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HG10020385 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020385
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Genome locationChr04:31349050..31349370
RNA-Seq ExpressionHG10020385
SyntenyHG10020385
Gene Ontology termsGO:0002128 - tRNA nucleoside ribose methylation (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005838 - proteasome regulatory particle (cellular component)
GO:0008175 - tRNA methyltransferase activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0070122 - isopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044157.1 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1 [Cucumis melo var. makuwa]1.3e-3798.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

XP_004137730.1 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Cucumis sativus]1.3e-3798.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

XP_008442455.1 PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1 [Cucumis melo]1.3e-3798.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

XP_016899730.1 PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X2 [Cucumis melo]1.3e-3798.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

XP_038903231.1 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Benincasa hispida]5.1e-3797.5Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYR LDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

TrEMBL top hitse value%identityAlignment
A0A0A0LCV6 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase6.5e-3898.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

A0A1S3B6C8 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase6.5e-3898.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

A0A1S4DVJ2 putative tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X26.5e-3898.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

A0A5A7TQN9 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase6.5e-3898.75Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLSLDS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

A0A6J1IYY9 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase3.2e-3797.5Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS
        DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQG RELEKLS DS
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS

SwissProt top hitse value%identityAlignment
O36015 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase8.0e-0956.25Show/hide
Query:  PFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMK
        PF+ACGDL GYD+D +YP+    +    +LD +QPP APPYKRA+E+K
Subjt:  PFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMK

P38238 tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase1.2e-0945.33Show/hide
Query:  CYI--VSLSDCSSGWLEGPNKVYIPFLACGDLSGYDSDRSY-PLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKA
        C++  + +SD  S W E    +   F+ACG L  +DSD +Y  LP    GT  SLDPVQ P  PPYK+ALE+K++
Subjt:  CYI--VSLSDCSSGWLEGPNKVYIPFLACGDLSGYDSDRSY-PLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKA

Q22031 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase8.3e-0646.67Show/hide
Query:  FLACGDLSGYDSDRSYPL------PRG-----AEGTYRSLDPVQPPIAPPYKRALEMKKA
        F+ CGDLSG+DS++SYPL      P+G      +  Y   D VQPP  P YK AL+ KK+
Subjt:  FLACGDLSGYDSDRSYPL------PRG-----AEGTYRSLDPVQPPIAPPYKRALEMKKA

Q9UET6 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase1.2e-1251.72Show/hide
Query:  LEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKK
        L+GP ++ +PF+ CGDLS YDSDRSYPL       Y+   P QPPI+PPY+ A  +K+
Subjt:  LEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKK

Arabidopsis top hitse value%identityAlignment
AT5G01230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein2.6e-3186.96Show/hide
Query:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEG-TYRSLDPVQPPIAPPYKRALEMKKASSQ
        DCSSGWLEGPNKVYIPFLACGDL+GYDSDRSYPLPR A+G +Y+SLDP+QPPIAPPYKRALE+KKAS+Q
Subjt:  DCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEG-TYRSLDPVQPPIAPPYKRALEMKKASSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAATTCCCTGGTATTTTTGGTTACACAAGAGGAAGTAATAGCATTGCTATTTTGCTACATTGTGTCCCTCTCAGATTGCAGTAGTGGGTGGCTGGAAGGTCCCAA
TAAAGTTTACATCCCATTTCTTGCCTGTGGGGACCTCAGTGGATATGACTCCGACCGTTCATACCCACTGCCCAGAGGTGCCGAGGGAACTTATCGGAGCTTAGATCCTG
TGCAGCCTCCCATCGCCCCTCCTTACAAGAGGGCTCTTGAAATGAAGAAAGCTTCCAGTCAAGGAAGTCGAGAACTTGAAAAACTTTCCTTGGATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAATTCCCTGGTATTTTTGGTTACACAAGAGGAAGTAATAGCATTGCTATTTTGCTACATTGTGTCCCTCTCAGATTGCAGTAGTGGGTGGCTGGAAGGTCCCAA
TAAAGTTTACATCCCATTTCTTGCCTGTGGGGACCTCAGTGGATATGACTCCGACCGTTCATACCCACTGCCCAGAGGTGCCGAGGGAACTTATCGGAGCTTAGATCCTG
TGCAGCCTCCCATCGCCCCTCCTTACAAGAGGGCTCTTGAAATGAAGAAAGCTTCCAGTCAAGGAAGTCGAGAACTTGAAAAACTTTCCTTGGATTCCTAA
Protein sequenceShow/hide protein sequence
MVNSLVFLVTQEEVIALLFCYIVSLSDCSSGWLEGPNKVYIPFLACGDLSGYDSDRSYPLPRGAEGTYRSLDPVQPPIAPPYKRALEMKKASSQGSRELEKLSLDS