CuGenDBv2

Gene ID	HG10020752
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Arf-GAP domain-containing protein
Genome location	Chr05:2140508..2145629
RNA-Seq Expression	HG10020752
Synteny	HG10020752
Gene Ontology terms	GO:0030308 - negative regulation of cell growth (biological process) GO:0035652 - clathrin-coated vesicle cargo loading (biological process) GO:0050829 - defense response to Gram-negative bacterium (biological process) GO:0060858 - vesicle-mediated transport involved in floral organ abscission (biological process) GO:0060866 - leaf abscission (biological process) GO:0090630 - activation of GTPase activity (biological process) GO:0005768 - endosome (cellular component) GO:0005802 - trans-Golgi network (cellular component) GO:0030136 - clathrin-coated vesicle (cellular component) GO:0005096 - GTPase activator activity (molecular function) GO:0030276 - clathrin binding (molecular function)
InterPro domains	IPR044520 - ADP-ribosylation factor GTPase-activating protein AGD5/15

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137634.2 probable ADP-ribosylation factor GTPase-activating protein AGD15 isoform X1 [Cucumis sativus]

1.9e-53

81.89

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVS+NRT PAPQ+GG  S+YCDSIE GP+ SISKKMRNFSLEEEILTKHV+++TPTV KARGNSLDM+NHMI SAPP+GP+FVKE +PSTK+TN 
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLFKYVQ AKQD SSVIPARWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

XP_008467216.1 PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD15 isoform X1 [Cucumis melo]

6.4e-57

85.04

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKNRT PAPQ+GG RS+YCDS+E GP+ SISKKMRNFSLEEEILTKHV+++TPTV KARGNSLDM+NHMIASAPP+GP+FVKE DPSTK+TN 
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLFKYVQDAK+DCSSVIPARWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

XP_022924081.1 probable ADP-ribosylation factor GTPase-activating protein AGD15 [Cucurbita moschata]

1.4e-48

76.38

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKN+T P PQ+GG R+IYCDSIET PK SISKKMRNFSL+EEILT HV+K+TP V K+RGNSLDMKNHMI  APP+GP+ VK  D STK+TNG
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLF Y+QDAKQD  SV+P RWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

XP_023520134.1 probable ADP-ribosylation factor GTPase-activating protein AGD15 [Cucurbita pepo subsp. pepo]

3.4e-50

78.74

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKN+T P PQ+GGMRSIYCDSIET PK SISKKMRNFSL+EEILTKHV+K+TP V K+RGNSLDMKNHMI  APP+GP+ VK  D STK+TNG
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLF Y+QDAKQD  SV+P RWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

XP_038893973.1 probable ADP-ribosylation factor GTPase-activating protein AGD15 [Benincasa hispida]

5.8e-58

87.4

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEK+WVSKNRT P P +GGMRSIYCDSIETGPK SISKKMRNFSL+EEILTKHV+K+TPTV KARGNSLDMKNHMIASAPP+GP+ VKE DPSTK+TNG
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDL KYVQDAKQDCSSVIPARWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQZ1 Arf-GAP domain-containing protein

9.3e-54

81.89

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVS+NRT PAPQ+GG  S+YCDSIE GP+ SISKKMRNFSLEEEILTKHV+++TPTV KARGNSLDM+NHMI SAPP+GP+FVKE +PSTK+TN 
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLFKYVQ AKQD SSVIPARWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

A0A1S3CUB5 probable ADP-ribosylation factor GTPase-activating protein AGD15 isoform X1

3.1e-57

85.04

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKNRT PAPQ+GG RS+YCDS+E GP+ SISKKMRNFSLEEEILTKHV+++TPTV KARGNSLDM+NHMIASAPP+GP+FVKE DPSTK+TN 
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLFKYVQDAK+DCSSVIPARWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

A0A6J1C7J6 probable ADP-ribosylation factor GTPase-activating protein AGD15

2.5e-46

74.42

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKNR  P PQ+GGMRSIYCDS+E+GPK SI+KKMRNFSLEEEILT+HV+ + PTV KAR NSLDMK+H+   A P+GP+  KE D STK+TNG
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFK--YVQDAKQDCSSVIPARWATFD
        SPDLF   YVQD  QDCSSVIPARWATFD
Subjt:  SPDLFK--YVQDAKQDCSSVIPARWATFD

A0A6J1E8K0 probable ADP-ribosylation factor GTPase-activating protein AGD15

6.9e-49

76.38

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKN+T P PQ+GG R+IYCDSIET PK SISKKMRNFSL+EEILT HV+K+TP V K+RGNSLDMKNHMI  APP+GP+ VK  D STK+TNG
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLF Y+QDAKQD  SV+P RWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

A0A6J1KHN6 probable ADP-ribosylation factor GTPase-activating protein AGD15

9.0e-49

76.38

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Query:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG
        YEEKRWVSKN+T P PQ+GGMR+IYCDSIET PK SISKK RNFSL+EEILT HV+K+TP V K+RGNSLDMKNHMI  APP+GP+ VK  D STK+TNG
Subjt:  YEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVKETDPSTKSTNG

Query:  SPDLFKYVQDAKQDCSSVIPARWATFD
        SPDLF Y+QDAKQD  SV+P RWATFD
Subjt:  SPDLFKYVQDAKQDCSSVIPARWATFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTGGAAGTGGAACTGAAGATGGCCCGCCTACAGAGCAAATGGAGTTGGCCAACACGCGGGTACGAAGAGAAAAGGTGGGTTTCTAAGAACAGAACATGCCCAGCTCC
ACAAATAGGTGGAATGAGAAGTATTTATTGTGATTCGATTGAAACTGGACCCAAATGCTCCATTTCAAAGAAGATGAGGAACTTTTCCCTTGAGGAAGAGATTCTCACAA
AGCACGTGTCAAAATCAACTCCCACAGTAGTAAAAGCACGCGGGAATTCTTTAGATATGAAGAACCATATGATTGCTTCAGCTCCTCCAAAAGGCCCTACATTTGTGAAA
GAAACTGATCCATCAACAAAAAGTACAAATGGATCCCCAGATCTCTTCAAATATGTCCAAGATGCAAAACAGGACTGCTCTAGTGTAATTCCAGCTCGTTGGGCAACTTT
CGACTGTAAGTACTCACTCTAG

mRNA sequence

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Protein sequence

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MVEVELKMARLQSKWSWPTRGYEEKRWVSKNRTCPAPQIGGMRSIYCDSIETGPKCSISKKMRNFSLEEEILTKHVSKSTPTVVKARGNSLDMKNHMIASAPPKGPTFVK
ETDPSTKSTNGSPDLFKYVQDAKQDCSSVIPARWATFDCKYSL

HG10020752 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome