CuGenDBv2

Gene ID	HG10020439
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome location	Chr04:31862335..31862622
RNA-Seq Expression	HG10020439
Synteny	HG10020439
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit

Homology

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GenBank top hits

e value

%identity

Alignment

AXR92940.1 NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis var. assamica]

5.4e-38

87.91

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRI+SQ+ENRYFTTNHKFHV  +
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN

QLJ92696.1 NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis]

5.4e-38

87.91

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRI+SQ+ENRYFTTNHKFHV  +
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN

YP_009447454.1 NADH dehydrogenase subunit K [Cucurbita maxima]

1.9e-38

92.05

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR+FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

YP_009525190.1 NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa]

4.1e-38

90.11

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR FTTNHKFHV  N
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN

YP_010020248.1 NADH-plastoquinone oxidoreductase subunit K [Gordonia alpestris]

3.2e-38

90.91

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRI+SQ+ENRYFTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IEN2 NADH-quinone oxidoreductase subunit B

9.0e-39

92.05

Show/hide

Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR+FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

A0A0S2IFI4 NADH-quinone oxidoreductase subunit B

9.0e-39

92.05

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR+FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

A0A2H4T1W6 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.0e-39

92.05

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR+FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

A0A346QNL3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.0e-38

90.11

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR FTTNHKFHV  N
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN

A0A7L9DCG6 NADH-quinone oxidoreductase subunit B

1.5e-38

90.91

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRI+SQ+ENRYFTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

SwissProt top hits

e value

%identity

Alignment

B0Z4L3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.7e-40

89.77

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEA+IDAITKLRKKISREIYEDRI+SQEENR FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

B0Z4U7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.7e-40

89.77

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEA+IDAITKLRKKISREIYEDRI+SQEENR FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

Q06GZ3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.7e-40

86.81

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKK+SREIYEDRI SQ+ENRYFTTNHKFHV  +
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNEN

Q4VZH1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

9.2e-41

92.05

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

Q9MTP4 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.7e-40

89.77

Show/hide

Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEA+IDAITKLRKKISREIYEDRI+SQEENR FTTNHKFHV
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

Arabidopsis top hits

e value

%identity

Alignment

AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial

4.9e-13

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISR
        MP+P++VI+MG+C   GG +   SYSVVR  D+++PVD Y+ GCPP  EA++  + +L+KKI+R
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISR

ATCG00430.1 photosystem II reaction center protein G

5.8e-38

84.09

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Query:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV
        MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRKKI+REIY+DRI+ Q+ NR FTTNHKF V
Subjt:  MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHV

Sequences

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CDS sequence

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ATGCCTAAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTGTTGTTCGGAGAATCGATAAGTTAATTCCTGT
CGATGAGTATTTGTCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTC
AAGAGGAGAATCGGTATTTTACTACTAACCACAAATTTCATGTTAATGAAAATGAGATTAAGCAATAA

mRNA sequence

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Protein sequence

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MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNENEIKQ

HG10020439 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome