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HG10020569 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020569
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein
Genome locationChr05:628610..630234
RNA-Seq ExpressionHG10020569
SyntenyHG10020569
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR033275 - E3 ubiquitin-protein ligase MARCH-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036086.1 RING/FYVE/PHD zinc finger superfamily protein isoform 1 [Cucumis melo var. makuwa]3.1e-6995.59Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATID
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATID

XP_004137411.1 uncharacterized protein LOC101217964 [Cucumis sativus]1.4e-6993.53Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

XP_008442459.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo]1.4e-6993.53Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

XP_022948839.1 uncharacterized protein LOC111452382 [Cucurbita moschata]4.9e-6789.93Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ +EP VCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLE+PCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLP PPP  EDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

XP_038895194.1 uncharacterized protein LOC120083491 [Benincasa hispida]2.2e-6791.37Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG T  GSSLESSSSQ SEPPVCAIAVE VDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LSR3 RING-CH-type domain-containing protein6.7e-7093.53Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

A0A1S3B5L6 uncharacterized protein LOC1034862956.7e-7093.53Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

A0A5A7T1I5 RING/FYVE/PHD zinc finger superfamily protein isoform 11.5e-6995.59Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATID
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATID

A0A5D3BIK6 RING/FYVE/PHD zinc finger superfamily protein isoform 36.7e-7093.53Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ SEPPVCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLPVPPP SEDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

A0A6J1GB12 uncharacterized protein LOC1114523822.4e-6789.93Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR
        MGDHMVLCVDRLITPE+LQSLQG TAPGSSLESSSSQ +EP VCAIAVEDVDEH GSEEDPLIQTVECRICQEEDSIKNLE+PCACSGSLK+AHRKCVQR
Subjt:  MGDHMVLCVDRLITPENLQSLQG-TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQR

Query:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ
        WCNEKGDITCEICHQNYQPGYTLP PPP  EDATID+ +
Subjt:  WCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDMRQ

SwissProt top hitse value%identityAlignment
Q0P496 E3 ubiquitin-protein ligase MARCHF49.2e-0838.98Show/hide
Query:  DPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNYQ
        D  ++T  CRIC +      L  PC CSGS++  H  C+ +W +E+G  +CE+C+  YQ
Subjt:  DPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNYQ

Q3TZ87 E3 ubiquitin-protein ligase MARCHF97.0e-0838.71Show/hide
Query:  SEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNYQ
        S  D  ++T +CRIC +      L  PC C GS++  H+ C+ RW +E+G  +CE+C+  YQ
Subjt:  SEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNYQ

Q80TE3 E3 ubiquitin-protein ligase MARCHF41.6e-0736.56Show/hide
Query:  TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNY
        T P +SL SS+   S    C    ED     GS  D  ++T  CRIC +      L  PC C GS+K  H+ C+ +W +E+G  +CE+C+  Y
Subjt:  TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNY

Q86YJ5 E3 ubiquitin-protein ligase MARCHF97.0e-0838.71Show/hide
Query:  SEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNYQ
        S  D  ++T +CRIC +      L  PC C GS++  H+ C+ RW +E+G  +CE+C+  YQ
Subjt:  SEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNYQ

Q9P2E8 E3 ubiquitin-protein ligase MARCHF43.5e-0736.56Show/hide
Query:  TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNY
        T P +SL SS+   S    C    ED     GS  D  ++T  CRIC +      L  PC C GS+K  H+ C+ +W +E+G  +CE+C+  Y
Subjt:  TAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQNY

Arabidopsis top hitse value%identityAlignment
AT3G47550.1 RING/FYVE/PHD zinc finger superfamily protein8.4e-4160.43Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF
        M DH+ LC DRLIT E+L S + +           G+ L SSS   +E P    AV D       EE+PL+Q+VECRICQEEDS KNLE PCAC+GSLK+
Subjt:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF

Query:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE
        AHRKCVQRWCNEKGDITCEICHQ YQ GYT P PPP  E
Subjt:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE

AT3G47550.2 RING/FYVE/PHD zinc finger superfamily protein8.4e-4160.43Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF
        M DH+ LC DRLIT E+L S + +           G+ L SSS   +E P    AV D       EE+PL+Q+VECRICQEEDS KNLE PCAC+GSLK+
Subjt:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF

Query:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE
        AHRKCVQRWCNEKGDITCEICHQ YQ GYT P PPP  E
Subjt:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE

AT3G47550.3 RING/FYVE/PHD zinc finger superfamily protein8.4e-4160.43Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF
        M DH+ LC DRLIT E+L S + +           G+ L SSS   +E P    AV D       EE+PL+Q+VECRICQEEDS KNLE PCAC+GSLK+
Subjt:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF

Query:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE
        AHRKCVQRWCNEKGDITCEICHQ YQ GYT P PPP  E
Subjt:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE

AT3G47550.6 RING/FYVE/PHD zinc finger superfamily protein8.4e-4160.43Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF
        M DH+ LC DRLIT E+L S + +           G+ L SSS   +E P    AV D       EE+PL+Q+VECRICQEEDS KNLE PCAC+GSLK+
Subjt:  MGDHMVLCVDRLITPENLQSLQGT---------APGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKF

Query:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE
        AHRKCVQRWCNEKGDITCEICHQ YQ GYT P PPP  E
Subjt:  AHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSE

AT5G62460.1 RING/FYVE/PHD zinc finger superfamily protein3.0e-3854.97Show/hide
Query:  MGDHMVLCVDRLITPENLQSLQGTAPG--SSLESSSSQISEPPVCAIAVE-------------DVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCAC
        M D      DRL+ PE+L S +G+     SS ESS +Q S       +++             DVD+    EE+PLIQ+VECRICQEEDS+KNLE PC+C
Subjt:  MGDHMVLCVDRLITPENLQSLQGTAPG--SSLESSSSQISEPPVCAIAVE-------------DVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCAC

Query:  SGSLKFAHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDM
        SGSLK+AHRKCVQRWCNEKGD TCEICH++YQPGYT P PPP ++D  ID+
Subjt:  SGSLKFAHRKCVQRWCNEKGDITCEICHQNYQPGYTLPVPPPHSEDATIDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATCACATGGTTTTGTGCGTGGATCGCCTCATTACGCCCGAAAATTTGCAGTCGCTGCAGGGCACTGCTCCAGGATCTTCTTTAGAATCTTCATCTTCTCAAAT
TTCAGAGCCACCTGTTTGTGCTATTGCAGTTGAAGATGTGGATGAACATGGTGGATCCGAAGAAGACCCGCTTATTCAGACAGTTGAATGTCGAATATGTCAGGAAGAGG
ACAGTATCAAGAATTTGGAGGTTCCTTGTGCTTGCAGTGGCAGCTTGAAGTTTGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAGAAGGGAGATATAACTTGTGAA
ATCTGTCATCAGAATTATCAGCCTGGTTATACCTTGCCTGTACCTCCCCCTCACTCGGAAGATGCCACCATTGATATGAGGCAAGTTTTGGTTCACCTAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATCACATGGTTTTGTGCGTGGATCGCCTCATTACGCCCGAAAATTTGCAGTCGCTGCAGGGCACTGCTCCAGGATCTTCTTTAGAATCTTCATCTTCTCAAAT
TTCAGAGCCACCTGTTTGTGCTATTGCAGTTGAAGATGTGGATGAACATGGTGGATCCGAAGAAGACCCGCTTATTCAGACAGTTGAATGTCGAATATGTCAGGAAGAGG
ACAGTATCAAGAATTTGGAGGTTCCTTGTGCTTGCAGTGGCAGCTTGAAGTTTGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAGAAGGGAGATATAACTTGTGAA
ATCTGTCATCAGAATTATCAGCCTGGTTATACCTTGCCTGTACCTCCCCCTCACTCGGAAGATGCCACCATTGATATGAGGCAAGTTTTGGTTCACCTAGTTTAA
Protein sequenceShow/hide protein sequence
MGDHMVLCVDRLITPENLQSLQGTAPGSSLESSSSQISEPPVCAIAVEDVDEHGGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDITCE
ICHQNYQPGYTLPVPPPHSEDATIDMRQVLVHLV