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HG10020801 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020801
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein PXR1
Genome locationChr05:2552827..2554384
RNA-Seq ExpressionHG10020801
SyntenyHG10020801
Gene Ontology termsGO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1178.57Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPP
        EE ++K+KK+KDPAD KDP K+R KLEKLEAKMQALAVKKEE+LKL+HEAEQNA P
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPP
KAG7012203.1 Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1173.53Show/hide
Query:  EEKKEKK--------KKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQN---APPP
        E+KKEKK        KK KDPADKKDP+K+R KLEKLE KMQALAVKKEE+LKLLHEAEQN   APPP
Subjt:  EEKKEKK--------KKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQN---APPP
KAG7019857.1 hypothetical protein SDJN02_18822, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1178.57Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPP
        EE ++K+KK+KDPAD KDP K+R KLEKLEAKMQALAVKKEE+LKL+HEAEQNA P
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPP
XP_008437610.1 PREDICTED: protein PXR1 [Cucumis melo]1.4e-1484.48Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPS
        +E+K+KKKKEK+PADKKDP+K+R KLEKLEAKMQALAVKKEE+LKLLHEAEQN PPPS
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPS
XP_022994123.1 protein PXR1 [Cucurbita maxima]6.6e-1277.42Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQN---APPPSS
        +E ++K+KK KDPADKKDP+K+R KLEKLE KMQALAVKKEE+LKLLHEAEQN   APPPSS
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQN---APPPSS
TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein5.3e-1588.14Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPSS
        EEKK+KKKKEKDPADKKDP+K+R KLEKLE KMQALAVKKEE+LKLLHEAEQN PPPSS
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPSS
A0A1S3AV24 protein PXR16.9e-1584.48Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPS
        +E+K+KKKKEK+PADKKDP+K+R KLEKLEAKMQALAVKKEE+LKLLHEAEQN PPPS
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPS
A0A5D3BJ58 Protein PXR18.7e-1088.64Show/hide
Query:  DKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPS
        DKKDP+K+R KLEKLEAKMQALAVKKEE+LKLLHEAEQN PPPS
Subjt:  DKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPS
A0A6J1E7S6 protein PXR12.3e-1081.82Show/hide
Query:  EKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPP
        EKKEKKK  KDPAD KDP K+R KLEKLE KMQALAVKKEE+LKL+HEAEQNA P
Subjt:  EKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPP
A0A6J1K499 protein PXR13.2e-1277.42Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQN---APPPSS
        +E ++K+KK KDPADKKDP+K+R KLEKLE KMQALAVKKEE+LKLLHEAEQN   APPPSS
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQN---APPPSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein3.8e-1049.25Show/hide
Query:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQ--------NAPPPSS
        ++K +K KKEK+P DKKDP K+++KL+K+E K+QA+ +KK+E++KL+H+AEQ        +APPP++
Subjt:  EEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQ--------NAPPPSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTAAGAAATCAGGGCCACCAGAAATTAGATTACCAAGTCGTGTGGCTGAATTCTCGGCAACCCACAGCAATTTCTGGCCATTGGGTTGCCATATTTATGGAGGA
AAAGAAAGAGAAGAAGAAGAAAGAGAAAGACCCTGCAGATAAGAAAGACCCATCAAAAGTCAGACTGAAGCTTGAGAAGCTTGAAGCCAAGATGCAGGCTTTGGCTGTCA
AGAAAGAAGAGCTCTTGAAACTACTCCATGAAGCTGAACAGAATGCTCCACCACCTTCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTAAGAAATCAGGGCCACCAGAAATTAGATTACCAAGTCGTGTGGCTGAATTCTCGGCAACCCACAGCAATTTCTGGCCATTGGGTTGCCATATTTATGGAGGA
AAAGAAAGAGAAGAAGAAGAAAGAGAAAGACCCTGCAGATAAGAAAGACCCATCAAAAGTCAGACTGAAGCTTGAGAAGCTTGAAGCCAAGATGCAGGCTTTGGCTGTCA
AGAAAGAAGAGCTCTTGAAACTACTCCATGAAGCTGAACAGAATGCTCCACCACCTTCCTCTTGA
Protein sequenceShow/hide protein sequence
MSLRNQGHQKLDYQVVWLNSRQPTAISGHWVAIFMEEKKEKKKKEKDPADKKDPSKVRLKLEKLEAKMQALAVKKEELLKLLHEAEQNAPPPSS