; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020464 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020464
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationChr04:32055547..32057229
RNA-Seq ExpressionHG10020464
SyntenyHG10020464
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]1.1e-3970.21Show/hide
Query:  VDSVALQ-IAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLL
        +DS A+  +AMA+GHRRSFKI+VHAKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKSESR+LVQRRRTLKSRMLSFVK+HLGR  SK+P      
Subjt:  VDSVALQ-IAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLL

Query:  AESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAI
        +ES+ Q WHVG          GVG  YL+AL TQIGL NA+
Subjt:  AESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAI

KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]1.8e-0573.17Show/hide
Query:  QGNRTGN-SSYVGEMNFDAHMVVIMAALLCALIGALGVNSI
        QGNRT N S+YVGE+NFD HM + +AALLC LIGA+GVNSI
Subjt:  QGNRTGN-SSYVGEMNFDAHMVVIMAALLCALIGALGVNSI

KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]2.8e-3856.12Show/hide
Query:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRR------GSKMPQYSYLLAESE
        MALGHRRS+KITVHAK+ +LYIK KAT+K PS KF+ LL LDKLL+G+DSKSESRILVQ+ RTLKSR++SFVK+H  RR      G KMP   YL+ E+E
Subjt:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRR------GSKMPQYSYLLAESE

Query:  NQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAIH-----PTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHF
         QSW +GR E    A FGVGL YLLA   + G   A+      P+ +SF+ VC++LFVL  HK K L AML+ +  L LLLL    F+ L+ L  F
Subjt:  NQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAIH-----PTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHF

KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]5.4e-5874.07Show/hide
Query:  IAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSW
        +AMA+GHRRSFKI+V AKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKS SRIL+QRRRTLKSRMLSFVK+HLG R SK P      AES  +SW
Subjt:  IAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSW

Query:  HVGRLELRFVAAFGVGLAY-LLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHFL
        HVG LE R VAAFGVGL Y ++AL TQI L NAI P+F+S IWV L +FVLWL KCK L AMLLLI L PLLL    TFVHLLHLR FL
Subjt:  HVGRLELRFVAAFGVGLAY-LLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHFL

XP_008442323.1 PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo]3.3e-5570.27Show/hide
Query:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHV
        MA+GHRRSFKI+VHAKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKSESR+LVQRRRTLKSRMLSFVK+HLGR  SK+P      +ES+ QSWHV
Subjt:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHV

Query:  GRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHF
        G          GVG  YL+AL TQIGL NA+  +F+S IWV L +FV+WL KCK L A+LLL+ L PLLL    TFVHLLHLRHF
Subjt:  GRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHF

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]2.5e-6375.62Show/hide
Query:  WTVDSVALQIAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYL
        W  D+    +AMALG RRSFKITVHAKICNLYIKLKATLK PS K Q LLKLDKLLIG DSKSES ILVQRRRTLKSRMLSFVK+HLG   SKMP     
Subjt:  WTVDSVALQIAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYL

Query:  LAESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWV--CLLLFVLWLHKCKCLS--AMLLLIVLLPLLLLPFHTFVHLLHLRHF
         AESENQSW VGR+ELR VA FGVGL YLLALNT IGL NAIHP+F+S IWV  CLLLFVLWLHKCK L   A+L LI LLPL LL    FVHLLHLRHF
Subjt:  LAESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWV--CLLLFVLWLHKCKCLS--AMLLLIVLLPLLLLPFHTFVHLLHLRHF

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L359.7e-4575Show/hide
Query:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHV
        MA+GHRRSFKI+V AKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKS SRIL+QRRRTLKSRMLSFVK+HLG R SK P      AES  +SWHV
Subjt:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHV

Query:  GRLELRFVAAFGVGLAY-LLALNTQIGLGNAIHPTFTSFIWVCL
        G LE R VAAFGVGL Y ++AL TQI L NAI P+F+S IWV L
Subjt:  GRLELRFVAAFGVGLAY-LLALNTQIGLGNAIHPTFTSFIWVCL

A0A1S3B4Y8 uncharacterized protein LOC1034862291.6e-5570.27Show/hide
Query:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHV
        MA+GHRRSFKI+VHAKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKSESR+LVQRRRTLKSRMLSFVK+HLGR  SK+P      +ES+ QSWHV
Subjt:  MALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHV

Query:  GRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHF
        G          GVG  YL+AL TQIGL NA+  +F+S IWV L +FV+WL KCK L A+LLL+ L PLLL    TFVHLLHLRHF
Subjt:  GRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLLLIVLLPLLLLPFHTFVHLLHLRHF

A0A5A7TM08 RING-H2 finger protein ATL74-like5.5e-4070.21Show/hide
Query:  VDSVALQ-IAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLL
        +DS A+  +AMA+GHRRSFKI+VHAKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKSESR+LVQRRRTLKSRMLSFVK+HLGR  SK+P      
Subjt:  VDSVALQ-IAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLL

Query:  AESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAI
        +ES+ Q WHVG          GVG  YL+AL TQIGL NA+
Subjt:  AESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAI

A0A5A7TM08 RING-H2 finger protein ATL74-like8.9e-0673.17Show/hide
Query:  QGNRTGN-SSYVGEMNFDAHMVVIMAALLCALIGALGVNSI
        QGNRT N S+YVGE+NFD HM + +AALLC LIGA+GVNSI
Subjt:  QGNRTGN-SSYVGEMNFDAHMVVIMAALLCALIGALGVNSI

A0A5A7TM08 RING-H2 finger protein ATL74-like4.0e-3872.87Show/hide
Query:  GHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHVGRL
        GHRRSFKI+VHAKICNLYIKLKATLKLPS KFQ LLKLDKLLI VDSKSESR+LVQRRRTLKSRMLSFVK+HLGR  SK+P      +ES+ QSWHVG  
Subjt:  GHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSKSESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHVGRL

Query:  ELRFVAAFGVGLAYLLALNTQIGLGNAIH
                GVG  YL+AL TQIGL NA +
Subjt:  ELRFVAAFGVGLAYLLALNTQIGLGNAIH

A0A6J1I6E6 RING-H2 finger protein ATL74-like7.3e-0876.6Show/hide
Query:  METEVVQGNRTGNSS-YVGEMNFDAHMVVIMAALLCALIGALGVNSI
        + TE VQGN T NSS YVGEMN DAHMVVI+AALL ALIGALGVN++
Subjt:  METEVVQGNRTGNSS-YVGEMNFDAHMVVIMAALLCALIGALGVNSI

SwissProt top hitse value%identityAlignment
Q9LZV8 RING-H2 finger protein ATL742.5e-0562.79Show/hide
Query:  GNRT----GNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSI
        GN T    G   Y  +MNFDA+MV+I+AALLCALI ALG+NSI
Subjt:  GNRT----GNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSI

Arabidopsis top hitse value%identityAlignment
AT1G49230.1 RING/U-box superfamily protein1.7e-0457.58Show/hide
Query:  SSYVGEMNFDAHMVVIMAALLCALIGALGVNSI
        S YVG+ NFDA++V++++ LLCAL+ +LG+NSI
Subjt:  SSYVGEMNFDAHMVVIMAALLCALIGALGVNSI

AT5G01880.1 RING/U-box superfamily protein1.8e-0662.79Show/hide
Query:  GNRT----GNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSI
        GN T    G   Y  +MNFDA+MV+I+AALLCALI ALG+NSI
Subjt:  GNRT----GNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSI

AT5G05280.1 RING/U-box superfamily protein4.8e-0453.85Show/hide
Query:  GNRTGNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSI
        G+   N+  +  M  D HMV+I+AALLCALI ALG+NS+
Subjt:  GNRTGNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAGAGGTGGTGCAGGGGAATAGGACGGGTAATTCGTCTTATGTGGGGGAGATGAATTTCGATGCGCACATGGTGGTAATAATGGCGGCCTTATTATGTGCACT
CATTGGAGCCCTTGGAGTGAACTCTATCTGGCAGTGGACGGTGGACAGTGTTGCGCTGCAAATTGCAATGGCGTTAGGTCATCGGCGGTCATTCAAAATAACTGTTCATG
CAAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTCCCTTCCAGGAAATTTCAAGGCCTCCTAAAGCTTGATAAACTACTCATCGGAGTGGATTCCAAA
TCTGAATCTCGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTCAAGAGGCATTTGGGGCGTCGGGGATCTAAAATGCCCCAATACTCATA
CCTACTTGCTGAATCTGAAAATCAATCTTGGCATGTTGGCCGTCTGGAACTAAGGTTTGTGGCTGCTTTTGGTGTTGGATTGGCTTATCTTCTTGCACTCAACACACAGA
TTGGCCTTGGCAATGCCATCCATCCCACCTTCACTTCCTTTATTTGGGTTTGCTTGCTTTTATTTGTTTTATGGCTCCACAAATGTAAGTGCCTTTCGGCAATGCTATTG
CTAATCGTTCTGCTTCCTCTCTTACTCTTACCATTCCATACATTTGTACATCTTTTACATTTACGCCACTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAGAGGTGGTGCAGGGGAATAGGACGGGTAATTCGTCTTATGTGGGGGAGATGAATTTCGATGCGCACATGGTGGTAATAATGGCGGCCTTATTATGTGCACT
CATTGGAGCCCTTGGAGTGAACTCTATCTGGCAGTGGACGGTGGACAGTGTTGCGCTGCAAATTGCAATGGCGTTAGGTCATCGGCGGTCATTCAAAATAACTGTTCATG
CAAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTCCCTTCCAGGAAATTTCAAGGCCTCCTAAAGCTTGATAAACTACTCATCGGAGTGGATTCCAAA
TCTGAATCTCGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTCAAGAGGCATTTGGGGCGTCGGGGATCTAAAATGCCCCAATACTCATA
CCTACTTGCTGAATCTGAAAATCAATCTTGGCATGTTGGCCGTCTGGAACTAAGGTTTGTGGCTGCTTTTGGTGTTGGATTGGCTTATCTTCTTGCACTCAACACACAGA
TTGGCCTTGGCAATGCCATCCATCCCACCTTCACTTCCTTTATTTGGGTTTGCTTGCTTTTATTTGTTTTATGGCTCCACAAATGTAAGTGCCTTTCGGCAATGCTATTG
CTAATCGTTCTGCTTCCTCTCTTACTCTTACCATTCCATACATTTGTACATCTTTTACATTTACGCCACTTTTTATAA
Protein sequenceShow/hide protein sequence
METEVVQGNRTGNSSYVGEMNFDAHMVVIMAALLCALIGALGVNSIWQWTVDSVALQIAMALGHRRSFKITVHAKICNLYIKLKATLKLPSRKFQGLLKLDKLLIGVDSK
SESRILVQRRRTLKSRMLSFVKRHLGRRGSKMPQYSYLLAESENQSWHVGRLELRFVAAFGVGLAYLLALNTQIGLGNAIHPTFTSFIWVCLLLFVLWLHKCKCLSAMLL
LIVLLPLLLLPFHTFVHLLHLRHFL