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HG10020441 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020441
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSel1-like protein
Genome locationChr04:31876660..31877247
RNA-Seq ExpressionHG10020441
SyntenyHG10020441
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]4.2e-42100Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]1.0e-4097.65Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]1.6e-4198.82Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]6.1e-4196.47Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]5.2e-4095.29Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862542.0e-42100Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
A0A5D3DNP0 Sel1-like protein2.0e-42100Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
A0A6J1DSS4 uncharacterized protein LOC1110240627.8e-4298.82Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
A0A6J1F7C2 uncharacterized protein LOC1114415213.0e-4196.47Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
A0A6J1J881 uncharacterized protein LOC1114821713.0e-4196.47Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPG
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)7.2e-3282.19Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PG
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
AT5G05360.1 unknown protein1.6e-3168.29Show/hide
Query:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        + G++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG
Subjt:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
AT5G05360.2 unknown protein1.6e-3168.29Show/hide
Query:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG
        + G++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG
Subjt:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGGACTGAGGGCTTGAATCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAGGAAGCCAAAGCCGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGCGGAGGGACTGAGGGCTTGAATCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAGGAAGCCAAAGCCGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGTTGA
Protein sequenceShow/hide protein sequence
MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPG