CuGenDBv2

Gene ID	HG10020729
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Down syndrome critical region protein 3 homolog isoform X1
Genome location	Chr05:1922962..1925359
RNA-Seq Expression	HG10020729
Synteny	HG10020729
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0042147 - retrograde transport, endosome to Golgi (biological process) GO:0048768 - root hair cell tip growth (biological process) GO:0005829 - cytosol (cellular component) GO:0010008 - endosome membrane (cellular component) GO:0030904 - retromer complex (cellular component)
InterPro domains	IPR014752 - Arrestin-like, C-terminal IPR028934 - Vacuolar protein sorting protein 26 related

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137506.1 vacuolar protein sorting-associated protein 26C [Cucumis sativus]

1.1e-120

88.37

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKPI IVNRSI V PSGKLASGT EIPFSVILRQPNENLGK+YETFHGTDINIQYLVTVDISRGYLHKSL+AT+EFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPEL+                SDP+TGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIYVILPRLLTCPTVFAGPFSIEF+VYIVITFQSELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

XP_008464938.1 PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cucumis melo]

1.4e-120

88.76

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKPI+IVNRSI VRPSGKLASGT EIPFSVILRQP+ENLGKFYETFHGTDINIQYLVTVDISRGYLHKSL+AT+EFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPEL+                SDPITGELIVETSAV INSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIYVILPRLLTCPTVFAGPFSIEF+VYIVITFQSELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

XP_022924207.1 Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata]

9.0e-120

87.98

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKP+ IVNRSIEVRPSGKL SGTTEIPFSVILRQP+ENLGKFYETFHGTDINIQYLVTV ISRGYLHKSL+ATIEFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPELK                SDPITGEL VE SAVPI+SIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIY ILPRLLTCPTVFAGPFSIEF+VYIVITFQSELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

XP_038895697.1 vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida]

9.6e-122

89.15

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKPI IVNR +EVRPSGKLASGTTEIPFSVILRQPNE LGKFYETFHGTDINIQYLVTVDISRGYLHKSL+ATIEFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        F+ERPLSSEMVIFYITQDTQRHPLLPELK                SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
         ITLPIYVILPRLLTCPTVFAGPFSIEF+VYIVITF+SELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

XP_038895698.1 vacuolar protein sorting-associated protein 26C isoform X2 [Benincasa hispida]

2.9e-126

89.77

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Query:  MHFMGKKVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIV
        MHFMGKKVRGGSAGVIESVYGVIKPI IVNR +EVRPSGKLASGTTEIPFSVILRQPNE LGKFYETFHGTDINIQYLVTVDISRGYLHKSL+ATIEFIV
Subjt:  MHFMGKKVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIV

Query:  ESDTADFLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIA
        ESDTADF+ERPLSSEMVIFYITQDTQRHPLLPELK                SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIA
Subjt:  ESDTADFLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIA

Query:  DGDVCRSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        DGDVCR ITLPIYVILPRLLTCPTVFAGPFSIEF+VYIVITF+SELSKLHPKTDPRTPRLW++I
Subjt:  DGDVCRSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT45 Uncharacterized protein

5.2e-121

88.37

Show/hide

Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKPI IVNRSI V PSGKLASGT EIPFSVILRQPNENLGK+YETFHGTDINIQYLVTVDISRGYLHKSL+AT+EFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPEL+                SDP+TGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIYVILPRLLTCPTVFAGPFSIEF+VYIVITFQSELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

A0A1S3CMM2 Down syndrome critical region protein 3 homolog isoform X1

6.7e-121

88.76

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKPI+IVNRSI VRPSGKLASGT EIPFSVILRQP+ENLGKFYETFHGTDINIQYLVTVDISRGYLHKSL+AT+EFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPEL+                SDPITGELIVETSAV INSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIYVILPRLLTCPTVFAGPFSIEF+VYIVITFQSELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

A0A6J1C810 Down syndrome critical region protein 3 homolog isoform X1

2.2e-116

85.27

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        ++RGGSAGVIESVYGVIKP  IVN+SIEVRPSGKLASGTTEIPFS+ILRQP+E LG+FYETFHGT+INIQYLVTVDISRGYLHKSL+ATIEFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
         LERPLSSEMVIFYITQDTQRHPLLPELK                SDPITGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIYVI PRLLTCPTVFAGPFSIEF+VYIVITFQS LSKLH KTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

A0A6J1E8A3 Down syndrome critical region protein 3 homolog isoform X1

4.4e-120

87.98

Show/hide

Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKP+ IVNRSIEVRPSGKL SGTTEIPFSVILRQP+ENLGKFYETFHGTDINIQYLVTV ISRGYLHKSL+ATIEFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPELK                SDPITGEL VE SAVPI+SIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +ITLPIY ILPRLLTCPTVFAGPFSIEF+VYIVITFQSELSKLHPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

A0A6J1KM64 Down syndrome critical region protein 3 homolog isoform X1

8.2e-119

87.21

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD
        +VRGGSAGVIESVYGVIKPI IVNRSIEVRPSGKL SGTTEIPFSVILRQP+ENLGKFYETFHGTDINIQYLVTV ISRGYLHKSL+ATIEFIVESDTAD
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTAD

Query:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
        FLERPLSSEMVIFYITQDTQRHPLLPELK                SDPITGEL VE SAVPI+SIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR
Subjt:  FLERPLSSEMVIFYITQDTQRHPLLPELK----------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCR

Query:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        +I LPIY ILPRLLTCPTVFAGPFSIEF+VY VITFQSELSK+HPKTDPRTPRLW++I
Subjt:  SITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

SwissProt top hits

e value

%identity

Alignment

O14972 Vacuolar protein sorting-associated protein 26C

4.5e-37

40.71

Show/hide

Query:  SAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLERP
        S GV E+ Y  +KPI I+N +IE+   GK  SG TEIPF   L      +   YET+HG  +NIQY +  D+ R  L K LT T EFIV S        P
Subjt:  SAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLERP

Query:  LSSEMVIFYIT-QDTQRHPLLPE------------LKSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLPIYV
           +  I   T Q+ +   LLP+            + + P+TGEL+VE+S   I S+++ L RVE+    E    + + IQ  QIADGDVCR +++PIY+
Subjt:  LSSEMVIFYIT-QDTQRHPLLPE------------LKSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLPIYV

Query:  ILPRLLTCPTVFAGPFSIEFQVYIVI
        + PRL TCPT+    F +EF+V IV+
Subjt:  ILPRLLTCPTVFAGPFSIEFQVYIVI

O35075 Vacuolar protein sorting-associated protein 26C

4.9e-36

38.46

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Query:  SAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLERP
        S GV E+ Y  +KPI I+N +I+V   GK+ SG TE+PF   L      +   YET+HG  +NIQY +  D+ R  L K LT T EFIV S      +  
Subjt:  SAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLERP

Query:  LSSEMVIFYIT----QDTQRHPLLPEL------------KSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLP
        L+   V F IT    Q+ +    LP+              + P+TGEL+VE S   I SI++ L RVE+    E    + + IQ  QIADGD+CR++++P
Subjt:  LSSEMVIFYIT----QDTQRHPLLPEL------------KSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLP

Query:  IYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSE
        +Y++ PRL TCPT+    F +EF+V +V+   ++
Subjt:  IYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSE

Q54DI8 Vacuolar protein sorting-associated protein 26C

6.9e-30

34.45

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Query:  SAGVIESVYGVIKPIVIVNRSIEV-RPSGKLASGTTEIPFSVILRQ-PNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVE--SDTADF
        S G+ E+ Y  +KPI +++ +I V    GK  +G TE+PF   L   PN+ L   Y+T+HG  +NIQY +  D+ RG L K L+ TIEFIVE  S   + 
Subjt:  SAGVIESVYGVIKPIVIVNRSIEV-RPSGKLASGTTEIPFSVILRQ-PNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVE--SDTADF

Query:  LERPLSSEMVIFYITQDTQ------RHPLLPELK------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVC
        L +     ++ F IT D+           +P  K            ++   G +I+E++   I S+++ L RVE+    +    E + IQ  QIADGD+ 
Subjt:  LERPLSSEMVIFYITQDTQ------RHPLLPELK------------SDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVC

Query:  RSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQ
        R+  +P+Y++ PRL TC +     F IEF+V +VI  +
Subjt:  RSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQ

Q5RF33 Vacuolar protein sorting-associated protein 26C

2.6e-37

41.05

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Query:  SAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLERP
        S GV E+ Y  +KPI I+N +IE+   GK  SG TEIPF   L      +   YET+HG  +NIQY +  D+ R  L K LT T EFIV S      +  
Subjt:  SAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLERP

Query:  LSSEMVIFYIT----QDTQRHPLLPE------------LKSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLP
         S   V F IT    Q+ +   LLP+            + + P+TGEL+VE+S   I S+++ L RVE+    E    + + IQ  QIADGDVCR +++P
Subjt:  LSSEMVIFYIT----QDTQRHPLLPE------------LKSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLP

Query:  IYVILPRLLTCPTVFAGPFSIEFQVYIVI
        IY++ PRL TCPT+    F +EF+V IV+
Subjt:  IYVILPRLLTCPTVFAGPFSIEFQVYIVI

Arabidopsis top hits

e value

%identity

Alignment

AT1G48550.1 Vacuolar protein sorting-associated protein 26

8.2e-95

66.02

Show/hide

Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENL-GKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTA
        +VRGGSAGVIES YGVIKPI IV ++IEV+ SGK+  GTTEIPFS+ LR+P E +  KFYETFHGT+INIQYL+T DI RGYLHK L+AT+EFI+ES   
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENL-GKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTA

Query:  DFLERPLSSEMVIFYITQDTQRHPLLPELKS----------------DPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVC
        D  ERP+  E+VIFYITQDTQRHPLLP++K+                DP++GEL VE S+VPI SIDIHL RVES+I+GERI+TETS+IQ+TQIADGDVC
Subjt:  DFLERPLSSEMVIFYITQDTQRHPLLPELKS----------------DPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVC

Query:  RSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        R++TLPIYV+LPRLL CP+VFAGPFS+EF+V I I+F+S+L+K  PK+DP  PRLW+++
Subjt:  RSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

AT1G48550.2 Vacuolar protein sorting-associated protein 26

2.1e-90

64.48

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Query:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENL-GKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTA
        +VRGGSAGVIES YGVIKPI IV ++IEV+ SGK+  GTTEIPFS+ LR+P E +  KFYETFHGT+INIQ     +I RGYLHK L+AT+EFI+ES   
Subjt:  KVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENL-GKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTA

Query:  DFLERPLSSEMVIFYITQDTQRHPLLPELKS----------------DPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVC
        D  ERP+  E+VIFYITQDTQRHPLLP++K+                DP++GEL VE S+VPI SIDIHL RVES+I+GERI+TETS+IQ+TQIADGDVC
Subjt:  DFLERPLSSEMVIFYITQDTQRHPLLPELKS----------------DPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVC

Query:  RSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI
        R++TLPIYV+LPRLL CP+VFAGPFS+EF+V I I+F+S+L+K  PK+DP  PRLW+++
Subjt:  RSITLPIYVILPRLLTCPTVFAGPFSIEFQVYIVITFQSELSKLHPKTDPRTPRLWVSI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCATTTTATGGGGAAAAAGGTTCGTGGAGGATCTGCGGGAGTTATTGAGTCAGTTTACGGTGTCATCAAGCCTATTGTGATAGTGAATAGGAGCATTGAGGTAAGACC
ATCTGGAAAGCTTGCTTCAGGTACAACCGAGATTCCTTTTTCCGTAATTCTGAGACAGCCAAATGAAAACTTGGGAAAATTTTACGAGACTTTTCATGGAACTGACATAA
ACATTCAGTATTTAGTAACTGTAGATATAAGCAGAGGATACCTGCACAAGTCATTAACTGCCACAATCGAGTTTATAGTTGAAAGTGATACAGCTGATTTCCTTGAGCGG
CCGCTGTCCTCGGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAATTAAAATCAGATCCCATCACTGGTGAATTAATAGTAGAAAC
ATCTGCAGTTCCTATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCTGTTATTCTTGGAGAGAGAATCATAACTGAAACCTCTGTGATCCAAACTACCCAAATAG
CAGATGGAGATGTCTGTCGCAGCATTACTCTGCCTATTTATGTTATACTACCCCGCCTTTTGACTTGCCCAACAGTATTTGCTGGTCCATTTTCAATTGAATTCCAAGTT
TACATCGTTATAACCTTTCAGTCAGAGCTATCAAAGTTACATCCCAAGACTGATCCAAGAACTCCAAGACTATGGGTGAGCATCTCTCTCTGGGATTGTTTGGGCTTTTA
TCTTATTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MHFMGKKVRGGSAGVIESVYGVIKPIVIVNRSIEVRPSGKLASGTTEIPFSVILRQPNENLGKFYETFHGTDINIQYLVTVDISRGYLHKSLTATIEFIVESDTADFLER
PLSSEMVIFYITQDTQRHPLLPELKSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRSITLPIYVILPRLLTCPTVFAGPFSIEFQV
YIVITFQSELSKLHPKTDPRTPRLWVSISLWDCLGFYLI

HG10020729 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome