ S + R      QE R  PCHLSSS+YYGGQ
Subjt:  TSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSIYYGGQ

Query:  DVYTQNPGTGFNSSLKRD---GGEDDSGG-----ASRGNWWQGA
        DVY ++        +K D    GEDD+ G      SRGNWWQG+
Subjt:  DVYTQNPGTGFNSSLKRD---GGEDDSGG-----ASRGNWWQGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATAAGAAAACATCTGATGGGTCATCTTTTTCCTTCACTTCTGATCTATTTGGGACCAAAGACACTTCTTCACTCTCATCTAATCACATTTTTGGCCCTGTATT
CTCATCTTCTTTCAAGAAGGCCTCCCATCACTCCGAAGTCGGTGGCAAATCACAAGCTTTTTCATGCTCCCCCAAAACTGAAGGCAATTCCAAATATAAGGAATGCAAGA
ATCAGAGCACATCAAGCAGAGAAATGGTTTCGTTTTATCAGGAACAGAGAGCAGGCCCATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTCTATACCCAA
AACCCTGGAACTGGATTCAACTCCTCTTTGAAGAGAGATGGAGGAGAAGATGATTCTGGTGGTGCTTCCAGAGGAAATTGGTGGCAAGGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATAAGAAAACATCTGATGGGTCATCTTTTTCCTTCACTTCTGATCTATTTGGGACCAAAGACACTTCTTCACTCTCATCTAATCACATTTTTGGCCCTGTATT
CTCATCTTCTTTCAAGAAGGCCTCCCATCACTCCGAAGTCGGTGGCAAATCACAAGCTTTTTCATGCTCCCCCAAAACTGAAGGCAATTCCAAATATAAGGAATGCAAGA
ATCAGAGCACATCAAGCAGAGAAATGGTTTCGTTTTATCAGGAACAGAGAGCAGGCCCATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTCTATACCCAA
AACCCTGGAACTGGATTCAACTCCTCTTTGAAGAGAGATGGAGGAGAAGATGATTCTGGTGGTGCTTCCAGAGGAAATTGGTGGCAAGGTGCATGA
Protein sequenceShow/hide protein sequence
MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKASHHSEVGGKSQAFSCSPKTEGNSKYKECKNQSTSSREMVSFYQEQRAGPCHLSSSIYYGGQDVYTQ
NPGTGFNSSLKRDGGEDDSGGASRGNWWQGA