CuGenDBv2

Gene ID	HG10020731
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	Chr05:1932885..1933319
RNA-Seq Expression	HG10020731
Synteny	HG10020731
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ99038.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]

2.5e-71

96.53

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_008465627.2 PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis melo]

2.5e-71

96.53

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]

2.5e-71

96.53

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Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

1.3e-70

95.83

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Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQH+AATAAAGGGSRKSKK KRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_038895169.1 uncharacterized protein At3g17950 [Benincasa hispida]

1.3e-72

97.92

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Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKT+TAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPA+TE+DTSAAGALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQI1 DDE Tnp4 domain-containing protein

3.0e-70

95.14

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVA DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTS A  LCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

1.2e-71

96.53

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

1.2e-71

96.53

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A5D3BLI7 Putative nuclease HARBI1

1.2e-71

96.53

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQHTAAT  AGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A6J1E8Y2 uncharacterized protein At3g17950

7.9e-71

95.83

Show/hide

Query:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ
        MGVSFPAITFRVPSQNRDQH AATAAAGGGSRKSKK KRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ DQQ
Subjt:  MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQ

Query:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

4.5e-23

44.77

Show/hide

Query:  MGVSFPA---ITFRVPSQNR-DQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG
        MG SF A   + FR  S+       A + A+   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLGE+LEVERRFGD 
Subjt:  MGVSFPA---ITFRVPSQNR-DQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG

Query:  AFYGNA-VDLEGVVAT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG
        A Y +A  +LE  V     DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGICSGG G
Subjt:  AFYGNA-VDLEGVVAT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

3.2e-24

44.77

Show/hide

Query:  MGVSFPA---ITFRVPSQNR-DQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG
        MG SF A   + FR  S+       A + A+   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLGE+LEVERRFGD 
Subjt:  MGVSFPA---ITFRVPSQNR-DQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG

Query:  AFYGNA-VDLEGVVAT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG
        A Y +A  +LE  V     DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGICSGG G
Subjt:  AFYGNA-VDLEGVVAT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG

AT3G17950.2 unknown protein

3.2e-24

44.77

Show/hide

Query:  MGVSFPA---ITFRVPSQNR-DQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG
        MG SF A   + FR  S+       A + A+   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLGE+LEVERRFGD 
Subjt:  MGVSFPA---ITFRVPSQNR-DQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG

Query:  AFYGNA-VDLEGVVAT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG
        A Y +A  +LE  V     DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGICSGG G
Subjt:  AFYGNA-VDLEGVVAT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGGTCAGCTTTCCGGCGATTACTTTTCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCTGCGACGGCCGCCGCAGGCGGCGGTTCCCGCAAGAGCAAGAAGAC
GAAGAGAAAAACGACAACGGCGCCTGCACTGGTTGCAGATCGGAAACGGCGGTGGTGGCGGCTATGTAGGGATGACGGTGTTAAGCCGGCGTCTCTGGGCGAGTTTCTTG
AAGTGGAACGGAGATTTGGTGATGGTGCTTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGACGGATCAACAGAGGAATGGCCGGTCTTTGTTCGCCGATGGA
AGAGTTCTTCCGCCGGCGCAAACCGAGGAGGATACGTCGGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTTACCGGAATTTGCAGCGGCGGTGCCGGTTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGVSFPAITFRVPSQNRDQHTAATAAAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQRNGRSLFADG
RVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

HG10020731 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome