CuGenDBv2

Gene ID	HG10020426
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pyruvate decarboxylase
Genome location	Chr04:31765821..31766274
RNA-Seq Expression	HG10020426
Synteny	HG10020426
Gene Ontology terms	GO:0001666 - response to hypoxia (biological process) GO:0005829 - cytosol (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004737 - pyruvate decarboxylase activity (molecular function) GO:0030976 - thiamine pyrophosphate binding (molecular function)
InterPro domains	IPR012110 - Thiamine pyrophosphate (TPP)-dependent enzyme IPR029061 - Thiamin diphosphate-binding fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044189.1 pyruvate decarboxylase 1 [Cucumis melo var. makuwa]

2.6e-61

96.67

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVI+NWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAH+DDTS+
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

NP_001284421.1 pyruvate decarboxylase 1 [Cucumis melo]

5.3e-62

98.33

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

TYK24943.1 pyruvate decarboxylase 1 [Cucumis melo var. makuwa]

1.2e-61

97.5

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVI+NWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

XP_004137700.1 pyruvate decarboxylase 1 [Cucumis sativus]

1.3e-60

95.83

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNG+GKCWTTKV+CEEELVEAIETAT+AKKD LCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

XP_038906211.1 pyruvate decarboxylase 1 [Benincasa hispida]

2.0e-61

97.5

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKD LCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

TrEMBL top hits

e value

%identity

Alignment

A0A060IPA1 Pyruvate decarboxylase

2.6e-62

98.33

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

A0A0A0LF82 Pyruvate decarboxylase

6.3e-61

95.83

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNG+GKCWTTKV+CEEELVEAIETAT+AKKD LCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

A0A0V0I9X7 Pyruvate decarboxylase

1.4e-60

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTM+RCGQ+TIIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

A0A5A7TSI9 Pyruvate decarboxylase

1.3e-61

96.67

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVI+NWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAH+DDTS+
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

A0A5D3DMT1 Pyruvate decarboxylase

5.7e-62

97.5

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVI+NWNYTALVDAIHNG+GKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAH+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

SwissProt top hits

e value

%identity

Alignment

A2Y5L9 Pyruvate decarboxylase 1

4.1e-57

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        Q+TAQD+STM+RCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YT L+DAIHN DG CWT KVR EEEL+EAI TAT AKKD LCFIE+I H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

P51851 Pyruvate decarboxylase 2 (Fragment)

6.7e-60

90.83

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQD+STM+RCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG+GKCWTTKV CEEELVEAI  AT  KKDSLCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

Q9FFT4 Pyruvate decarboxylase 2

3.3e-59

88.33

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Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQD+STMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTA V+AIHNG+GKCWT KVRCEEELV+AI TAT  +K+S CFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

Q9M039 Pyruvate decarboxylase 3

1.3e-58

90.83

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQD+STMIR GQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG+GKCWTTKVR EEELVEAI TAT  KKDSLCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAAN RPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

Q9M040 Pyruvate decarboxylase 4

1.6e-58

90.83

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIR GQK IIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG+GKCWTTKVR EEELVEAI+TAT  KKDSLCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAAN RPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

Arabidopsis top hits

e value

%identity

Alignment

AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein

6.4e-58

88.33

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVT QDISTM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG+G CWT KVR EEELVEAI TAT  KKD LCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

AT5G01320.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein

1.2e-59

90.83

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQDISTMIR GQK IIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG+GKCWTTKVR EEELVEAI+TAT  KKDSLCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAAN RPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

AT5G01330.1 pyruvate decarboxylase-3

9.0e-60

90.83

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQD+STMIR GQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT LVDAIHNG+GKCWTTKVR EEELVEAI TAT  KKDSLCFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAAN RPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

AT5G54960.1 pyruvate decarboxylase-2

2.4e-60

88.33

Show/hide

Query:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK
        QVTAQD+STMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTA V+AIHNG+GKCWT KVRCEEELV+AI TAT  +K+S CFIEVI H+DDTSK
Subjt:  QVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSK

Query:  ELLEWGSRVSAANSRPPNPQ
        ELLEWGSRVSAANSRPPNPQ
Subjt:  ELLEWGSRVSAANSRPPNPQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCACAGGTGACTGCACAAGACATATCGACGATGATCCGTTGCGGACAGAAAACCATAATTTTCTTGATAAACAATGGTGGTTACACTATTGAAGTCGAGATCCACGA
CGGGCCTTATAATGTGATCAAGAACTGGAACTACACGGCATTGGTCGATGCAATCCACAACGGGGACGGGAAGTGTTGGACGACAAAGGTTCGATGTGAGGAAGAGCTTG
TGGAGGCCATTGAAACAGCTACAGAAGCCAAAAAGGATAGCTTGTGTTTCATTGAGGTAATTGCTCACAGGGATGATACAAGCAAAGAGCTATTGGAATGGGGCTCAAGA
GTCTCTGCTGCCAACAGCCGCCCTCCCAATCCTCAGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSQVTAQDISTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGDGKCWTTKVRCEEELVEAIETATEAKKDSLCFIEVIAHRDDTSKELLEWGSR
VSAANSRPPNPQ

HG10020426 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome